RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 CHD9Q3L8U1 2897 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 CACNA1HO95180 2353 aa1.76□□□□□ -2.13
FOXN3-217ENST00000557572 PLIN4Q96Q06 1357 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 KNDC1Q76NI1 1749 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 TIAM2Q8IVF5 1701 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 MYOFQ9NZM1 2061 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 IGKV3-7A0A075B6H7 116 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 PIGBOS1A0A0B4J2F0 54 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 H3BRM9 83 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 SYS1-DBNDD2H3BUS1 97 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 PDCD5O14737 125 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 SIX6O95475 246 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 KRTDAPP60985 99 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 DEFA5Q01523 94 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 WFDC2Q14508 124 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 KRTAP13-2Q52LG2 175 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 TRGV9Q99603 122 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 BPESC1Q9GZL8 116 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 CYP4F30PQ9H0H9 118 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 ST20Q9HBF5 79 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 HIGD1BQ9P298 99 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 LRBAP50851 2863 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 EP300Q09472 2414 aaPredicted RBP1.75□□□□□ -2.13
FOXN3-217ENST00000557572 LAMA5O15230 3695 aa1.75□□□□□ -2.13
FOXN3-217ENST00000557572 EDC4Q6P2E9 1401 aaKnown RBP1.74□□□□□ -2.13
FOXN3-217ENST00000557572 ATRQ13535 2644 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 MED13Q9UHV7 2174 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 SPG11Q96JI7 2443 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 IGLV4-60A0A075B6I1 120 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 TRBV6-8A0A0A6YYG3 113 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 TRBV10-1A0A0K0K1A3 114 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 CLPSL1A2RUU4 121 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 NUPR2A6NF83 97 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 UBE2D1P51668 147 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 ELOBQ15370 118 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 KRTAP21-3Q3LHN1 58 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 ETDBQ3ZM63 59 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 Q5VV11 94 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 MED12LQ86YW9 2145 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 MGST2Q99735 147 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 SMCO4Q9NRQ5 59 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 WDFY3Q8IZQ1 3526 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 SIP14410 1827 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 LAMA1P25391 3075 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 CELSR1Q9NYQ6 3014 aa1.74□□□□□ -2.13
FOXN3-217ENST00000557572 PLXNA1Q9UIW2 1896 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 BTAF1O14981 1849 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 NBEAL2Q6ZNJ1 2754 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 TLN1Q9Y490 2541 aaKnown RBP1.73□□□□□ -2.13
FOXN3-217ENST00000557572 CENPEQ02224 2701 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 A0A0G2JND7 137 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 A0A1W2PPM0 123 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 SDHAF1A6NFY7 115 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 H7BZZ5 65 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 IGLC2P0DOY2 106 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 IGLC3P0DOY3 106 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 UBE2D3P61077 147 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 UBE2D2P62837 147 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 ADIRFQ15847 76 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 NMSQ5H8A3 153 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 BVES-AS1Q5T3Y7 98 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 NXT2Q9NPJ8 142 aaKnown RBP1.73□□□□□ -2.13
FOXN3-217ENST00000557572 MANBALQ9NQG1 85 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 MRPL36Q9P0J6 103 aaKnown RBP1.73□□□□□ -2.13
FOXN3-217ENST00000557572 ORMDL1Q9P0S3 153 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 XRN1Q8IZH2 1706 aaKnown RBP1.73□□□□□ -2.13
FOXN3-217ENST00000557572 DLG5Q8TDM6 1919 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 ZGRF1Q86YA3 2104 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 KIF1AQ12756 1690 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 NHSQ6T4R5 1651 aa1.73□□□□□ -2.13
FOXN3-217ENST00000557572 UNC13CQ8NB66 2214 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 COL1A2P08123 1366 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 SCN11AQ9UI33 1791 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 STAB1Q9NY15 2570 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 ITSN1Q15811 1721 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 TRBV7-3A0A075B6L6 115 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 TRAV22A0A0B4J277 110 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 CFDP00746 253 aaPredicted RBP1.72□□□□□ -2.13
FOXN3-217ENST00000557572 EFNA4P52798 201 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 LINC00315P59091 139 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 MPV17LQ2QL34 196 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 C10orf128Q5T292 105 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 CYP2G1PQ6ZSU1 146 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 Q8N6K4 173 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 EXPH5Q8NEV8 1989 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 PCNX1Q96RV3 2341 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 CDC42BPGQ6DT37 1551 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 ESPL1Q14674 2120 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 MGAQ8IWI9 3026 aa1.72□□□□□ -2.13
FOXN3-217ENST00000557572 NRXN2Q9P2S2 1712 aa1.71□□□□□ -2.13
FOXN3-217ENST00000557572 BOD1L1Q8NFC6 3051 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 FBN1P35555 2871 aaKnown RBP1.71□□□□□ -2.14
FOXN3-217ENST00000557572 MTORP42345 2549 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 C10orf142B7Z368 130 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 IGLV3-1P01715 115 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 RNASE3P12724 160 aaKnown RBP1.71□□□□□ -2.14
FOXN3-217ENST00000557572 SFTA2Q6UW10 78 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 ZNF818PQ6ZRF7 136 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 VMO1Q7Z5L0 202 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms