RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CHAC1Q9BUX1 264 aa8.37□□□□□ -1.07
TPM1-209ENST00000558072 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
TPM1-209ENST00000558072 APOMO95445 188 aa8.36□□□□□ -1.07
TPM1-209ENST00000558072 CFAP161Q6P656 301 aa8.36□□□□□ -1.07
TPM1-209ENST00000558072 IGKV2D-24A0A075B6R9 120 aa8.35□□□□□ -1.07
TPM1-209ENST00000558072 IGLV5-45A0A087WSX0 123 aa8.35□□□□□ -1.07
TPM1-209ENST00000558072 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
TPM1-209ENST00000558072 COX7A2LO14548 114 aa8.35□□□□□ -1.07
TPM1-209ENST00000558072 MALP21145 153 aa8.35□□□□□ -1.07
TPM1-209ENST00000558072 TMEM170BQ5T4T1 132 aa8.35□□□□□ -1.07
TPM1-209ENST00000558072 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
TPM1-209ENST00000558072 LINC00469Q8N7U9 141 aa8.35□□□□□ -1.07
TPM1-209ENST00000558072 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
TPM1-209ENST00000558072 A0A087WZ39 114 aa8.34□□□□□ -1.07
TPM1-209ENST00000558072 XCL1P47992 114 aa8.34□□□□□ -1.07
TPM1-209ENST00000558072 ZC2HC1BQ5TFG8 222 aa8.34□□□□□ -1.07
TPM1-209ENST00000558072 Q9HAA7 133 aa8.34□□□□□ -1.07
TPM1-209ENST00000558072 HYDINQ4G0P3 5121 aa8.34□□□□□ -1.07
TPM1-209ENST00000558072 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
TPM1-209ENST00000558072 LOC105371267A0A1B0GV96 52 aa8.33□□□□□ -1.08
TPM1-209ENST00000558072 PSCAO43653 123 aa8.33□□□□□ -1.08
TPM1-209ENST00000558072 SMIM6P0DI80 62 aa8.33□□□□□ -1.08
TPM1-209ENST00000558072 S100A12P80511 92 aa8.33□□□□□ -1.08
TPM1-209ENST00000558072 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
TPM1-209ENST00000558072 KRTAP1-5Q9BYS1 174 aa8.33□□□□□ -1.08
TPM1-209ENST00000558072 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
TPM1-209ENST00000558072 GAGE12HA6NDE8 117 aa8.32□□□□□ -1.08
TPM1-209ENST00000558072 M0R2N4 97 aa8.32□□□□□ -1.08
TPM1-209ENST00000558072 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
TPM1-209ENST00000558072 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
TPM1-209ENST00000558072 IGHV1-58A0A0C4DH39 117 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 LCE6AA0A183 80 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 FOXI1Q12951 378 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 C14orf177Q52M58 125 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 Q6ZR54 194 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 PMCHL2Q9BQD1 86 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
TPM1-209ENST00000558072 RYR2Q92736 4967 aa8.3□□□□□ -1.08
TPM1-209ENST00000558072 F8WDY8 70 aa8.3□□□□□ -1.08
TPM1-209ENST00000558072 PRSS2P07478 247 aa8.3□□□□□ -1.08
TPM1-209ENST00000558072 PYY3Q5JQD4 70 aa8.3□□□□□ -1.08
TPM1-209ENST00000558072 C1orf134Q5TEV5 83 aa8.3□□□□□ -1.08
TPM1-209ENST00000558072 VAMP8Q9BV40 100 aa8.3□□□□□ -1.08
TPM1-209ENST00000558072 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
TPM1-209ENST00000558072 TMEM223A0PJW6 202 aa8.29□□□□□ -1.08
TPM1-209ENST00000558072 COX6A2Q02221 97 aa8.29□□□□□ -1.08
TPM1-209ENST00000558072 C5orf38Q86SI9 138 aa8.29□□□□□ -1.08
TPM1-209ENST00000558072 E9PLD3 99 aa8.28□□□□□ -1.08
TPM1-209ENST00000558072 CXCL5P42830 114 aa8.28□□□□□ -1.08
TPM1-209ENST00000558072 IGHV3-64A0A075B6Q5 118 aa8.27□□□□□ -1.09
TPM1-209ENST00000558072 LEPROTO15243 131 aa8.27□□□□□ -1.09
TPM1-209ENST00000558072 NMUP48645 174 aa8.27□□□□□ -1.09
TPM1-209ENST00000558072 KRTAP26-1Q6PEX3 210 aa8.27□□□□□ -1.09
TPM1-209ENST00000558072 Q8IZM0 81 aa8.27□□□□□ -1.09
TPM1-209ENST00000558072 KMT2CQ8NEZ4 4911 aaKnown RBP8.26□□□□□ -1.09
TPM1-209ENST00000558072 IGLV5-39A0A0G2JS06 123 aa8.26□□□□□ -1.09
TPM1-209ENST00000558072 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
TPM1-209ENST00000558072 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
TPM1-209ENST00000558072 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
TPM1-209ENST00000558072 EREGO14944 169 aa8.26□□□□□ -1.09
TPM1-209ENST00000558072 LGALS3P17931 250 aaKnown RBP8.26□□□□□ -1.09
TPM1-209ENST00000558072 C6orf226Q5I0X4 101 aa8.26□□□□□ -1.09
TPM1-209ENST00000558072 ATOH7Q8N100 152 aa8.26□□□□□ -1.09
TPM1-209ENST00000558072 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
TPM1-209ENST00000558072 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
TPM1-209ENST00000558072 ORAOV1Q8WV07 137 aa8.25□□□□□ -1.09
TPM1-209ENST00000558072 J3QQQ9 107 aa8.24□□□□□ -1.09
TPM1-209ENST00000558072 CKS1BP61024 79 aa8.24□□□□□ -1.09
TPM1-209ENST00000558072 HERV-K104P63124 156 aa8.24□□□□□ -1.09
TPM1-209ENST00000558072 STPG4Q8N801 248 aa8.24□□□□□ -1.09
TPM1-209ENST00000558072 C2orf48Q96LS8 159 aa8.24□□□□□ -1.09
TPM1-209ENST00000558072 PKIGQ9Y2B9 76 aa8.24□□□□□ -1.09
TPM1-209ENST00000558072 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
TPM1-209ENST00000558072 MYMXA0A1B0GTQ4 84 aa8.23□□□□□ -1.09
TPM1-209ENST00000558072 hDV102S1A0JD36 115 aa8.23□□□□□ -1.09
TPM1-209ENST00000558072 GCSHP23434 173 aa8.23□□□□□ -1.09
TPM1-209ENST00000558072 SPAG11BQ08648 103 aa8.23□□□□□ -1.09
TPM1-209ENST00000558072 SPATA45Q537H7 98 aa8.23□□□□□ -1.09
TPM1-209ENST00000558072 TOMM7Q9P0U1 55 aa8.23□□□□□ -1.09
TPM1-209ENST00000558072 KMT2AQ03164 3969 aa8.22□□□□□ -1.09
TPM1-209ENST00000558072 USP17L23D6RBM5 183 aa8.22□□□□□ -1.09
TPM1-209ENST00000558072 PAM16Q9Y3D7 125 aa8.22□□□□□ -1.09
TPM1-209ENST00000558072 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.21□□□□□ -1.1
TPM1-209ENST00000558072 NDUFA1O15239 70 aa8.21□□□□□ -1.1
TPM1-209ENST00000558072 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
TPM1-209ENST00000558072 C12orf57Q99622 126 aa8.21□□□□□ -1.1
TPM1-209ENST00000558072 RYR3Q15413 4870 aa8.2□□□□□ -1.1
TPM1-209ENST00000558072 DLEU1O43261 78 aa8.2□□□□□ -1.1
TPM1-209ENST00000558072 CIRBPQ14011 172 aaKnown RBP8.2□□□□□ -1.1
TPM1-209ENST00000558072 LINC00336Q6ZUF6 198 aa8.2□□□□□ -1.1
TPM1-209ENST00000558072 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
TPM1-209ENST00000558072 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
TPM1-209ENST00000558072 COX8AP10176 69 aa8.19□□□□□ -1.1
TPM1-209ENST00000558072 RNF151Q2KHN1 245 aa8.19□□□□□ -1.1
TPM1-209ENST00000558072 ANKRD39Q53RE8 183 aa8.19□□□□□ -1.1
TPM1-209ENST00000558072 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
TPM1-209ENST00000558072 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
TPM1-209ENST00000558072 CAMK2N2Q96S95 79 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms