RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 VCYO14598 125 aa5.29□□□□□ -1.56
VRK1-206ENST00000557222 MT-ND6P03923 174 aa5.29□□□□□ -1.56
VRK1-206ENST00000557222 CAMK2N2Q96S95 79 aa5.29□□□□□ -1.56
VRK1-206ENST00000557222 TMEM242Q9NWH2 141 aa5.29□□□□□ -1.56
VRK1-206ENST00000557222 A0A1B0GUT8 65 aa5.28□□□□□ -1.56
VRK1-206ENST00000557222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.28□□□□□ -1.56
VRK1-206ENST00000557222 RAB4AP20338 218 aa5.28□□□□□ -1.56
VRK1-206ENST00000557222 C9orf116Q5BN46 136 aaPredicted RBP5.28□□□□□ -1.56
VRK1-206ENST00000557222 DIRC1Q969H9 104 aa5.28□□□□□ -1.56
VRK1-206ENST00000557222 TIMM21Q9BVV7 248 aa5.28□□□□□ -1.56
VRK1-206ENST00000557222 PPP1R2P9O14990 202 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 TCAPO15273 167 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 FCER1GP30273 86 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 C1orf137Q5JT78 98 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 OR10D4PQ8NGN7 298 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 TMEM18Q96B42 140 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 IMMP2LQ96T52 175 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 KIR2DL4Q99706 377 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 MRPL35Q9NZE8 188 aaKnown RBP5.27□□□□□ -1.57
VRK1-206ENST00000557222 UBE2D4Q9Y2X8 147 aa5.27□□□□□ -1.57
VRK1-206ENST00000557222 IGLV1-50A0A075B6I6 118 aa5.26□□□□□ -1.57
VRK1-206ENST00000557222 HIGD1CA8MV81 97 aa5.26□□□□□ -1.57
VRK1-206ENST00000557222 IGLV7-43P04211 117 aa5.26□□□□□ -1.57
VRK1-206ENST00000557222 TMEM241Q24JQ0 296 aa5.26□□□□□ -1.57
VRK1-206ENST00000557222 TCTE3Q8IZS6 198 aa5.26□□□□□ -1.57
VRK1-206ENST00000557222 MUC2Q02817 5179 aa5.26□□□□□ -1.57
VRK1-206ENST00000557222 TRAV13-1A0A0B4J241 112 aa5.25□□□□□ -1.57
VRK1-206ENST00000557222 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
VRK1-206ENST00000557222 TLX1NBP0CAT3 122 aa5.25□□□□□ -1.57
VRK1-206ENST00000557222 SUMO2P61956 95 aaKnown RBP5.25□□□□□ -1.57
VRK1-206ENST00000557222 RPL32P62910 135 aaKnown RBP5.25□□□□□ -1.57
VRK1-206ENST00000557222 RPL18AQ02543 176 aaKnown RBP5.25□□□□□ -1.57
VRK1-206ENST00000557222 RIGQ13278 110 aa5.25□□□□□ -1.57
VRK1-206ENST00000557222 PHF5AQ7RTV0 110 aaKnown RBP5.25□□□□□ -1.57
VRK1-206ENST00000557222 OSTCQ9NRP0 149 aa5.25□□□□□ -1.57
VRK1-206ENST00000557222 LINC00862A6NCI5 91 aa5.24□□□□□ -1.57
VRK1-206ENST00000557222 H0Y9J4 135 aa5.24□□□□□ -1.57
VRK1-206ENST00000557222 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
VRK1-206ENST00000557222 C5orf38Q86SI9 138 aa5.24□□□□□ -1.57
VRK1-206ENST00000557222 AMN1Q8IY45 258 aa5.24□□□□□ -1.57
VRK1-206ENST00000557222 NRACQ8N912 160 aa5.24□□□□□ -1.57
VRK1-206ENST00000557222 C20orf78Q9BR46 151 aa5.24□□□□□ -1.57
VRK1-206ENST00000557222 TRBV24-1A0A075B6N3 115 aa5.23□□□□□ -1.57
VRK1-206ENST00000557222 A0A087WZ39 114 aa5.23□□□□□ -1.57
VRK1-206ENST00000557222 IGHV3OR16-9A0A0B4J2B5 98 aa5.23□□□□□ -1.57
VRK1-206ENST00000557222 NDUFA1O15239 70 aa5.23□□□□□ -1.57
VRK1-206ENST00000557222 MRPS36P82909 103 aaKnown RBP5.23□□□□□ -1.57
VRK1-206ENST00000557222 LINC01551Q86U37 167 aa5.23□□□□□ -1.57
VRK1-206ENST00000557222 PRR26Q8N8Z3 221 aa5.23□□□□□ -1.57
VRK1-206ENST00000557222 OPRPNQ99935 248 aaPredicted RBP5.23□□□□□ -1.57
VRK1-206ENST00000557222 SMIM7Q9BQ49 75 aa5.23□□□□□ -1.57
VRK1-206ENST00000557222 hCG_2014768A0A024R1R8 64 aa5.22□□□□□ -1.57
VRK1-206ENST00000557222 A0A1B0GW15 77 aa5.22□□□□□ -1.57
VRK1-206ENST00000557222 RPL13AP40429 203 aaKnown RBP5.22□□□□□ -1.57
VRK1-206ENST00000557222 FAM104BQ5XKR9 115 aa5.22□□□□□ -1.57
VRK1-206ENST00000557222 Q6ZUT4 128 aa5.22□□□□□ -1.57
VRK1-206ENST00000557222 ORAOV1Q8WV07 137 aa5.22□□□□□ -1.57
VRK1-206ENST00000557222 SPANXA1Q9NS26 97 aa5.22□□□□□ -1.57
VRK1-206ENST00000557222 CARHSP1Q9Y2V2 147 aaKnown RBP5.22□□□□□ -1.57
VRK1-206ENST00000557222 A0A0U1RQV1 116 aa5.21□□□□□ -1.58
VRK1-206ENST00000557222 SMKR1H3BMG3 65 aa5.21□□□□□ -1.58
VRK1-206ENST00000557222 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.58
VRK1-206ENST00000557222 RNASE13Q5GAN3 156 aaKnown RBP5.21□□□□□ -1.58
VRK1-206ENST00000557222 NAT8BQ9UHF3 227 aa5.21□□□□□ -1.58
VRK1-206ENST00000557222 V9GYV3 84 aa5.21□□□□□ -1.58
VRK1-206ENST00000557222 TRBV30A0A0K0K1B3 111 aa5.2□□□□□ -1.58
VRK1-206ENST00000557222 ZNF727A8MUV8 499 aa5.2□□□□□ -1.58
VRK1-206ENST00000557222 CEBPGP53567 150 aa5.2□□□□□ -1.58
VRK1-206ENST00000557222 MRPL51Q4U2R6 128 aaKnown RBP5.2□□□□□ -1.58
VRK1-206ENST00000557222 FAM74A3Q4VXF1 159 aa5.2□□□□□ -1.58
VRK1-206ENST00000557222 LINC01561Q8N1V8 128 aa5.2□□□□□ -1.58
VRK1-206ENST00000557222 FAM104AQ969W3 186 aa5.2□□□□□ -1.58
VRK1-206ENST00000557222 EIF5A2Q9GZV4 153 aaKnown RBP5.2□□□□□ -1.58
VRK1-206ENST00000557222 SMDT1Q9H4I9 107 aa5.2□□□□□ -1.58
VRK1-206ENST00000557222 TGIF2-C20orf24A0A0A6YYL0 155 aa5.19□□□□□ -1.58
VRK1-206ENST00000557222 CKS2P33552 79 aa5.19□□□□□ -1.58
VRK1-206ENST00000557222 UBE2D1P51668 147 aa5.19□□□□□ -1.58
VRK1-206ENST00000557222 HBBP68871 147 aa5.19□□□□□ -1.58
VRK1-206ENST00000557222 C10orf25Q5T742 122 aa5.19□□□□□ -1.58
VRK1-206ENST00000557222 UNQ6190/PRO20217Q6UXQ8 127 aa5.19□□□□□ -1.58
VRK1-206ENST00000557222 KRTAP11-1Q8IUC1 163 aa5.19□□□□□ -1.58
VRK1-206ENST00000557222 C6orf48Q9UBA6 75 aa5.19□□□□□ -1.58
VRK1-206ENST00000557222 SMIM27A0A1W2PRY6 76 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 FAM168BA1KXE4 195 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 IFITM10A6NMD0 228 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 NDUFC2-KCTD14E9PQ53 114 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 PPBPP02775 128 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 S100A8P05109 93 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 SRP19P09132 144 aaKnown RBP5.18□□□□□ -1.58
VRK1-206ENST00000557222 RPL39P62891 51 aaKnown RBP5.18□□□□□ -1.58
VRK1-206ENST00000557222 KIAA0087Q14695 138 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 ALKAL2Q6UX46 152 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 FAM19A5Q7Z5A7 132 aaPredicted RBP5.18□□□□□ -1.58
VRK1-206ENST00000557222 KRTAP7-1Q8IUC3 87 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 SMIM2Q9BVW6 85 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 PYGO1Q9Y3Y4 419 aa5.18□□□□□ -1.58
VRK1-206ENST00000557222 F8W036 122 aa5.17□□□□□ -1.58
VRK1-206ENST00000557222 M0QXV9 152 aa5.17□□□□□ -1.58
VRK1-206ENST00000557222 UBE2BP63146 152 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms