RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 LAIR2Q6ISS4 152 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 TMEM91Q6ZNR0 172 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 LCA10Q71F78 164 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF555Q8NEP9 628 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 CHCHD10Q8WYQ3 142 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-209ENST00000556353 FAM3DQ96BQ1 224 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 FXYD5Q96DB9 178 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 PGLYRP4Q96LB8 373 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 PRELID3AQ96N28 172 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 C18orf15Q96N68 181 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 C20orf78Q9BR46 151 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 PARP12Q9H0J9 701 aaKnown RBP2.62□□□□□ -1.99
PRPF39-209ENST00000556353 SLC35B3Q9H1N7 401 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 VPS13BQ7Z7G8 4022 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 TRAV41A0A0B4J266 112 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 A0A0J9YXV3 536 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 A8MUN3 132 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 G3V318 75 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF688P0C7X2 276 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 TPT1P13693 172 aaKnown RBP2.61□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF137PP52743 207 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 NPC2P61916 151 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF816Q0VGE8 651 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-209ENST00000556353 INSL4Q14641 139 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 C6orf99Q4VX62 202 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 DEFB121Q5J5C9 76 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 FAM19A3Q7Z5A8 133 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 SBSPONQ8IVN8 264 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 ZC2HC1AQ96GY0 325 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 U3KQK5 164 aa2.61□□□□□ -1.99
PRPF39-209ENST00000556353 IGHV3OR16-13A0A075B7E8 117 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 A0A0G2JRQ6 117 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 MUC21A0A140T8X8 626 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 TMEM30CPA0ZSE6 113 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 SYS1-DBNDD2H3BUS1 97 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 SDCBPO00560 298 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF73O43830 326 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-209ENST00000556353 CD3DP04234 171 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 CXCL1P09341 107 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 SAA2P0DJI9 122 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-209ENST00000556353 CBLN1P23435 193 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 HBBP68871 147 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 MPV17L2Q567V2 206 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 LGALS9CQ6DKI2 356 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 PCP2Q8IVA1 136 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 C6orf223Q8N319 242 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 OR5H2Q8NGV7 314 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 DCANP1Q8TF63 244 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 C4orf3Q8WVX3 66 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 ABHD14BQ96IU4 210 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 CHAC1Q9BUX1 264 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 HERC1Q15751 4861 aa2.6□□□□□ -1.99
PRPF39-209ENST00000556353 A0A1B0GW54 56 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 RBAKDNA6NC62 111 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 NAP1L6A6NFF2 107 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 A8MWL6 223 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 UMAD1C9J7I0 102 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 C9JQL5 133 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 COX7A2LO14548 114 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF80P51504 273 aaPredicted RBP2.59□□□□□ -1.99
PRPF39-209ENST00000556353 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -1.99
PRPF39-209ENST00000556353 SYNJ2BPP57105 145 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 LINC00313P59037 77 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 ETDBQ3ZM63 59 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 LINC00483Q53H64 154 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 PYDC2Q56P42 97 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 RPL39P5Q59GN2 51 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF833PQ6ZTB9 187 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 Q8N976 141 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 OR8A1Q8NGG7 326 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 OR5C1Q8NGR4 320 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 LSM10Q969L4 123 aaKnown RBP2.59□□□□□ -1.99
PRPF39-209ENST00000556353 LINC01600Q96MT4 127 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 HDHD3Q9BSH5 251 aaPredicted RBP2.59□□□□□ -1.99
PRPF39-209ENST00000556353 DPH3P1Q9H4G8 78 aa2.59□□□□□ -1.99
PRPF39-209ENST00000556353 IGKV1-6A0A0C4DH72 117 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 LCE6AA0A183 80 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 GRIFINA4D1Z8 144 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 H3BUT2 72 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 ATOX1O00244 68 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 COX7A2P2O60397 106 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 NDUFA3O95167 84 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 IGHV3-11P01762 117 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 IGKV1-16P04430 117 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 SRP19P09132 144 aaKnown RBP2.58□□□□□ -2
PRPF39-209ENST00000556353 SCGB1C2P0DMR2 95 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 CSN1S1P47710 185 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 LSM3P62310 102 aaKnown RBP2.58□□□□□ -2
PRPF39-209ENST00000556353 UBE2BP63146 152 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 WFDC2Q14508 124 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 MPV17LQ2QL34 196 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 NMSQ5H8A3 153 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 PSMG4Q5JS54 123 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 LINC00596Q86U02 117 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 AMN1Q8IY45 258 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 NPBQ8NG41 125 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 MUC7Q8TAX7 377 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 CMTM2Q8TAZ6 248 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 TVP23CQ96ET8 276 aa2.58□□□□□ -2
PRPF39-209ENST00000556353 MGST2Q99735 147 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms