RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 NOP10Q9NPE3 64 aaKnown RBP8.1□□□□□ -1.11
SRP54-213ENST00000556994 CR1P17927 2039 aa8.1□□□□□ -1.11
SRP54-213ENST00000556994 ZFYVE26Q68DK2 2539 aa8.1□□□□□ -1.11
SRP54-213ENST00000556994 LOC100131303A0A0U1RQF7 123 aa8.09□□□□□ -1.11
SRP54-213ENST00000556994 TOMM7Q9P0U1 55 aa8.09□□□□□ -1.11
SRP54-213ENST00000556994 SETXQ7Z333 2677 aaKnown RBP8.09□□□□□ -1.11
SRP54-213ENST00000556994 TRBV7-7A0A0K0K1E9 115 aa8.09□□□□□ -1.11
SRP54-213ENST00000556994 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
SRP54-213ENST00000556994 FAM236AA0A1B0GUQ0 79 aa8.08□□□□□ -1.12
SRP54-213ENST00000556994 FAM236BA0A1B0GV22 79 aa8.08□□□□□ -1.12
SRP54-213ENST00000556994 UBE2L6O14933 153 aa8.08□□□□□ -1.12
SRP54-213ENST00000556994 PLA2G2AP14555 144 aa8.08□□□□□ -1.12
SRP54-213ENST00000556994 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
SRP54-213ENST00000556994 IL17DQ8TAD2 202 aa8.08□□□□□ -1.12
SRP54-213ENST00000556994 CSDC2Q9Y534 153 aaKnown RBP8.08□□□□□ -1.12
SRP54-213ENST00000556994 KRTAP10-9P60411 292 aa8.08□□□□□ -1.12
SRP54-213ENST00000556994 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
SRP54-213ENST00000556994 COPS9Q8WXC6 57 aa8.07□□□□□ -1.12
SRP54-213ENST00000556994 TRACP01848 142 aa8.07□□□□□ -1.12
SRP54-213ENST00000556994 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
SRP54-213ENST00000556994 TRBV10-1A0A0K0K1A3 114 aa8.06□□□□□ -1.12
SRP54-213ENST00000556994 HERV-K104P63124 156 aa8.06□□□□□ -1.12
SRP54-213ENST00000556994 SMIM20Q8N5G0 67 aa8.06□□□□□ -1.12
SRP54-213ENST00000556994 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
SRP54-213ENST00000556994 ZNF462Q96JM2 2506 aa8.06□□□□□ -1.12
SRP54-213ENST00000556994 ACYP1P07311 99 aa8.06□□□□□ -1.12
SRP54-213ENST00000556994 HIST2H2BCQ6DN03 193 aa8.06□□□□□ -1.12
SRP54-213ENST00000556994 WFDC10AQ9H1F0 79 aa8.06□□□□□ -1.12
SRP54-213ENST00000556994 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
SRP54-213ENST00000556994 TRGV2A0A075B6R0 118 aa8.05□□□□□ -1.12
SRP54-213ENST00000556994 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
SRP54-213ENST00000556994 GAGE2AQ6NT46 116 aa8.05□□□□□ -1.12
SRP54-213ENST00000556994 PRB1P04280 392 aa8.04□□□□□ -1.12
SRP54-213ENST00000556994 COX7B2Q8TF08 81 aa8.04□□□□□ -1.12
SRP54-213ENST00000556994 IGLV4-60A0A075B6I1 120 aa8.04□□□□□ -1.12
SRP54-213ENST00000556994 CRPP02741 224 aa8.04□□□□□ -1.12
SRP54-213ENST00000556994 LINC00158P58513 81 aa8.04□□□□□ -1.12
SRP54-213ENST00000556994 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
SRP54-213ENST00000556994 A0A087WYN8 130 aa8.03□□□□□ -1.12
SRP54-213ENST00000556994 RPL35AP18077 110 aaKnown RBP8.03□□□□□ -1.12
SRP54-213ENST00000556994 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
SRP54-213ENST00000556994 TRAV13-2A0A0B4J235 113 aa8.03□□□□□ -1.12
SRP54-213ENST00000556994 ATP5G1P05496 136 aa8.03□□□□□ -1.12
SRP54-213ENST00000556994 GIG44P09565 113 aaPredicted RBP8.03□□□□□ -1.12
SRP54-213ENST00000556994 MALP21145 153 aa8.03□□□□□ -1.12
SRP54-213ENST00000556994 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
SRP54-213ENST00000556994 CCDC168Q8NDH2 2452 aa8.03□□□□□ -1.12
SRP54-213ENST00000556994 CCL24O00175 119 aa8.02□□□□□ -1.13
SRP54-213ENST00000556994 PFN2P35080 140 aa8.02□□□□□ -1.13
SRP54-213ENST00000556994 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
SRP54-213ENST00000556994 SMIM11BQ8TCY0 68 aa8.02□□□□□ -1.13
SRP54-213ENST00000556994 C11orf68Q9H3H3 251 aaKnown RBP8.02□□□□□ -1.13
SRP54-213ENST00000556994 PLAC8L1A1L4L8 177 aa8.02□□□□□ -1.13
SRP54-213ENST00000556994 C5orf38Q86SI9 138 aa8.02□□□□□ -1.13
SRP54-213ENST00000556994 IMUPQ9GZP8 106 aa8.01□□□□□ -1.13
SRP54-213ENST00000556994 TRGV4A0A0C4DH28 118 aa8.01□□□□□ -1.13
SRP54-213ENST00000556994 CCL18P55774 89 aa8.01□□□□□ -1.13
SRP54-213ENST00000556994 KMT2BQ9UMN6 2715 aaPredicted RBP8□□□□□ -1.13
SRP54-213ENST00000556994 TRAV25A0A0B4J276 109 aa8□□□□□ -1.13
SRP54-213ENST00000556994 DNAL4O96015 105 aa8□□□□□ -1.13
SRP54-213ENST00000556994 PF4P02776 101 aa8□□□□□ -1.13
SRP54-213ENST00000556994 C14orf132Q9NPU4 83 aa8□□□□□ -1.13
SRP54-213ENST00000556994 ITPR3Q14573 2671 aa7.99□□□□□ -1.13
SRP54-213ENST00000556994 FN1P02751 2386 aaKnown RBP7.99□□□□□ -1.13
SRP54-213ENST00000556994 APCP25054 2843 aa7.99□□□□□ -1.13
SRP54-213ENST00000556994 FAM222AQ5U5X8 452 aa7.99□□□□□ -1.13
SRP54-213ENST00000556994 SDIM1Q6ZPB5 146 aa7.99□□□□□ -1.13
SRP54-213ENST00000556994 IGHV3OR16-9A0A0B4J2B5 98 aa7.98□□□□□ -1.13
SRP54-213ENST00000556994 SLPIP03973 132 aa7.98□□□□□ -1.13
SRP54-213ENST00000556994 INAFM2P0DMQ5 153 aa7.98□□□□□ -1.13
SRP54-213ENST00000556994 OR13C6PQ8NH95 151 aa7.98□□□□□ -1.13
SRP54-213ENST00000556994 PAX4O43316 350 aa7.98□□□□□ -1.13
SRP54-213ENST00000556994 DEFB113Q30KQ7 82 aa7.98□□□□□ -1.13
SRP54-213ENST00000556994 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
SRP54-213ENST00000556994 TRBV6-4A0A1B0GX49 114 aa7.97□□□□□ -1.13
SRP54-213ENST00000556994 DNAJC9-AS1A6NH13 148 aa7.97□□□□□ -1.13
SRP54-213ENST00000556994 LECT2O14960 151 aa7.97□□□□□ -1.13
SRP54-213ENST00000556994 C16orf74Q96GX8 76 aa7.97□□□□□ -1.13
SRP54-213ENST00000556994 NBEAL2Q6ZNJ1 2754 aa7.97□□□□□ -1.13
SRP54-213ENST00000556994 NCR3O14931 201 aa7.96□□□□□ -1.13
SRP54-213ENST00000556994 FHL2Q14192 279 aa7.96□□□□□ -1.13
SRP54-213ENST00000556994 C9orf153Q5TBE3 101 aa7.96□□□□□ -1.13
SRP54-213ENST00000556994 ESM1Q9NQ30 184 aa7.96□□□□□ -1.13
SRP54-213ENST00000556994 C3orf22Q8N5N4 141 aa7.96□□□□□ -1.14
SRP54-213ENST00000556994 FAM110AQ9BQ89 295 aa7.96□□□□□ -1.14
SRP54-213ENST00000556994 FLNAP21333 2647 aaKnown RBP7.95□□□□□ -1.14
SRP54-213ENST00000556994 A0A087WZ39 114 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 IGKV3D-7A0A0C4DH55 119 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 DEFB130BP0DP73 79 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 DEFB130AP0DP74 79 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 CLPSL2Q6UWE3 100 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 LRRC75A-AS1Q8N1F1 130 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 PPDPFQ9H3Y8 114 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 UBR5O95071 2799 aaPredicted RBP7.95□□□□□ -1.14
SRP54-213ENST00000556994 XCL1P47992 114 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 C6orf226Q5I0X4 101 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
SRP54-213ENST00000556994 IBA57-AS1B1ANH7 110 aa7.94□□□□□ -1.14
SRP54-213ENST00000556994 KLK5Q9Y337 293 aaPredicted RBP7.94□□□□□ -1.14
SRP54-213ENST00000556994 MTORP42345 2549 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms