RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 C20orf78Q9BR46 151 aa10.34□□□□□ -0.75
NEDD1-210ENST00000557400 IGLV1-50A0A075B6I6 118 aa10.33□□□□□ -0.76
NEDD1-210ENST00000557400 TCAPO15273 167 aa10.33□□□□□ -0.76
NEDD1-210ENST00000557400 TLX1NBP0CAT3 122 aa10.33□□□□□ -0.76
NEDD1-210ENST00000557400 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
NEDD1-210ENST00000557400 RPL32P62910 135 aaKnown RBP10.33□□□□□ -0.76
NEDD1-210ENST00000557400 TMEM241Q24JQ0 296 aa10.33□□□□□ -0.76
NEDD1-210ENST00000557400 C10orf25Q5T742 122 aa10.33□□□□□ -0.76
NEDD1-210ENST00000557400 FAM19A5Q7Z5A7 132 aaPredicted RBP10.33□□□□□ -0.76
NEDD1-210ENST00000557400 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
NEDD1-210ENST00000557400 LINC00862A6NCI5 91 aa10.32□□□□□ -0.76
NEDD1-210ENST00000557400 UNQ6190/PRO20217Q6UXQ8 127 aa10.32□□□□□ -0.76
NEDD1-210ENST00000557400 FAM104AQ969W3 186 aa10.32□□□□□ -0.76
NEDD1-210ENST00000557400 NAT8BQ9UHF3 227 aa10.32□□□□□ -0.76
NEDD1-210ENST00000557400 TRBV24-1A0A075B6N3 115 aa10.31□□□□□ -0.76
NEDD1-210ENST00000557400 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
NEDD1-210ENST00000557400 SMDT1Q9H4I9 107 aa10.31□□□□□ -0.76
NEDD1-210ENST00000557400 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
NEDD1-210ENST00000557400 SRP19P09132 144 aaKnown RBP10.3□□□□□ -0.76
NEDD1-210ENST00000557400 KRTAP1-4P0C5Y4 121 aa10.3□□□□□ -0.76
NEDD1-210ENST00000557400 CKS2P33552 79 aa10.3□□□□□ -0.76
NEDD1-210ENST00000557400 HBBP68871 147 aa10.3□□□□□ -0.76
NEDD1-210ENST00000557400 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
NEDD1-210ENST00000557400 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
NEDD1-210ENST00000557400 IFITM10A6NMD0 228 aa10.29□□□□□ -0.76
NEDD1-210ENST00000557400 SMIM2Q9BVW6 85 aa10.29□□□□□ -0.76
NEDD1-210ENST00000557400 M0QXV9 152 aa10.28□□□□□ -0.76
NEDD1-210ENST00000557400 TNFRSF6BO95407 300 aa10.28□□□□□ -0.76
NEDD1-210ENST00000557400 UBE2BP63146 152 aa10.28□□□□□ -0.76
NEDD1-210ENST00000557400 FAM74A3Q4VXF1 159 aa10.28□□□□□ -0.76
NEDD1-210ENST00000557400 KRTAP7-1Q8IUC3 87 aa10.28□□□□□ -0.76
NEDD1-210ENST00000557400 TGIF2-C20orf24A0A0A6YYL0 155 aa10.27□□□□□ -0.77
NEDD1-210ENST00000557400 A0A1B0GW15 77 aa10.27□□□□□ -0.77
NEDD1-210ENST00000557400 UBE2D1P51668 147 aa10.27□□□□□ -0.77
NEDD1-210ENST00000557400 SMIM27A0A1W2PRY6 76 aa10.26□□□□□ -0.77
NEDD1-210ENST00000557400 RPL13AP40429 203 aaKnown RBP10.26□□□□□ -0.77
NEDD1-210ENST00000557400 RPL23P62829 140 aaKnown RBP10.26□□□□□ -0.77
NEDD1-210ENST00000557400 KIAA0087Q14695 138 aa10.26□□□□□ -0.77
NEDD1-210ENST00000557400 PRR4Q16378 134 aa10.26□□□□□ -0.77
NEDD1-210ENST00000557400 D6R8Y8 96 aa10.25□□□□□ -0.77
NEDD1-210ENST00000557400 AKAP14Q86UN6 197 aa10.25□□□□□ -0.77
NEDD1-210ENST00000557400 TRBV30A0A0K0K1B3 111 aa10.24□□□□□ -0.77
NEDD1-210ENST00000557400 NDUFC2-KCTD14E9PQ53 114 aa10.24□□□□□ -0.77
NEDD1-210ENST00000557400 ADIRFQ15847 76 aa10.24□□□□□ -0.77
NEDD1-210ENST00000557400 F8W036 122 aa10.23□□□□□ -0.77
NEDD1-210ENST00000557400 NPYP01303 97 aa10.23□□□□□ -0.77
NEDD1-210ENST00000557400 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
NEDD1-210ENST00000557400 S100A8P05109 93 aa10.22□□□□□ -0.77
NEDD1-210ENST00000557400 LINC00242Q5T6M2 205 aa10.22□□□□□ -0.77
NEDD1-210ENST00000557400 C2orf82Q6UX34 121 aa10.22□□□□□ -0.77
NEDD1-210ENST00000557400 PACRGQ96M98 296 aaPredicted RBP10.22□□□□□ -0.77
NEDD1-210ENST00000557400 PPBPP02775 128 aa10.21□□□□□ -0.77
NEDD1-210ENST00000557400 C9orf129Q5T035 196 aaKnown RBP10.21□□□□□ -0.77
NEDD1-210ENST00000557400 MRPL54Q6P161 138 aaKnown RBP10.21□□□□□ -0.77
NEDD1-210ENST00000557400 NAT8Q9UHE5 227 aa10.21□□□□□ -0.77
NEDD1-210ENST00000557400 CARHSP1Q9Y2V2 147 aaKnown RBP10.21□□□□□ -0.77
NEDD1-210ENST00000557400 PYGO1Q9Y3Y4 419 aa10.21□□□□□ -0.77
NEDD1-210ENST00000557400 MUC2Q02817 5179 aa10.2□□□□□ -0.78
NEDD1-210ENST00000557400 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
NEDD1-210ENST00000557400 RAB5AP20339 215 aa10.2□□□□□ -0.78
NEDD1-210ENST00000557400 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
NEDD1-210ENST00000557400 ZNF861PO60384 105 aa10.18□□□□□ -0.78
NEDD1-210ENST00000557400 LINC01561Q8N1V8 128 aa10.18□□□□□ -0.78
NEDD1-210ENST00000557400 TMEM141Q96I45 108 aa10.18□□□□□ -0.78
NEDD1-210ENST00000557400 A0A0U1RQV1 116 aa10.17□□□□□ -0.78
NEDD1-210ENST00000557400 C9JQL5 133 aa10.17□□□□□ -0.78
NEDD1-210ENST00000557400 ORMDL3Q8N138 153 aa10.17□□□□□ -0.78
NEDD1-210ENST00000557400 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
NEDD1-210ENST00000557400 NUPR1O60356 82 aa10.15□□□□□ -0.78
NEDD1-210ENST00000557400 TMEM136Q6ZRR5 245 aa10.15□□□□□ -0.78
NEDD1-210ENST00000557400 PRELID3AQ96N28 172 aa10.15□□□□□ -0.78
NEDD1-210ENST00000557400 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
NEDD1-210ENST00000557400 hCG_2014768A0A024R1R8 64 aa10.14□□□□□ -0.79
NEDD1-210ENST00000557400 PRSS2P07478 247 aa10.14□□□□□ -0.79
NEDD1-210ENST00000557400 C22orf24Q9Y442 160 aa10.14□□□□□ -0.79
NEDD1-210ENST00000557400 CKS1BP61024 79 aa10.13□□□□□ -0.79
NEDD1-210ENST00000557400 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
NEDD1-210ENST00000557400 Q6ZN92 141 aa10.13□□□□□ -0.79
NEDD1-210ENST00000557400 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
NEDD1-210ENST00000557400 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
NEDD1-210ENST00000557400 TSPAN13O95857 204 aa10.12□□□□□ -0.79
NEDD1-210ENST00000557400 SRSF3P84103 164 aaKnown RBP10.12□□□□□ -0.79
NEDD1-210ENST00000557400 PEA15Q15121 130 aa10.12□□□□□ -0.79
NEDD1-210ENST00000557400 ATP5L2Q7Z4Y8 100 aa10.12□□□□□ -0.79
NEDD1-210ENST00000557400 XAGE1AQ9HD64 81 aa10.12□□□□□ -0.79
NEDD1-210ENST00000557400 CYSLTR1Q9Y271 337 aa10.12□□□□□ -0.79
NEDD1-210ENST00000557400 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
NEDD1-210ENST00000557400 C6orf226Q5I0X4 101 aa10.11□□□□□ -0.79
NEDD1-210ENST00000557400 ZC2HC1BQ5TFG8 222 aa10.11□□□□□ -0.79
NEDD1-210ENST00000557400 LINC00173Q6ZV60 143 aa10.11□□□□□ -0.79
NEDD1-210ENST00000557400 Q8IZM0 81 aa10.11□□□□□ -0.79
NEDD1-210ENST00000557400 CTDSP1Q9GZU7 261 aa10.11□□□□□ -0.79
NEDD1-210ENST00000557400 LAMTOR2Q9Y2Q5 125 aa10.11□□□□□ -0.79
NEDD1-210ENST00000557400 LOC389332A0A1B0GUA5 103 aa10.1□□□□□ -0.79
NEDD1-210ENST00000557400 C2orf66Q6UXQ4 117 aa10.1□□□□□ -0.79
NEDD1-210ENST00000557400 AMELXQ99217 191 aa10.1□□□□□ -0.79
NEDD1-210ENST00000557400 VCX2Q9H322 139 aa10.1□□□□□ -0.79
NEDD1-210ENST00000557400 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
NEDD1-210ENST00000557400 RPL28P46779 137 aaKnown RBP10.09□□□□□ -0.79
NEDD1-210ENST00000557400 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms