RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 APOMO95445 188 aa6.88□□□□□ -1.31
LINC00239-201ENST00000556973 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
LINC00239-201ENST00000556973 C5orf38Q86SI9 138 aa6.88□□□□□ -1.31
LINC00239-201ENST00000556973 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
LINC00239-201ENST00000556973 AMELXQ99217 191 aa6.88□□□□□ -1.31
LINC00239-201ENST00000556973 C2orf88Q9BSF0 95 aa6.88□□□□□ -1.31
LINC00239-201ENST00000556973 SMCO4Q9NRQ5 59 aa6.88□□□□□ -1.31
LINC00239-201ENST00000556973 FA2HQ7L5A8 372 aa6.87□□□□□ -1.31
LINC00239-201ENST00000556973 ERASQ7Z444 233 aa6.87□□□□□ -1.31
LINC00239-201ENST00000556973 CIRBP-AS1Q8TBR5 109 aa6.87□□□□□ -1.31
LINC00239-201ENST00000556973 TIMM17AQ99595 171 aa6.87□□□□□ -1.31
LINC00239-201ENST00000556973 IGLV4-69A0A075B6H9 119 aa6.86□□□□□ -1.31
LINC00239-201ENST00000556973 LINC00614P0C842 121 aa6.86□□□□□ -1.31
LINC00239-201ENST00000556973 UBE2D1P51668 147 aa6.86□□□□□ -1.31
LINC00239-201ENST00000556973 LINC00242Q5T6M2 205 aa6.86□□□□□ -1.31
LINC00239-201ENST00000556973 SCXQ7RTU7 201 aa6.86□□□□□ -1.31
LINC00239-201ENST00000556973 OR10D4PQ8NGN7 298 aa6.86□□□□□ -1.31
LINC00239-201ENST00000556973 LINC00526Q96FQ7 95 aa6.86□□□□□ -1.31
LINC00239-201ENST00000556973 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
LINC00239-201ENST00000556973 COX6A2Q02221 97 aa6.85□□□□□ -1.31
LINC00239-201ENST00000556973 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
LINC00239-201ENST00000556973 FAM19A3Q7Z5A8 133 aa6.85□□□□□ -1.31
LINC00239-201ENST00000556973 C18orf32Q8TCD1 76 aa6.85□□□□□ -1.31
LINC00239-201ENST00000556973 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
LINC00239-201ENST00000556973 A0A087WZ39 114 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 RAB5BP61020 215 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 SEC11AP67812 179 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 CIRBPQ14011 172 aaKnown RBP6.84□□□□□ -1.31
LINC00239-201ENST00000556973 ZC2HC1BQ5TFG8 222 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 Q5VSD8 79 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 LINC00173Q6ZV60 143 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 CBLN2Q8IUK8 224 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 C2orf48Q96LS8 159 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.31
LINC00239-201ENST00000556973 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
LINC00239-201ENST00000556973 F8WDY8 70 aa6.83□□□□□ -1.32
LINC00239-201ENST00000556973 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
LINC00239-201ENST00000556973 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
LINC00239-201ENST00000556973 CARD19Q96LW7 228 aa6.83□□□□□ -1.32
LINC00239-201ENST00000556973 CAMK2N2Q96S95 79 aa6.83□□□□□ -1.32
LINC00239-201ENST00000556973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.82□□□□□ -1.32
LINC00239-201ENST00000556973 PANO1I0J062 215 aa6.82□□□□□ -1.32
LINC00239-201ENST00000556973 SPAG11BQ08648 103 aa6.82□□□□□ -1.32
LINC00239-201ENST00000556973 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
LINC00239-201ENST00000556973 ORAOV1Q8WV07 137 aa6.82□□□□□ -1.32
LINC00239-201ENST00000556973 PLA2G1BP04054 148 aaKnown RBP6.81□□□□□ -1.32
LINC00239-201ENST00000556973 HERVK_113P63121 156 aa6.81□□□□□ -1.32
LINC00239-201ENST00000556973 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
LINC00239-201ENST00000556973 Q6ZRU5 148 aa6.81□□□□□ -1.32
LINC00239-201ENST00000556973 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
LINC00239-201ENST00000556973 GEMIN7Q9H840 131 aaKnown RBP6.81□□□□□ -1.32
LINC00239-201ENST00000556973 LINC00474Q9P2X8 69 aa6.81□□□□□ -1.32
LINC00239-201ENST00000556973 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
LINC00239-201ENST00000556973 HBDP02042 147 aa6.8□□□□□ -1.32
LINC00239-201ENST00000556973 CHTF8P0CG12 524 aa6.8□□□□□ -1.32
LINC00239-201ENST00000556973 PMVKQ15126 192 aa6.8□□□□□ -1.32
LINC00239-201ENST00000556973 CST9LQ9H4G1 147 aa6.8□□□□□ -1.32
LINC00239-201ENST00000556973 MRPL35Q9NZE8 188 aaKnown RBP6.8□□□□□ -1.32
LINC00239-201ENST00000556973 PCLOQ9Y6V0 5065 aa6.8□□□□□ -1.32
LINC00239-201ENST00000556973 A0A087WYN8 130 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 A0A096LNJ9 63 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 TINCRA0A1B0GVN0 87 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 NDUFA1O15239 70 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 CHCHD1Q96BP2 118 aaKnown RBP6.79□□□□□ -1.32
LINC00239-201ENST00000556973 PLAC8Q9NZF1 115 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 CDKN2A-AS1Q9UH64 79 aa6.79□□□□□ -1.32
LINC00239-201ENST00000556973 A0A096LNI7 61 aa6.78□□□□□ -1.32
LINC00239-201ENST00000556973 COLCA2A8K830 154 aa6.78□□□□□ -1.32
LINC00239-201ENST00000556973 ATP5LO75964 103 aa6.78□□□□□ -1.32
LINC00239-201ENST00000556973 TRGC2P03986 189 aa6.78□□□□□ -1.32
LINC00239-201ENST00000556973 PDZD11Q5EBL8 140 aa6.78□□□□□ -1.32
LINC00239-201ENST00000556973 STPG4Q8N801 248 aa6.78□□□□□ -1.32
LINC00239-201ENST00000556973 PRSS2P07478 247 aa6.77□□□□□ -1.33
LINC00239-201ENST00000556973 PMCHL1Q16048 86 aa6.77□□□□□ -1.33
LINC00239-201ENST00000556973 UNQ6190/PRO20217Q6UXQ8 127 aa6.77□□□□□ -1.33
LINC00239-201ENST00000556973 BAGE3Q86Y29 109 aa6.77□□□□□ -1.33
LINC00239-201ENST00000556973 PACRGQ96M98 296 aaPredicted RBP6.77□□□□□ -1.33
LINC00239-201ENST00000556973 IGLV5-45A0A087WSX0 123 aa6.76□□□□□ -1.33
LINC00239-201ENST00000556973 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
LINC00239-201ENST00000556973 NDUFA6P56556 154 aa6.76□□□□□ -1.33
LINC00239-201ENST00000556973 GAGE2BQ13066 116 aa6.76□□□□□ -1.33
LINC00239-201ENST00000556973 C6orf226Q5I0X4 101 aa6.76□□□□□ -1.33
LINC00239-201ENST00000556973 Q8IZM0 81 aa6.76□□□□□ -1.33
LINC00239-201ENST00000556973 TRBV30A0A0K0K1B3 111 aa6.75□□□□□ -1.33
LINC00239-201ENST00000556973 TLX1NBP0CAT3 122 aa6.75□□□□□ -1.33
LINC00239-201ENST00000556973 CKS1BP61024 79 aa6.75□□□□□ -1.33
LINC00239-201ENST00000556973 C10orf25Q5T742 122 aa6.75□□□□□ -1.33
LINC00239-201ENST00000556973 LINC00469Q8N7U9 141 aa6.75□□□□□ -1.33
LINC00239-201ENST00000556973 TOMM7Q9P0U1 55 aa6.75□□□□□ -1.33
LINC00239-201ENST00000556973 C6orf48Q9UBA6 75 aa6.75□□□□□ -1.33
LINC00239-201ENST00000556973 HSBP1O75506 76 aa6.74□□□□□ -1.33
LINC00239-201ENST00000556973 IGLC3P0DOY3 106 aa6.74□□□□□ -1.33
LINC00239-201ENST00000556973 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
LINC00239-201ENST00000556973 RPL37AP61513 92 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms