RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 TRAV12-1A0A0B4J245 112 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 A0A0J9YXV3 536 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 COX7A2LO14548 114 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 EREGO14944 169 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 RTL8CO15255 209 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 MALP21145 153 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 HERVK_113P63121 156 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 LINC00242Q5T6M2 205 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 Q6ZRN7 208 aaPredicted RBP4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 LINC00336Q6ZUF6 198 aa4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 CHTOPQ9Y3Y2 248 aaKnown RBP4.39□□□□□ -1.71
CHRNA3-204ENST00000559002 TINCRA0A1B0GVN0 87 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 KRTDAPP60985 99 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 FOXI1Q12951 378 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 CFAP161Q6P656 301 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 KRTAP26-1Q6PEX3 210 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 FAM19A3Q7Z5A8 133 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 C5orf38Q86SI9 138 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 LINC00469Q8N7U9 141 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 CHAC1Q9BUX1 264 aa4.38□□□□□ -1.71
CHRNA3-204ENST00000559002 PKD1P98161 4303 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 IGHV3OR16-9A0A0B4J2B5 98 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 C20orf202A1L168 122 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 C5orf52A6NGY3 159 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 USP17L23D6RBM5 183 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 F8VRH5 84 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 H3BRM9 83 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 SYS1-DBNDD2H3BUS1 97 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 LECT2O14960 151 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 APOMO95445 188 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 IGLC3P0DOY3 106 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 COX6A2Q02221 97 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 ODF1Q14990 250 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 PET117Q6UWS5 81 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 MAPKAPK5-AS1Q8N8E1 139 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 HIST1H2BLQ99880 126 aa4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 MRPL35Q9NZE8 188 aaKnown RBP4.37□□□□□ -1.71
CHRNA3-204ENST00000559002 IGLV4-69A0A075B6H9 119 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 A0A087WTM6 91 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 A0A087WZ39 114 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 IGHV1-58A0A0C4DH39 117 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 C11orf86A6NJI1 115 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 DPM2O94777 84 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 C3orf79P0CE67 100 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 PLNP26678 52 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 TNP2Q05952 138 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 TMEM170BQ5T4T1 132 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 CDKN2A-AS1Q9UH64 79 aa4.36□□□□□ -1.71
CHRNA3-204ENST00000559002 IGLV5-45A0A087WSX0 123 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 hDV102S1A0JD36 115 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 LRCOL1A6NCL2 159 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 ZNF561-AS1K7EIQ3 104 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 IGKCP01834 107 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 ZNF22P17026 224 aaPredicted RBP4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 WFDC2Q14508 124 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 HIGD2BQ4VC39 106 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 SPATA12Q7Z6I5 190 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 LINC01561Q8N1V8 128 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 Q8N814 137 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 C15orf56Q8N910 161 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 OR10D4PQ8NGN7 298 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 ORAOV1Q8WV07 137 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 PMCHL2Q9BQD1 86 aa4.35□□□□□ -1.71
CHRNA3-204ENST00000559002 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 IGHV3-64A0A075B6Q5 118 aa4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 GVQW2A0A096LPI5 108 aaPredicted RBP4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 PRSS2P07478 247 aa4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 SPINK8P0C7L1 97 aa4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 AKR1D1P51857 326 aa4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 HERVK_113P61574 105 aa4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 SPAG11BQ08648 103 aa4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 LINC01545Q5VT33 79 aa4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 TOMM7Q9P0U1 55 aa4.34□□□□□ -1.71
CHRNA3-204ENST00000559002 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
CHRNA3-204ENST00000559002 SMIM1B2RUZ4 78 aa4.33□□□□□ -1.72
CHRNA3-204ENST00000559002 NTN5Q8WTR8 489 aaPredicted RBP4.33□□□□□ -1.72
CHRNA3-204ENST00000559002 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
CHRNA3-204ENST00000559002 DNAH5Q8TE73 4624 aa4.33□□□□□ -1.72
CHRNA3-204ENST00000559002 DYNC1H1Q14204 4646 aaKnown RBP4.33□□□□□ -1.72
CHRNA3-204ENST00000559002 IGLV5-52A0A0A0MRZ9 124 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 SCGB1D1O95968 90 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 CKS1BP61024 79 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 C6orf226Q5I0X4 101 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 Q8IZM0 81 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 C2orf48Q96LS8 159 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 CAMK2N2Q96S95 79 aa4.32□□□□□ -1.72
CHRNA3-204ENST00000559002 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
CHRNA3-204ENST00000559002 NDUFA1O15239 70 aa4.31□□□□□ -1.72
CHRNA3-204ENST00000559002 CXCL5P42830 114 aa4.31□□□□□ -1.72
CHRNA3-204ENST00000559002 CNBPP62633 177 aaKnown RBP4.31□□□□□ -1.72
CHRNA3-204ENST00000559002 SYCNQ0VAF6 134 aa4.31□□□□□ -1.72
CHRNA3-204ENST00000559002 CDPF1Q6NVV7 123 aa4.31□□□□□ -1.72
CHRNA3-204ENST00000559002 CARD19Q96LW7 228 aa4.31□□□□□ -1.72
CHRNA3-204ENST00000559002 PGPEP1Q9NXJ5 209 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms