RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RPL27AP46776 148 aaKnown RBP2.25□□□□□ -2.05
PRPF39-210ENST00000556718 CRIP1P50238 77 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 ZNF80P51504 273 aaPredicted RBP2.25□□□□□ -2.05
PRPF39-210ENST00000556718 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 MED12LQ86YW9 2145 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 C20orf197Q8N268 126 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 COL4A6Q14031 1691 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 SPTBP11277 2137 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 COL5A1P20908 1838 aaPredicted RBP2.24□□□□□ -2.05
PRPF39-210ENST00000556718 KIAA1549Q9HCM3 1950 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 IGKV3D-7A0A0C4DH55 119 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 SPTY2D1-AS1A0A0U1RR47 76 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 H3BRN7 92 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 ERC2-IT1O76042 136 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 CCKP06307 115 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 TSPEAR-AS2P59090 65 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 BLCAPP62952 87 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 MUC7Q8TAX7 377 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 UBE2D4Q9Y2X8 147 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 LENEPQ9Y5L5 61 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 PRR14LQ5THK1 2151 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 PTPRSQ13332 1948 aa2.24□□□□□ -2.05
PRPF39-210ENST00000556718 EXPH5Q8NEV8 1989 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 SEC16AO15027 2179 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 IGIPA6NJ69 53 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 M0R1W7 72 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 MGPP08493 103 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 SNRPD3P62318 126 aaKnown RBP2.23□□□□□ -2.05
PRPF39-210ENST00000556718 WT1-ASQ06250 92 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 KLKP1Q107X0 134 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 ZNF833PQ6ZTB9 187 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 SMCR5Q8TEV8 140 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 PATE1Q8WXA2 126 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 CLEC2BQ92478 149 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 NDUFA12Q9UI09 145 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 MYO9BQ13459 2157 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 SHANK1Q9Y566 2161 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 PCDH15Q96QU1 1955 aa2.23□□□□□ -2.05
PRPF39-210ENST00000556718 TANC2Q9HCD6 1990 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 TRAV23DV6A0A075B6W5 121 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 IGHV3-73A0A0B4J1V6 119 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 TRAV12-3A0A0B4J271 114 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 TRAV21A0A0B4J279 112 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 TRBV27A0A0K0K1C4 114 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 FAM223BA6NKX1 122 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 LY6HO94772 140 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 CTSGP08311 255 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 MIFP14174 115 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 PDE6GP18545 87 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 UBE2BP63146 152 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 HCP5Q6MZN7 132 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 CCL13Q99616 98 aa2.22□□□□□ -2.05
PRPF39-210ENST00000556718 MRPL36Q9P0J6 103 aaKnown RBP2.22□□□□□ -2.05
PRPF39-210ENST00000556718 GOLGA4Q13439 2230 aaKnown RBP2.21□□□□□ -2.06
PRPF39-210ENST00000556718 IGKV2-40A0A087WW87 121 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-210ENST00000556718 TRBV6-5A0A0K0K1A5 114 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 IBA57-AS1B1ANH7 110 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 E7EQL1 145 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 F8WEM9 126 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 H7BZZ5 65 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 TMEM256-PLSCR3K7ERE1 68 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 IGKV2D-40P01614 121 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-210ENST00000556718 IGKV1-16P04430 117 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 P0C880 135 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 FUSP35637 526 aaKnown RBP eCLIP2.21□□□□□ -2.06
PRPF39-210ENST00000556718 ESRGQ1W209 222 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 FAM223AQ8IWN6 122 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 AMELXQ99217 191 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 C16orf95Q9H693 158 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 PROK2Q9HC23 129 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 ORMDL1Q9P0S3 153 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 SCN10AQ9Y5Y9 1956 aa2.21□□□□□ -2.06
PRPF39-210ENST00000556718 IGLV10-54A0A075B6I4 117 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 IGHV1-18A0A0C4DH31 117 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 A0A1B0GW54 56 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 A0A1W2PNM2 257 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 I3L2K1 104 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 NDUFA1O15239 70 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 CRPP02741 224 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 CCL3P10147 92 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 RPL28P46779 137 aaKnown RBP2.2□□□□□ -2.06
PRPF39-210ENST00000556718 Q1T7F1 81 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 LYPD5Q6UWN5 251 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 FP248Q71RG6 208 aaPredicted RBP2.2□□□□□ -2.06
PRPF39-210ENST00000556718 LINC00308Q8TCZ7 52 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 LEAP2Q969E1 77 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 OBSCN-AS1Q96MR7 158 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 LINC00846Q9NV44 126 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 COL4A5P29400 1685 aa2.2□□□□□ -2.06
PRPF39-210ENST00000556718 RNASE4P34096 147 aaKnown RBP2.19□□□□□ -2.06
PRPF39-210ENST00000556718 POLR2KP53803 58 aaKnown RBP2.19□□□□□ -2.06
PRPF39-210ENST00000556718 ENHOQ6UWT2 76 aa2.19□□□□□ -2.06
PRPF39-210ENST00000556718 VMO1Q7Z5L0 202 aa2.19□□□□□ -2.06
PRPF39-210ENST00000556718 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
PRPF39-210ENST00000556718 Q8TAT8 98 aa2.19□□□□□ -2.06
PRPF39-210ENST00000556718 PTPRBP23467 1997 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 MYOFQ9NZM1 2061 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 IGHV3-64A0A075B6Q5 118 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 A0A087WVE0 104 aa2.18□□□□□ -2.06
PRPF39-210ENST00000556718 H3BPC8 53 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms