RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 SMKR1H3BMG3 65 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 M0QXV9 152 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 SOCS3O14543 225 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 VCYO14598 125 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 PSCAO43653 123 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 S100A4P26447 101 aaKnown RBP2.8□□□□□ -1.96
ATXN3-242ENST00000556644 CRYBA4P53673 196 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 DEFB1P60022 68 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 ERCC8Q13216 396 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 WFDC2Q14508 124 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 RNF151Q2KHN1 245 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 PIK3CD-AS1Q5SR53 167 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 Q6ZVH6 145 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 MTURNQ8N3F0 131 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 ZFAND2AQ8N6M9 145 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 NEXN-AS1Q8NBZ9 246 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 TIMM17AQ99595 171 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-242ENST00000556644 MRPL35Q9NZE8 188 aaKnown RBP2.8□□□□□ -1.96
ATXN3-242ENST00000556644 CHTOPQ9Y3Y2 248 aaKnown RBP2.8□□□□□ -1.96
ATXN3-242ENST00000556644 PHLDA3Q9Y5J5 127 aa2.8□□□□□ -1.96
ATXN3-242ENST00000556644 TRBV7-3A0A075B6L6 115 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 KLLNB2CW77 178 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 PANO1I0J062 215 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 K7EQG2 157 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 FXYD2P54710 66 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 RHOHQ15669 191 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 RRN3P1Q2M238 152 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 ZNF479Q96JC4 524 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 KIR2DL4Q99706 377 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 C11orf21Q9P2W6 132 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 CYSLTR1Q9Y271 337 aa2.79□□□□□ -1.96
ATXN3-242ENST00000556644 IGKV2D-26A0A0A0MRZ7 120 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 TRAV2A0A0B4J234 112 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 A0A0J9YX75 114 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 TRBV27A0A0K0K1C4 114 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 H3BMG7 143 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 H3BMM0 161 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 LECT2O14960 151 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 CIDEAO60543 219 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 DUSP14O95147 198 aaKnown RBP2.78□□□□□ -1.96
ATXN3-242ENST00000556644 UBE2D1P51668 147 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 POLR2KP53803 58 aaKnown RBP2.78□□□□□ -1.96
ATXN3-242ENST00000556644 PMVKQ15126 192 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 GAGE13Q4V321 117 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 FAM159AQ6UWV7 190 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 C2orf66Q6UXQ4 117 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 C1orf158Q8N1D5 194 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 BAALCQ8WXS3 180 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 RASL10AQ92737 203 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 PTH2Q96A98 100 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 LINC01600Q96MT4 127 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 CLUHP3Q96NS8 147 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 KRTAP9-3Q9BYQ3 159 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 SPANXA1Q9NS26 97 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
ATXN3-242ENST00000556644 KIF25-AS1Q9Y6Z4 181 aa2.78□□□□□ -1.96
ATXN3-242ENST00000556644 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-242ENST00000556644 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 LYRM9A8MSI8 78 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 TMEM262E9PQX1 116 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 H3BVH4 76 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 RNASE3P12724 160 aaKnown RBP2.77□□□□□ -1.97
ATXN3-242ENST00000556644 GATA1P15976 413 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-242ENST00000556644 SNRPD3P62318 126 aaKnown RBP2.77□□□□□ -1.97
ATXN3-242ENST00000556644 ANXA2RQ3ZCQ2 193 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 C4orf48Q5BLP8 95 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 IGFL4Q6B9Z1 124 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 RNF182Q8N6D2 247 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 SLC25A29Q8N8R3 303 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 PLEKHB2Q96CS7 222 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 PRADC1Q9BSG0 188 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 Q9HAA7 133 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 PYGO1Q9Y3Y4 419 aa2.77□□□□□ -1.97
ATXN3-242ENST00000556644 TRGV11A0A075B6L2 103 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 A0A096LPF7 62 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 A0A1B0GV72 72 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 GAGE12HA6NDE8 117 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 SDHAF1A6NFY7 115 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 ZNF815PA8K554 130 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 TMEM238C9JI98 176 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 LEPROTO15243 131 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 RNASE4P34096 147 aaKnown RBP2.76□□□□□ -1.97
ATXN3-242ENST00000556644 UBE2D3P61077 147 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 UBE2D2P62837 147 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 RPL24P83731 157 aaKnown RBP2.76□□□□□ -1.97
ATXN3-242ENST00000556644 SRSF9Q13242 221 aaKnown RBP eCLIP2.76□□□□□ -1.97
ATXN3-242ENST00000556644 ZNF876PQ49A33 203 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 SCGB1D4Q6XE38 83 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 ZFP2Q6ZN57 461 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 WFDC10BQ8IUB3 73 aa2.76□□□□□ -1.97
ATXN3-242ENST00000556644 C14orf178Q8N769 122 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-242ENST00000556644 DCANP1Q8TF63 244 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms