RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 GCSHP23434 173 aa5.03□□□□□ -1.6
SPG11-205ENST00000558080 POLR2KP53803 58 aaKnown RBP5.03□□□□□ -1.6
SPG11-205ENST00000558080 XGP55808 180 aa5.03□□□□□ -1.6
SPG11-205ENST00000558080 LINC01545Q5VT33 79 aa5.03□□□□□ -1.6
SPG11-205ENST00000558080 ZNF664Q8N3J9 261 aa5.03□□□□□ -1.6
SPG11-205ENST00000558080 DNAJC30Q96LL9 226 aa5.03□□□□□ -1.6
SPG11-205ENST00000558080 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
SPG11-205ENST00000558080 IGLV5-52A0A0A0MRZ9 124 aa5.02□□□□□ -1.61
SPG11-205ENST00000558080 HSBP1L1C9JCN9 74 aa5.02□□□□□ -1.61
SPG11-205ENST00000558080 H0Y8G0 127 aa5.02□□□□□ -1.61
SPG11-205ENST00000558080 I3L3M4 83 aa5.02□□□□□ -1.61
SPG11-205ENST00000558080 SPATA45Q537H7 98 aa5.02□□□□□ -1.61
SPG11-205ENST00000558080 DAZ4Q86SG3 579 aaKnown RBP5.02□□□□□ -1.61
SPG11-205ENST00000558080 TOMM6Q96B49 74 aa5.02□□□□□ -1.61
SPG11-205ENST00000558080 PRO1933Q9H354 126 aa5.02□□□□□ -1.61
SPG11-205ENST00000558080 DAZ3Q9NR90 486 aaKnown RBP5.02□□□□□ -1.61
SPG11-205ENST00000558080 PAM16Q9Y3D7 125 aa5.02□□□□□ -1.61
SPG11-205ENST00000558080 SRRM2Q9UQ35 2752 aaKnown RBP5.02□□□□□ -1.61
SPG11-205ENST00000558080 EPM2AB3EWF7 344 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.01□□□□□ -1.61
SPG11-205ENST00000558080 LECT2O14960 151 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 SMR3BP02814 79 aaPredicted RBP5.01□□□□□ -1.61
SPG11-205ENST00000558080 PRSS1P07477 247 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 DDTP30046 118 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 HAMPP81172 84 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 WFDC2Q14508 124 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 C2orf66Q6UXQ4 117 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 Q6ZN92 141 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 ATOH7Q8N100 152 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 Q8N814 137 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 SCGB3A1Q96QR1 104 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 TM2D2Q9BX73 214 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 CYSLTR1Q9Y271 337 aa5.01□□□□□ -1.61
SPG11-205ENST00000558080 TRAV8-3A0A0A6YYJ7 113 aa5□□□□□ -1.61
SPG11-205ENST00000558080 TRAV12-1A0A0B4J245 112 aa5□□□□□ -1.61
SPG11-205ENST00000558080 TRBV10-1A0A0K0K1A3 114 aa5□□□□□ -1.61
SPG11-205ENST00000558080 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
SPG11-205ENST00000558080 ERASQ7Z444 233 aa5□□□□□ -1.61
SPG11-205ENST00000558080 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
SPG11-205ENST00000558080 TMEM141Q96I45 108 aa5□□□□□ -1.61
SPG11-205ENST00000558080 TRBV7-3A0A075B6L6 115 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 LINC00587B1AMM8 73 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 TSHBP01222 138 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 UBE2D3P61077 147 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 UBE2D2P62837 147 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 NEXN-AS1Q8NBZ9 246 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 BAALCQ8WXS3 180 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 TIMM17AQ99595 171 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 MIEN1Q9BRT3 115 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 UQCR10Q9UDW1 63 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 KLK12Q9UKR0 248 aa4.99□□□□□ -1.61
SPG11-205ENST00000558080 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.98□□□□□ -1.61
SPG11-205ENST00000558080 IGKV2D-24A0A075B6R9 120 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 A0A087WX48 190 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 TMEM262E9PQX1 116 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 DPM2O94777 84 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 IGKCP01834 107 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 INAFM2P0DMQ5 153 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 PLNP26678 52 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 COTL1Q14019 142 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 ODF1Q14990 250 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 Q5VSD8 79 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 C20orf203Q8NBC4 194 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 UBE2WQ96B02 151 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 PMCHL2Q9BQD1 86 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 FAM30AQ9NZY2 134 aa4.98□□□□□ -1.61
SPG11-205ENST00000558080 TRBV6-8A0A0A6YYG3 113 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 hDV102S1A0JD36 115 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 IGIPA6NJ69 53 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 F8VRH5 84 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 NPSP0C0P6 89 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 IGLC3P0DOY3 106 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 MAJINQ3KP22 176 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 PAPPA-AS1Q5QFB9 102 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 RMI2Q96E14 147 aa4.97□□□□□ -1.61
SPG11-205ENST00000558080 CHTOPQ9Y3Y2 248 aaKnown RBP4.97□□□□□ -1.61
SPG11-205ENST00000558080 FAT1Q14517 4588 aa4.96□□□□□ -1.62
SPG11-205ENST00000558080 RPL39P62891 51 aaKnown RBP4.96□□□□□ -1.62
SPG11-205ENST00000558080 SMAGPQ0VAQ4 97 aa4.96□□□□□ -1.62
SPG11-205ENST00000558080 PMVKQ15126 192 aa4.96□□□□□ -1.62
SPG11-205ENST00000558080 LINC01620Q4KN68 170 aa4.96□□□□□ -1.62
SPG11-205ENST00000558080 MRPL52Q86TS9 123 aaKnown RBP4.96□□□□□ -1.62
SPG11-205ENST00000558080 CHCHD5Q9BSY4 110 aa4.96□□□□□ -1.62
SPG11-205ENST00000558080 SPANXA1Q9NS26 97 aa4.96□□□□□ -1.62
SPG11-205ENST00000558080 MRPL35Q9NZE8 188 aaKnown RBP4.96□□□□□ -1.62
SPG11-205ENST00000558080 PYGO1Q9Y3Y4 419 aa4.96□□□□□ -1.62
SPG11-205ENST00000558080 COX11Q9Y6N1 276 aa4.96□□□□□ -1.62
SPG11-205ENST00000558080 ANGP03950 147 aaKnown RBP4.95□□□□□ -1.62
SPG11-205ENST00000558080 HNRNPA3P51991 378 aaKnown RBP4.95□□□□□ -1.62
SPG11-205ENST00000558080 MPV17L2Q567V2 206 aa4.95□□□□□ -1.62
SPG11-205ENST00000558080 SLC25A34Q6PIV7 304 aa4.95□□□□□ -1.62
SPG11-205ENST00000558080 NTM-AS1Q6ZSK4 140 aa4.95□□□□□ -1.62
SPG11-205ENST00000558080 C14orf144Q96I85 54 aa4.95□□□□□ -1.62
SPG11-205ENST00000558080 CHCHD7Q9BUK0 85 aa4.95□□□□□ -1.62
SPG11-205ENST00000558080 CRPP02741 224 aa4.94□□□□□ -1.62
SPG11-205ENST00000558080 COX8AP10176 69 aa4.94□□□□□ -1.62
SPG11-205ENST00000558080 GAGE6Q13070 117 aa4.94□□□□□ -1.62
SPG11-205ENST00000558080 TMEM97Q5BJF2 176 aa4.94□□□□□ -1.62
SPG11-205ENST00000558080 ENHOQ6UWT2 76 aa4.94□□□□□ -1.62
SPG11-205ENST00000558080 DEFB104AQ8WTQ1 72 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms