RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 PPBPP02775 128 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 OR10J3Q5JRS4 329 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 C2orf66Q6UXQ4 117 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 CBLN2Q8IUK8 224 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 UBE2DNLQ8IWF7 75 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 FAM104AQ969W3 186 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 C20orf78Q9BR46 151 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 CHCHD7Q9BUK0 85 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 HERC2O95714 4834 aa3.94□□□□□ -1.78
LRRC28-209ENST00000558861 IBA57-AS1B1ANH7 110 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 K7EP13 123 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 M0R2N4 97 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 CKS2P33552 79 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 LINC01620Q4KN68 170 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 MPV17L2Q567V2 206 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 KRTAP26-1Q6PEX3 210 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 KCNIP4Q6PIL6 250 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 ORMDL3Q8N138 153 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 DEFB104AQ8WTQ1 72 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 SMIM2Q9BVW6 85 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 LAMTOR2Q9Y2Q5 125 aa3.93□□□□□ -1.78
LRRC28-209ENST00000558861 TRAV8-6A0A0B4J262 113 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 IGHV1-24A0A0C4DH33 117 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 LINC01546A6NGU7 62 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 COLCA2A8K830 154 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 I3L3M4 83 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 PPP1R17O96001 155 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 HLA-DQA1P01909 254 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 MT-ND6P03923 174 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 S100PP25815 95 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 COTL1Q14019 142 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 LAGE3Q14657 143 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 TMEM97Q5BJF2 176 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 TTC32Q5I0X7 151 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 C20orf203Q8NBC4 194 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 PRELID3AQ96N28 172 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 TMEM243Q9BU79 118 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 ST20Q9HBF5 79 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 PRR34Q9NV39 138 aa3.92□□□□□ -1.78
LRRC28-209ENST00000558861 IGLV4-60A0A075B6I1 120 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 TRBV25-1A0A075B6N4 114 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 SCO1O75880 301 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 IGHV3-30P01768 117 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 IGHV3-33P01772 117 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 IGHV3-30-3P0DP02 117 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 IGHV3-30-5P0DP03 117 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 RBX1P62877 108 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 COX19Q49B96 90 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 ENHOQ6UWT2 76 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 MRPL52Q86TS9 123 aaKnown RBP3.91□□□□□ -1.78
LRRC28-209ENST00000558861 C6orf223Q8N319 242 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 C10orf126Q8N4M7 172 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 Q8N976 141 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 SMCO4Q9NRQ5 59 aa3.91□□□□□ -1.78
LRRC28-209ENST00000558861 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.79
LRRC28-209ENST00000558861 IGKV2-29A2NJV5 120 aaPredicted RBP3.9□□□□□ -1.79
LRRC28-209ENST00000558861 APCSP02743 223 aa3.9□□□□□ -1.79
LRRC28-209ENST00000558861 C1orf134Q5TEV5 83 aa3.9□□□□□ -1.79
LRRC28-209ENST00000558861 CSDC2Q9Y534 153 aaKnown RBP3.9□□□□□ -1.79
LRRC28-209ENST00000558861 LRCOL1A6NCL2 159 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 TCAPO15273 167 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 FGF6P10767 208 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 PMCHP20382 165 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 RPL39P62891 51 aaKnown RBP3.89□□□□□ -1.79
LRRC28-209ENST00000558861 FABP9Q0Z7S8 132 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 WFDC2Q14508 124 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 Q8N8P6 123 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 C18orf32Q8TCD1 76 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 TIMM21Q9BVV7 248 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 KLK12Q9UKR0 248 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 UBE2D4Q9Y2X8 147 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 VPS13BQ7Z7G8 4022 aa3.89□□□□□ -1.79
LRRC28-209ENST00000558861 A0A087WX48 190 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 A0A096LNJ9 63 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 RAB5AP20339 215 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 IFI27P40305 119 aaPredicted RBP3.88□□□□□ -1.79
LRRC28-209ENST00000558861 PKIAP61925 76 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 LINC00336Q6ZUF6 198 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 LINC00269Q8N2A0 174 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.88□□□□□ -1.79
LRRC28-209ENST00000558861 KIR2DL4Q99706 377 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 MAP1LC3AQ9H492 121 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 NXT2Q9NPJ8 142 aaKnown RBP3.88□□□□□ -1.79
LRRC28-209ENST00000558861 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 TRAPPC1Q9Y5R8 145 aa3.88□□□□□ -1.79
LRRC28-209ENST00000558861 TRAV8-3A0A0A6YYJ7 113 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 LOC389332A0A1B0GUA5 103 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 IGIPA6NJ69 53 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 E9PLD3 99 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 TMEM262E9PQX1 116 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 K7EMI3 77 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 ANGP03950 147 aaKnown RBP3.87□□□□□ -1.79
LRRC28-209ENST00000558861 TRGC2P03986 189 aa3.87□□□□□ -1.79
LRRC28-209ENST00000558861 ZNF25P17030 456 aaPredicted RBP3.87□□□□□ -1.79
LRRC28-209ENST00000558861 MRPS36P82909 103 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms