RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 DEFB130BP0DP73 79 aa2.88□□□□□ -1.95
PCNX1-212ENST00000556516 DEFB130AP0DP74 79 aa2.88□□□□□ -1.95
PCNX1-212ENST00000556516 EMP1P54849 157 aa2.88□□□□□ -1.95
PCNX1-212ENST00000556516 COTL1Q14019 142 aa2.88□□□□□ -1.95
PCNX1-212ENST00000556516 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
PCNX1-212ENST00000556516 RPL39LQ96EH5 51 aaKnown RBP2.88□□□□□ -1.95
PCNX1-212ENST00000556516 SCGB3A1Q96QR1 104 aa2.88□□□□□ -1.95
PCNX1-212ENST00000556516 WFDC10AQ9H1F0 79 aa2.88□□□□□ -1.95
PCNX1-212ENST00000556516 HHLA3Q9XRX5 114 aa2.88□□□□□ -1.95
PCNX1-212ENST00000556516 IGHV3-73A0A0B4J1V6 119 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 PRB2P02812 416 aaPredicted RBP2.87□□□□□ -1.95
PCNX1-212ENST00000556516 PRM2P04554 102 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 ATP5G1P05496 136 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 C3orf79P0CE67 100 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 CRYBA4P53673 196 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 DAD1P61803 113 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 PKIAP61925 76 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 DEFB135Q30KP9 77 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 PYY3Q5JQD4 70 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 Q6ZTI0 123 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 ZNRF2Q8NHG8 242 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 TOMM6Q96B49 74 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 VAMP8Q9BV40 100 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 PRO0255Q9UI72 69 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 ZNF469Q96JG9 3925 aaPredicted RBP2.87□□□□□ -1.95
PCNX1-212ENST00000556516 JMJD1CQ15652 2540 aa2.87□□□□□ -1.95
PCNX1-212ENST00000556516 NSD1Q96L73 2696 aaPredicted RBP2.86□□□□□ -1.95
PCNX1-212ENST00000556516 WNK1Q9H4A3 2382 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 IGLV2-18A0A075B6J9 118 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 UBE2L6O14933 153 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 PLNP26678 52 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 SEC11AP67812 179 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 FAM222AQ5U5X8 452 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 LGALS9CQ6DKI2 356 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 TIMM17AQ99595 171 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 GTSF1LQ9H1H1 148 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 SPANXA1Q9NS26 97 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 AKAP9Q99996 3911 aa2.86□□□□□ -1.95
PCNX1-212ENST00000556516 SORL1Q92673 2214 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 NF1P21359 2839 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 SETD2Q9BYW2 2564 aaPredicted RBP2.85□□□□□ -1.95
PCNX1-212ENST00000556516 TRBV25-1A0A075B6N4 114 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 A0A087WX48 190 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 PLAC8L1A1L4L8 177 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 F5H768 121 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 DPM2O94777 84 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 TSPAN13O95857 204 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 NMUP48645 174 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 PMVKQ15126 192 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 KPRPQ5T749 579 aaPredicted RBP2.85□□□□□ -1.95
PCNX1-212ENST00000556516 LINC01545Q5VT33 79 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 AMMECR1LQ6DCA0 310 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 SLC25A29Q8N8R3 303 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 ATP6V0E2Q8NHE4 81 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 PMCHL2Q9BQD1 86 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 C2orf88Q9BSF0 95 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 TIMM21Q9BVV7 248 aa2.85□□□□□ -1.95
PCNX1-212ENST00000556516 CHTOPQ9Y3Y2 248 aaKnown RBP2.85□□□□□ -1.95
PCNX1-212ENST00000556516 SETXQ7Z333 2677 aaKnown RBP2.85□□□□□ -1.95
PCNX1-212ENST00000556516 A0A096LNJ9 63 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 IGIPA6NJ69 53 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 F8VRH5 84 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 H3BNG1 76 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 IGKCP01834 107 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 ZNF25P17030 456 aaPredicted RBP2.84□□□□□ -1.95
PCNX1-212ENST00000556516 CXCL5P42830 114 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 UBE2D3P61077 147 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 HERVK_113P61574 105 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 UBE2D2P62837 147 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 KRTAP21-3Q3LHN1 58 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 TEX43Q6ZNM6 134 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 LINC00173Q6ZV60 143 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 Q8NAQ8 132 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 OR5A1Q8NGJ0 315 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 TMEM243Q9BU79 118 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 C11orf68Q9H3H3 251 aaKnown RBP2.84□□□□□ -1.95
PCNX1-212ENST00000556516 UQCR10Q9UDW1 63 aa2.84□□□□□ -1.95
PCNX1-212ENST00000556516 NIPBLQ6KC79 2804 aaeCLIP2.83□□□□□ -1.96
PCNX1-212ENST00000556516 ZFHX3Q15911 3703 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 TRBV6-8A0A0A6YYG3 113 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 TRAV8-6A0A0B4J262 113 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 TMEM262E9PQX1 116 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 DEFB4AO15263 64 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 CCL25O15444 150 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 P0DMU3 169 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 FAM231AP0DMU4 169 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 FAM231CP0DMU5 169 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 MRPS36P82909 103 aaKnown RBP2.83□□□□□ -1.96
PCNX1-212ENST00000556516 SPATA45Q537H7 98 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 NEGR1Q7Z3B1 354 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 ZNF664Q8N3J9 261 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 BAALCQ8WXS3 180 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 MIEN1Q9BRT3 115 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 CST9LQ9H4G1 147 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 ICOSQ9Y6W8 199 aa2.83□□□□□ -1.96
PCNX1-212ENST00000556516 ANK3Q12955 4377 aaKnown RBP2.83□□□□□ -1.96
PCNX1-212ENST00000556516 TEP1Q99973 2627 aaKnown RBP2.83□□□□□ -1.96
PCNX1-212ENST00000556516 ATRQ13535 2644 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms