RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 UBE2D1P51668 147 aa12.23□□□□□ -0.45
RABGGTA-208ENST00000558954 LINC00242Q5T6M2 205 aa12.23□□□□□ -0.45
RABGGTA-208ENST00000558954 KIAA1109Q2LD37 5005 aa12.23□□□□□ -0.45
RABGGTA-208ENST00000558954 ZNF561-AS1K7EIQ3 104 aa12.22□□□□□ -0.45
RABGGTA-208ENST00000558954 HBDP02042 147 aa12.22□□□□□ -0.45
RABGGTA-208ENST00000558954 ZC2HC1BQ5TFG8 222 aa12.22□□□□□ -0.45
RABGGTA-208ENST00000558954 Q6ZSA8 131 aa12.22□□□□□ -0.45
RABGGTA-208ENST00000558954 LRP1BQ9NZR2 4599 aa12.21□□□□□ -0.45
RABGGTA-208ENST00000558954 SCO1O75880 301 aa12.21□□□□□ -0.45
RABGGTA-208ENST00000558954 A0A096LNJ9 63 aa12.2□□□□□ -0.46
RABGGTA-208ENST00000558954 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-208ENST00000558954 SLPIP03973 132 aa12.2□□□□□ -0.46
RABGGTA-208ENST00000558954 SEC11AP67812 179 aa12.2□□□□□ -0.46
RABGGTA-208ENST00000558954 CHCHD1Q96BP2 118 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-208ENST00000558954 IGHV3-64A0A075B6Q5 118 aa12.19□□□□□ -0.46
RABGGTA-208ENST00000558954 XGP55808 180 aa12.19□□□□□ -0.46
RABGGTA-208ENST00000558954 PMCHL1Q16048 86 aa12.19□□□□□ -0.46
RABGGTA-208ENST00000558954 FAM19A3Q7Z5A8 133 aa12.19□□□□□ -0.46
RABGGTA-208ENST00000558954 OR10D4PQ8NGN7 298 aa12.19□□□□□ -0.46
RABGGTA-208ENST00000558954 FAM30AQ9NZY2 134 aa12.19□□□□□ -0.46
RABGGTA-208ENST00000558954 A0A087WZ39 114 aa12.18□□□□□ -0.46
RABGGTA-208ENST00000558954 SPAG11BQ08648 103 aa12.18□□□□□ -0.46
RABGGTA-208ENST00000558954 LINC00526Q96FQ7 95 aa12.18□□□□□ -0.46
RABGGTA-208ENST00000558954 HERVK_113P63121 156 aa12.17□□□□□ -0.46
RABGGTA-208ENST00000558954 COX6A2Q02221 97 aa12.17□□□□□ -0.46
RABGGTA-208ENST00000558954 BAGE3Q86Y29 109 aa12.17□□□□□ -0.46
RABGGTA-208ENST00000558954 ORAOV1Q8WV07 137 aa12.17□□□□□ -0.46
RABGGTA-208ENST00000558954 CARD19Q96LW7 228 aa12.17□□□□□ -0.46
RABGGTA-208ENST00000558954 GEMIN7Q9H840 131 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-208ENST00000558954 IGLV4-69A0A075B6H9 119 aa12.16□□□□□ -0.46
RABGGTA-208ENST00000558954 PMVKQ15126 192 aa12.16□□□□□ -0.46
RABGGTA-208ENST00000558954 ATP5LO75964 103 aa12.15□□□□□ -0.46
RABGGTA-208ENST00000558954 HAMPP81172 84 aa12.15□□□□□ -0.46
RABGGTA-208ENST00000558954 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
RABGGTA-208ENST00000558954 PDZD11Q5EBL8 140 aa12.15□□□□□ -0.46
RABGGTA-208ENST00000558954 SDIM1Q6ZPB5 146 aa12.15□□□□□ -0.46
RABGGTA-208ENST00000558954 LINC01561Q8N1V8 128 aa12.15□□□□□ -0.46
RABGGTA-208ENST00000558954 CST9LQ9H4G1 147 aa12.15□□□□□ -0.46
RABGGTA-208ENST00000558954 PKIGQ9Y2B9 76 aa12.15□□□□□ -0.46
RABGGTA-208ENST00000558954 HSBP1O75506 76 aa12.14□□□□□ -0.47
RABGGTA-208ENST00000558954 C2orf48Q96LS8 159 aa12.14□□□□□ -0.47
RABGGTA-208ENST00000558954 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
RABGGTA-208ENST00000558954 A0A0J9YXV3 536 aa12.13□□□□□ -0.47
RABGGTA-208ENST00000558954 SCXQ7RTU7 201 aa12.13□□□□□ -0.47
RABGGTA-208ENST00000558954 CHAC1Q9BUX1 264 aa12.13□□□□□ -0.47
RABGGTA-208ENST00000558954 HSPG2P98160 4391 aa12.12□□□□□ -0.47
RABGGTA-208ENST00000558954 TINCRA0A1B0GVN0 87 aa12.12□□□□□ -0.47
RABGGTA-208ENST00000558954 F8WDY8 70 aa12.12□□□□□ -0.47
RABGGTA-208ENST00000558954 S100A1P23297 94 aa12.12□□□□□ -0.47
RABGGTA-208ENST00000558954 Q8N1X5 172 aa12.12□□□□□ -0.47
RABGGTA-208ENST00000558954 APOBP04114 4563 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-208ENST00000558954 NDUFA6P56556 154 aa12.11□□□□□ -0.47
RABGGTA-208ENST00000558954 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
RABGGTA-208ENST00000558954 PACRGQ96M98 296 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-208ENST00000558954 CDKN2A-AS1Q9UH64 79 aa12.11□□□□□ -0.47
RABGGTA-208ENST00000558954 ATP6V1G1O75348 118 aa12.1□□□□□ -0.47
RABGGTA-208ENST00000558954 SERF1AO75920 110 aa12.1□□□□□ -0.47
RABGGTA-208ENST00000558954 Q6ZRU5 148 aa12.1□□□□□ -0.47
RABGGTA-208ENST00000558954 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-208ENST00000558954 IGLV5-45A0A087WSX0 123 aa12.09□□□□□ -0.47
RABGGTA-208ENST00000558954 NDUFA1O15239 70 aa12.09□□□□□ -0.47
RABGGTA-208ENST00000558954 CIRBPQ14011 172 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-208ENST00000558954 FAM19A2Q8N3H0 131 aa12.08□□□□□ -0.48
RABGGTA-208ENST00000558954 RYR1P21817 5038 aa12.08□□□□□ -0.48
RABGGTA-208ENST00000558954 PRSS2P07478 247 aa12.07□□□□□ -0.48
RABGGTA-208ENST00000558954 IGLC3P0DOY3 106 aa12.07□□□□□ -0.48
RABGGTA-208ENST00000558954 LINC00310P59036 64 aa12.07□□□□□ -0.48
RABGGTA-208ENST00000558954 CIRBP-AS1Q8TBR5 109 aa12.07□□□□□ -0.48
RABGGTA-208ENST00000558954 IFI27L1Q96BM0 104 aa12.07□□□□□ -0.48
RABGGTA-208ENST00000558954 MRPL35Q9NZE8 188 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-208ENST00000558954 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
RABGGTA-208ENST00000558954 KIAA0087Q14695 138 aa12.06□□□□□ -0.48
RABGGTA-208ENST00000558954 RNF151Q2KHN1 245 aa12.06□□□□□ -0.48
RABGGTA-208ENST00000558954 SPACA4Q8TDM5 124 aa12.06□□□□□ -0.48
RABGGTA-208ENST00000558954 HERC2O95714 4834 aa12.06□□□□□ -0.48
RABGGTA-208ENST00000558954 A0A096LNI7 61 aa12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 IGKV2-24A0A0C4DH68 120 aa12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 H3BRM9 83 aa12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 PANO1I0J062 215 aa12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 Q8IZM0 81 aa12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 TOMM7Q9P0U1 55 aa12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
RABGGTA-208ENST00000558954 SMIM1B2RUZ4 78 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BKO60814 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BJP06899 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BOP23527 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BBP33778 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BDP58876 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BCP62807 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST2H2BEQ16778 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BHQ93079 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BNQ99877 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 HIST1H2BMQ99879 126 aa12.04□□□□□ -0.48
RABGGTA-208ENST00000558954 Q5VSD8 79 aa12.03□□□□□ -0.48
RABGGTA-208ENST00000558954 UNQ6190/PRO20217Q6UXQ8 127 aa12.03□□□□□ -0.48
RABGGTA-208ENST00000558954 DPH3Q96FX2 82 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms