RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
TMEM260-215ENST00000557626 FCER1GP30273 86 aa8.26□□□□□ -1.09
TMEM260-215ENST00000557626 RBX1P62877 108 aa8.26□□□□□ -1.09
TMEM260-215ENST00000557626 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
TMEM260-215ENST00000557626 CHCHD5Q9BSY4 110 aa8.26□□□□□ -1.09
TMEM260-215ENST00000557626 C1orf196B1AJZ1 125 aa8.25□□□□□ -1.09
TMEM260-215ENST00000557626 K7EMI3 77 aa8.25□□□□□ -1.09
TMEM260-215ENST00000557626 FGF6P10767 208 aa8.25□□□□□ -1.09
TMEM260-215ENST00000557626 PMCHL1Q16048 86 aa8.25□□□□□ -1.09
TMEM260-215ENST00000557626 MRPL52Q86TS9 123 aaKnown RBP8.25□□□□□ -1.09
TMEM260-215ENST00000557626 DPH3Q96FX2 82 aa8.25□□□□□ -1.09
TMEM260-215ENST00000557626 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
TMEM260-215ENST00000557626 COA6Q5JTJ3 125 aaKnown RBP8.24□□□□□ -1.09
TMEM260-215ENST00000557626 RNASEKQ6P5S7 137 aaKnown RBP8.24□□□□□ -1.09
TMEM260-215ENST00000557626 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
TMEM260-215ENST00000557626 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
TMEM260-215ENST00000557626 AP5S1Q9NUS5 200 aa8.24□□□□□ -1.09
TMEM260-215ENST00000557626 A0A1B0GUV1 79 aa8.23□□□□□ -1.09
TMEM260-215ENST00000557626 IGIPA6NJ69 53 aa8.23□□□□□ -1.09
TMEM260-215ENST00000557626 H7C423 109 aa8.23□□□□□ -1.09
TMEM260-215ENST00000557626 ORMDL2Q53FV1 153 aa8.23□□□□□ -1.09
TMEM260-215ENST00000557626 C2orf66Q6UXQ4 117 aa8.23□□□□□ -1.09
TMEM260-215ENST00000557626 BAGE3Q86Y29 109 aa8.23□□□□□ -1.09
TMEM260-215ENST00000557626 C9orf163Q8N9P6 203 aa8.23□□□□□ -1.09
TMEM260-215ENST00000557626 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
TMEM260-215ENST00000557626 A0A087WYN8 130 aa8.22□□□□□ -1.09
TMEM260-215ENST00000557626 CIRBPQ14011 172 aaKnown RBP8.22□□□□□ -1.09
TMEM260-215ENST00000557626 PDZD11Q5EBL8 140 aa8.22□□□□□ -1.09
TMEM260-215ENST00000557626 FAM19A2Q8N3H0 131 aa8.22□□□□□ -1.09
TMEM260-215ENST00000557626 TOMM6Q96B49 74 aa8.22□□□□□ -1.09
TMEM260-215ENST00000557626 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
TMEM260-215ENST00000557626 TMEM262E9PQX1 116 aa8.21□□□□□ -1.1
TMEM260-215ENST00000557626 NDUFA6P56556 154 aa8.21□□□□□ -1.1
TMEM260-215ENST00000557626 ENHOQ6UWT2 76 aa8.21□□□□□ -1.1
TMEM260-215ENST00000557626 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.1
TMEM260-215ENST00000557626 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
TMEM260-215ENST00000557626 CDC42SE2Q9NRR3 84 aa8.21□□□□□ -1.1
TMEM260-215ENST00000557626 PRR34Q9NV39 138 aa8.21□□□□□ -1.1
TMEM260-215ENST00000557626 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
TMEM260-215ENST00000557626 RAB5BP61020 215 aa8.2□□□□□ -1.1
TMEM260-215ENST00000557626 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
TMEM260-215ENST00000557626 ZC2HC1BQ5TFG8 222 aa8.2□□□□□ -1.1
TMEM260-215ENST00000557626 Q6ZUT4 128 aa8.2□□□□□ -1.1
TMEM260-215ENST00000557626 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
TMEM260-215ENST00000557626 CYSLTR1Q9Y271 337 aa8.2□□□□□ -1.1
TMEM260-215ENST00000557626 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
TMEM260-215ENST00000557626 IGLV4-3A0A075B6K6 122 aa8.19□□□□□ -1.1
TMEM260-215ENST00000557626 A0A087WX48 190 aa8.19□□□□□ -1.1
TMEM260-215ENST00000557626 ZNF25P17030 456 aaPredicted RBP8.19□□□□□ -1.1
TMEM260-215ENST00000557626 DGAT2L7PQ6IED9 249 aa8.19□□□□□ -1.1
TMEM260-215ENST00000557626 KRTAP26-1Q6PEX3 210 aa8.19□□□□□ -1.1
TMEM260-215ENST00000557626 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
TMEM260-215ENST00000557626 UBE2L6O14933 153 aa8.18□□□□□ -1.1
TMEM260-215ENST00000557626 HBDP02042 147 aa8.18□□□□□ -1.1
TMEM260-215ENST00000557626 ANGP03950 147 aaKnown RBP8.18□□□□□ -1.1
TMEM260-215ENST00000557626 LINC01547P58512 204 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-215ENST00000557626 MRPS36P82909 103 aaKnown RBP8.18□□□□□ -1.1
TMEM260-215ENST00000557626 AMMECR1LQ6DCA0 310 aa8.18□□□□□ -1.1
TMEM260-215ENST00000557626 LINC00269Q8N2A0 174 aa8.18□□□□□ -1.1
TMEM260-215ENST00000557626 MUC17Q685J3 4493 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 HSBP1O75506 76 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 PKIAP61925 76 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 CLPSL2Q6UWE3 100 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 ERASQ7Z444 233 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 ZNF664Q8N3J9 261 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 OR5A1Q8NGJ0 315 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 TMEM18Q96B42 140 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 SCGB3A1Q96QR1 104 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 AMELXQ99217 191 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
TMEM260-215ENST00000557626 IFITM10A6NMD0 228 aa8.16□□□□□ -1.1
TMEM260-215ENST00000557626 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
TMEM260-215ENST00000557626 PRSS1P07477 247 aa8.15□□□□□ -1.1
TMEM260-215ENST00000557626 CHTF8P0CG12 524 aa8.15□□□□□ -1.1
TMEM260-215ENST00000557626 REG3AQ06141 175 aa8.15□□□□□ -1.1
TMEM260-215ENST00000557626 UBE2WQ96B02 151 aa8.15□□□□□ -1.1
TMEM260-215ENST00000557626 PLAC8Q9NZF1 115 aa8.15□□□□□ -1.1
TMEM260-215ENST00000557626 LINC00959A0A1B0GUT2 108 aa8.14□□□□□ -1.11
TMEM260-215ENST00000557626 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
TMEM260-215ENST00000557626 NPSP0C0P6 89 aa8.14□□□□□ -1.11
TMEM260-215ENST00000557626 G0S2P27469 103 aa8.14□□□□□ -1.11
TMEM260-215ENST00000557626 HIST3H2BBQ8N257 126 aa8.14□□□□□ -1.11
TMEM260-215ENST00000557626 SPACA4Q8TDM5 124 aa8.14□□□□□ -1.11
TMEM260-215ENST00000557626 TMEM141Q96I45 108 aa8.14□□□□□ -1.11
TMEM260-215ENST00000557626 TMEM101Q96IK0 257 aa8.14□□□□□ -1.11
TMEM260-215ENST00000557626 C5orf52A6NGY3 159 aa8.13□□□□□ -1.11
TMEM260-215ENST00000557626 SNRPEP62304 92 aaKnown RBP8.13□□□□□ -1.11
TMEM260-215ENST00000557626 SRSF9Q13242 221 aaKnown RBP eCLIP8.13□□□□□ -1.11
TMEM260-215ENST00000557626 IGLV10-54A0A075B6I4 117 aa8.12□□□□□ -1.11
TMEM260-215ENST00000557626 IGKV3OR2-268A0A0C4DH90 116 aa8.12□□□□□ -1.11
TMEM260-215ENST00000557626 FABP4P15090 132 aa8.12□□□□□ -1.11
TMEM260-215ENST00000557626 CST9LQ9H4G1 147 aa8.12□□□□□ -1.11
TMEM260-215ENST00000557626 TRAV13-1A0A0B4J241 112 aa8.11□□□□□ -1.11
TMEM260-215ENST00000557626 LINC01549A6NIU2 74 aa8.11□□□□□ -1.11
TMEM260-215ENST00000557626 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.11□□□□□ -1.11
TMEM260-215ENST00000557626 ATP5LO75964 103 aa8.11□□□□□ -1.11
TMEM260-215ENST00000557626 UBE2D1P51668 147 aa8.11□□□□□ -1.11
TMEM260-215ENST00000557626 COX6A2Q02221 97 aa8.11□□□□□ -1.11
TMEM260-215ENST00000557626 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
TMEM260-215ENST00000557626 LINC00242Q5T6M2 205 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms