RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 LINC01549A6NIU2 74 aa6.27□□□□□ -1.41
SRP54-210ENST00000556380 SLPIP03973 132 aa6.27□□□□□ -1.41
SRP54-210ENST00000556380 NPSP0C0P6 89 aa6.27□□□□□ -1.41
SRP54-210ENST00000556380 XGP55808 180 aa6.27□□□□□ -1.41
SRP54-210ENST00000556380 Q6ZUT4 128 aa6.27□□□□□ -1.41
SRP54-210ENST00000556380 OPRPNQ99935 248 aaPredicted RBP6.27□□□□□ -1.41
SRP54-210ENST00000556380 SPANXA1Q9NS26 97 aa6.27□□□□□ -1.41
SRP54-210ENST00000556380 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
SRP54-210ENST00000556380 FABP9Q0Z7S8 132 aa6.26□□□□□ -1.41
SRP54-210ENST00000556380 RNASE13Q5GAN3 156 aaKnown RBP6.26□□□□□ -1.41
SRP54-210ENST00000556380 C15orf56Q8N910 161 aa6.26□□□□□ -1.41
SRP54-210ENST00000556380 FAM30AQ9NZY2 134 aa6.26□□□□□ -1.41
SRP54-210ENST00000556380 ABCA13Q86UQ4 5058 aa6.26□□□□□ -1.41
SRP54-210ENST00000556380 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 IGIPA6NJ69 53 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 C1orf196B1AJZ1 125 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 XCL1P47992 114 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 SS18Q15532 418 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 LINC01620Q4KN68 170 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 CD164L2Q6UWJ8 174 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 Q6ZSA8 131 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 TRAPPC1Q9Y5R8 145 aa6.25□□□□□ -1.41
SRP54-210ENST00000556380 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
SRP54-210ENST00000556380 TRAV13-1A0A0B4J241 112 aa6.24□□□□□ -1.41
SRP54-210ENST00000556380 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
SRP54-210ENST00000556380 C2orf66Q6UXQ4 117 aa6.24□□□□□ -1.41
SRP54-210ENST00000556380 CBLN2Q8IUK8 224 aa6.24□□□□□ -1.41
SRP54-210ENST00000556380 CYSLTR1Q9Y271 337 aa6.24□□□□□ -1.41
SRP54-210ENST00000556380 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
SRP54-210ENST00000556380 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
SRP54-210ENST00000556380 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
SRP54-210ENST00000556380 CFAP161Q6P656 301 aa6.23□□□□□ -1.41
SRP54-210ENST00000556380 C9orf163Q8N9P6 203 aa6.23□□□□□ -1.41
SRP54-210ENST00000556380 PRSS3P2Q8NHM4 247 aa6.23□□□□□ -1.41
SRP54-210ENST00000556380 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 IGHV3OR16-9A0A0B4J2B5 98 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 RAB5BP61020 215 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 SDIM1Q6ZPB5 146 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 LINC00173Q6ZV60 143 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 C18orf32Q8TCD1 76 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 TOMM6Q96B49 74 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 URB1-AS1Q96HZ7 61 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 TMEM141Q96I45 108 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 AMELXQ99217 191 aa6.22□□□□□ -1.41
SRP54-210ENST00000556380 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
SRP54-210ENST00000556380 HIGD2BQ4VC39 106 aa6.21□□□□□ -1.42
SRP54-210ENST00000556380 ZC2HC1BQ5TFG8 222 aa6.21□□□□□ -1.42
SRP54-210ENST00000556380 TIMM17AQ99595 171 aa6.21□□□□□ -1.42
SRP54-210ENST00000556380 IFITM10A6NMD0 228 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 COX7A2LO14548 114 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 UBE2D1P51668 147 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 COX6A2Q02221 97 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 LINC00242Q5T6M2 205 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 Q6ZN92 141 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 FA2HQ7L5A8 372 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 C5orf38Q86SI9 138 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 Q8N1X5 172 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 C2orf88Q9BSF0 95 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 KRTAP3-1Q9BYR8 98 aa6.2□□□□□ -1.42
SRP54-210ENST00000556380 A0A096LNJ9 63 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 COLCA2A8K830 154 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 LINC00614P0C842 121 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 HAMPP81172 84 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 TEX43Q6ZNM6 134 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 ERASQ7Z444 233 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 FAM19A3Q7Z5A8 133 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 LINC00526Q96FQ7 95 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 CHAC1Q9BUX1 264 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 VCX2Q9H322 139 aa6.19□□□□□ -1.42
SRP54-210ENST00000556380 PANO1I0J062 215 aa6.18□□□□□ -1.42
SRP54-210ENST00000556380 SEC11AP67812 179 aa6.18□□□□□ -1.42
SRP54-210ENST00000556380 CHCHD1Q96BP2 118 aaKnown RBP6.18□□□□□ -1.42
SRP54-210ENST00000556380 SCGB3A1Q96QR1 104 aa6.18□□□□□ -1.42
SRP54-210ENST00000556380 IGHV3-64A0A075B6Q5 118 aa6.17□□□□□ -1.42
SRP54-210ENST00000556380 A0A087WZ39 114 aa6.17□□□□□ -1.42
SRP54-210ENST00000556380 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.17□□□□□ -1.42
SRP54-210ENST00000556380 APOMO95445 188 aa6.17□□□□□ -1.42
SRP54-210ENST00000556380 MALP21145 153 aa6.17□□□□□ -1.42
SRP54-210ENST00000556380 CIRBPQ14011 172 aaKnown RBP6.17□□□□□ -1.42
SRP54-210ENST00000556380 SCXQ7RTU7 201 aa6.17□□□□□ -1.42
SRP54-210ENST00000556380 IGLV4-69A0A075B6H9 119 aa6.16□□□□□ -1.42
SRP54-210ENST00000556380 F8WDY8 70 aa6.16□□□□□ -1.42
SRP54-210ENST00000556380 SMR3BP02814 79 aaPredicted RBP6.16□□□□□ -1.42
SRP54-210ENST00000556380 TRGC2P03986 189 aa6.16□□□□□ -1.42
SRP54-210ENST00000556380 PDZD11Q5EBL8 140 aa6.16□□□□□ -1.42
SRP54-210ENST00000556380 LINC01561Q8N1V8 128 aa6.16□□□□□ -1.42
SRP54-210ENST00000556380 CIRBP-AS1Q8TBR5 109 aa6.16□□□□□ -1.42
SRP54-210ENST00000556380 CST9LQ9H4G1 147 aa6.16□□□□□ -1.42
SRP54-210ENST00000556380 PKIGQ9Y2B9 76 aa6.16□□□□□ -1.42
SRP54-210ENST00000556380 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.15□□□□□ -1.42
SRP54-210ENST00000556380 ZNF561-AS1K7EIQ3 104 aa6.15□□□□□ -1.42
SRP54-210ENST00000556380 HBDP02042 147 aa6.15□□□□□ -1.42
SRP54-210ENST00000556380 S100A1P23297 94 aa6.15□□□□□ -1.42
SRP54-210ENST00000556380 SYCNQ0VAF6 134 aa6.15□□□□□ -1.42
SRP54-210ENST00000556380 KIAA0087Q14695 138 aa6.15□□□□□ -1.42
SRP54-210ENST00000556380 OR10D4PQ8NGN7 298 aa6.15□□□□□ -1.42
SRP54-210ENST00000556380 C2orf48Q96LS8 159 aa6.15□□□□□ -1.42
SRP54-210ENST00000556380 A0A0J9YXV3 536 aa6.14□□□□□ -1.43
SRP54-210ENST00000556380 C9orf118A6NHY6 69 aa6.14□□□□□ -1.43
SRP54-210ENST00000556380 SCO1O75880 301 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms