RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 KLK9Q9UKQ9 250 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 HSPB11Q9Y547 144 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 TRBV6-7A0A0A0MS04 114 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 TRGV4A0A0C4DH28 118 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 SDCBPO00560 298 aaPredicted RBP2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 GGCTO75223 188 aaKnown RBP2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 PMP2P02689 132 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 RHOGP84095 191 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 DIAPH2-AS1Q14236 149 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 MSMO1Q15800 293 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 Q6ZQT0 140 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 ARL11Q969Q4 196 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 S100A13Q99584 98 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 TIMM21Q9BVV7 248 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 MRPL32Q9BYC8 188 aaKnown RBP2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 BANF2Q9H503 90 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 Q9H521 79 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 TAF9BQ9HBM6 251 aa2.38□□□□□ -2.03
MTHFD1-216ENST00000557539 PNMA8CA0A1B0GUJ8 204 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 C7orf71A4D174 169 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 M0R2T5 61 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 PDCD5O14737 125 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 SAA2P0DJI9 122 aaPredicted RBP2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 HIST1H1DP16402 221 aaKnown RBP2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 ZNF345Q14585 488 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 TOMM20LQ6UXN7 152 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 C6orf201Q7Z4U5 140 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 OR2T10Q8NGZ9 312 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 OR4K15Q8NH41 348 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 TMEM203Q969S6 136 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 ARHGAP5-AS1Q96IT6 56 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 PRADC1Q9BSG0 188 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 LAMTOR3Q9UHA4 124 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 TRAPPC2LQ9UL33 140 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 HILPDAQ9Y5L2 63 aa2.37□□□□□ -2.03
MTHFD1-216ENST00000557539 A0A087WTM6 91 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 ZNF705FA8MVS1 300 aaPredicted RBP2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 ZNF736B4DX44 427 aaPredicted RBP2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 SCTP09683 121 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 RTL8BQ17RB0 113 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 SOSTDC1Q6X4U4 206 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 TCTEX1D1Q8N7M0 179 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 LEAP2Q969E1 77 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 CARD19Q96LW7 228 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 TMEM126AQ9H061 195 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 ABRACLQ9P1F3 81 aa2.36□□□□□ -2.03
MTHFD1-216ENST00000557539 A0A087WXM4 84 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 H3BRN7 92 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 H3BUA1 57 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 CTSDP07339 412 aaPredicted RBP2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 CXCL1P09341 107 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 SDC2P34741 201 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 TMBIM6P55061 237 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 ARPC4P59998 168 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 TPRXLQ17RH7 258 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 Q6ZSA8 131 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 HSPB9Q9BQS6 159 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 NPCDR1Q9BY65 106 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 NUBP2Q9Y5Y2 271 aa2.35□□□□□ -2.03
MTHFD1-216ENST00000557539 IBA57-AS1B1ANH7 110 aa2.34□□□□□ -2.03
MTHFD1-216ENST00000557539 RAB4BP61018 213 aa2.34□□□□□ -2.03
MTHFD1-216ENST00000557539 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
MTHFD1-216ENST00000557539 RPL39P5Q59GN2 51 aa2.34□□□□□ -2.03
MTHFD1-216ENST00000557539 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.03
MTHFD1-216ENST00000557539 OR5H6Q8NGV6 325 aa2.34□□□□□ -2.03
MTHFD1-216ENST00000557539 NHP2Q9NX24 153 aaKnown RBP2.34□□□□□ -2.03
MTHFD1-216ENST00000557539 TRAV3A0A0B4J244 114 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 G3V318 75 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 PPYP01298 95 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 RPL7P18124 248 aaKnown RBP2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 S100A11P31949 105 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 NEDD8Q15843 81 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 EIF5AL1Q6IS14 154 aaKnown RBP2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 C7orf65Q6ZTY9 151 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 TXNDC17Q9BRA2 123 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 ATG5Q9H1Y0 275 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 LAMTOR2Q9Y2Q5 125 aa2.33□□□□□ -2.04
MTHFD1-216ENST00000557539 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 A0A1B0GW64 132 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 H7BYZ3 331 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 TIMM17BO60830 172 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 BCL2P10415 239 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 MGST1P10620 155 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 SCGB1A1P11684 91 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 GNG2P59768 71 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 NCS1P62166 190 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 SSBP1Q04837 148 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 HRCT1Q6UXD1 115 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 TTC9CQ8N5M4 171 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 C9orf163Q8N9P6 203 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 VSTM2AQ8TAG5 236 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 TMEM167AQ8TBQ9 72 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 BORCS5Q969J3 196 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 S100A16Q96FQ6 103 aaKnown RBP2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 ZC2HC1AQ96GY0 325 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 USMG5Q96IX5 58 aa2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 SLC25A21Q9BQT8 299 aaPredicted RBP2.32□□□□□ -2.04
MTHFD1-216ENST00000557539 C6orf62Q9GZU0 229 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms