RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 A0A1B0GW15 77 aa10.29□□□□□ -0.76
XRCC3-215ENST00000555964 HBBP68871 147 aa10.29□□□□□ -0.76
XRCC3-215ENST00000555964 MRPL51Q4U2R6 128 aaKnown RBP10.29□□□□□ -0.76
XRCC3-215ENST00000555964 FAM104BQ5XKR9 115 aa10.29□□□□□ -0.76
XRCC3-215ENST00000555964 V9GYV3 84 aa10.29□□□□□ -0.76
XRCC3-215ENST00000555964 IGHV3OR16-9A0A0B4J2B5 98 aa10.28□□□□□ -0.76
XRCC3-215ENST00000555964 RPL13AP40429 203 aaKnown RBP10.28□□□□□ -0.76
XRCC3-215ENST00000555964 UBE2D1P51668 147 aa10.28□□□□□ -0.76
XRCC3-215ENST00000555964 MRPS36P82909 103 aaKnown RBP10.28□□□□□ -0.76
XRCC3-215ENST00000555964 TRBV24-1A0A075B6N3 115 aa10.27□□□□□ -0.77
XRCC3-215ENST00000555964 TGIF2-C20orf24A0A0A6YYL0 155 aa10.27□□□□□ -0.77
XRCC3-215ENST00000555964 IFITM10A6NMD0 228 aa10.27□□□□□ -0.77
XRCC3-215ENST00000555964 CKS2P33552 79 aa10.27□□□□□ -0.77
XRCC3-215ENST00000555964 FAM19A5Q7Z5A7 132 aaPredicted RBP10.27□□□□□ -0.77
XRCC3-215ENST00000555964 S100A8P05109 93 aa10.26□□□□□ -0.77
XRCC3-215ENST00000555964 UBE2BP63146 152 aa10.26□□□□□ -0.77
XRCC3-215ENST00000555964 FAM74A3Q4VXF1 159 aa10.26□□□□□ -0.77
XRCC3-215ENST00000555964 SMIM2Q9BVW6 85 aa10.26□□□□□ -0.77
XRCC3-215ENST00000555964 SMDT1Q9H4I9 107 aa10.26□□□□□ -0.77
XRCC3-215ENST00000555964 RPL39P62891 51 aaKnown RBP10.25□□□□□ -0.77
XRCC3-215ENST00000555964 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
XRCC3-215ENST00000555964 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
XRCC3-215ENST00000555964 LPAP08519 4548 aa10.25□□□□□ -0.77
XRCC3-215ENST00000555964 TRBV30A0A0K0K1B3 111 aa10.24□□□□□ -0.77
XRCC3-215ENST00000555964 FAM168BA1KXE4 195 aa10.24□□□□□ -0.77
XRCC3-215ENST00000555964 M0QXV9 152 aa10.24□□□□□ -0.77
XRCC3-215ENST00000555964 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
XRCC3-215ENST00000555964 UNQ6190/PRO20217Q6UXQ8 127 aa10.24□□□□□ -0.77
XRCC3-215ENST00000555964 C6orf48Q9UBA6 75 aa10.24□□□□□ -0.77
XRCC3-215ENST00000555964 F8W036 122 aa10.23□□□□□ -0.77
XRCC3-215ENST00000555964 TNFRSF6BO95407 300 aa10.23□□□□□ -0.77
XRCC3-215ENST00000555964 C10orf25Q5T742 122 aa10.23□□□□□ -0.77
XRCC3-215ENST00000555964 AKAP14Q86UN6 197 aa10.23□□□□□ -0.77
XRCC3-215ENST00000555964 A0A0U1RQV1 116 aa10.22□□□□□ -0.77
XRCC3-215ENST00000555964 PPBPP02775 128 aa10.22□□□□□ -0.77
XRCC3-215ENST00000555964 IFI27P40305 119 aaPredicted RBP10.22□□□□□ -0.77
XRCC3-215ENST00000555964 ADIRFQ15847 76 aa10.22□□□□□ -0.77
XRCC3-215ENST00000555964 PACRGQ96M98 296 aaPredicted RBP10.22□□□□□ -0.77
XRCC3-215ENST00000555964 SMIM27A0A1W2PRY6 76 aa10.21□□□□□ -0.77
XRCC3-215ENST00000555964 D6R8Y8 96 aa10.2□□□□□ -0.78
XRCC3-215ENST00000555964 NDUFC2-KCTD14E9PQ53 114 aa10.2□□□□□ -0.78
XRCC3-215ENST00000555964 KRTAP1-4P0C5Y4 121 aa10.2□□□□□ -0.78
XRCC3-215ENST00000555964 RAB5AP20339 215 aa10.2□□□□□ -0.78
XRCC3-215ENST00000555964 RPL23P62829 140 aaKnown RBP10.2□□□□□ -0.78
XRCC3-215ENST00000555964 PRR4Q16378 134 aa10.2□□□□□ -0.78
XRCC3-215ENST00000555964 NAT8Q9UHE5 227 aa10.2□□□□□ -0.78
XRCC3-215ENST00000555964 CARHSP1Q9Y2V2 147 aaKnown RBP10.2□□□□□ -0.78
XRCC3-215ENST00000555964 KRTAP11-1Q8IUC1 163 aa10.19□□□□□ -0.78
XRCC3-215ENST00000555964 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
XRCC3-215ENST00000555964 PYGO1Q9Y3Y4 419 aa10.19□□□□□ -0.78
XRCC3-215ENST00000555964 LINC01561Q8N1V8 128 aa10.18□□□□□ -0.78
XRCC3-215ENST00000555964 C2orf88Q9BSF0 95 aa10.18□□□□□ -0.78
XRCC3-215ENST00000555964 KIAA0087Q14695 138 aa10.17□□□□□ -0.78
XRCC3-215ENST00000555964 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
XRCC3-215ENST00000555964 NUPR1O60356 82 aa10.16□□□□□ -0.78
XRCC3-215ENST00000555964 NPYP01303 97 aa10.16□□□□□ -0.78
XRCC3-215ENST00000555964 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
XRCC3-215ENST00000555964 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
XRCC3-215ENST00000555964 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
XRCC3-215ENST00000555964 ZNF861PO60384 105 aa10.15□□□□□ -0.78
XRCC3-215ENST00000555964 PRSS2P07478 247 aa10.15□□□□□ -0.78
XRCC3-215ENST00000555964 MRPL54Q6P161 138 aaKnown RBP10.15□□□□□ -0.78
XRCC3-215ENST00000555964 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
XRCC3-215ENST00000555964 Q6ZN92 141 aa10.14□□□□□ -0.79
XRCC3-215ENST00000555964 KRTAP7-1Q8IUC3 87 aa10.14□□□□□ -0.79
XRCC3-215ENST00000555964 A0A1B0GXF2 115 aa10.13□□□□□ -0.79
XRCC3-215ENST00000555964 CKS1BP61024 79 aa10.13□□□□□ -0.79
XRCC3-215ENST00000555964 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
XRCC3-215ENST00000555964 C9orf129Q5T035 196 aaKnown RBP10.13□□□□□ -0.79
XRCC3-215ENST00000555964 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
XRCC3-215ENST00000555964 ATP5L2Q7Z4Y8 100 aa10.13□□□□□ -0.79
XRCC3-215ENST00000555964 PEA15Q15121 130 aa10.12□□□□□ -0.79
XRCC3-215ENST00000555964 TMEM136Q6ZRR5 245 aa10.12□□□□□ -0.79
XRCC3-215ENST00000555964 PRELID3AQ96N28 172 aa10.12□□□□□ -0.79
XRCC3-215ENST00000555964 LAMTOR2Q9Y2Q5 125 aa10.12□□□□□ -0.79
XRCC3-215ENST00000555964 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
XRCC3-215ENST00000555964 CYSLTR1Q9Y271 337 aa10.1□□□□□ -0.79
XRCC3-215ENST00000555964 NPSP0C0P6 89 aa10.09□□□□□ -0.79
XRCC3-215ENST00000555964 C6orf226Q5I0X4 101 aa10.09□□□□□ -0.79
XRCC3-215ENST00000555964 Q8IZM0 81 aa10.09□□□□□ -0.79
XRCC3-215ENST00000555964 VCX2Q9H322 139 aa10.09□□□□□ -0.79
XRCC3-215ENST00000555964 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
XRCC3-215ENST00000555964 RPL28P46779 137 aaKnown RBP10.08□□□□□ -0.8
XRCC3-215ENST00000555964 SEC11AP67812 179 aa10.08□□□□□ -0.8
XRCC3-215ENST00000555964 TP73-AS1Q9UF72 201 aa10.08□□□□□ -0.8
XRCC3-215ENST00000555964 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
XRCC3-215ENST00000555964 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
XRCC3-215ENST00000555964 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
XRCC3-215ENST00000555964 PAPPA-AS1Q5QFB9 102 aa10.07□□□□□ -0.8
XRCC3-215ENST00000555964 hCG_2014768A0A024R1R8 64 aa10.06□□□□□ -0.8
XRCC3-215ENST00000555964 C9JQL5 133 aa10.06□□□□□ -0.8
XRCC3-215ENST00000555964 K7EMI3 77 aa10.06□□□□□ -0.8
XRCC3-215ENST00000555964 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
XRCC3-215ENST00000555964 AMELXQ99217 191 aa10.06□□□□□ -0.8
XRCC3-215ENST00000555964 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
XRCC3-215ENST00000555964 CTDSP1Q9GZU7 261 aa10.06□□□□□ -0.8
XRCC3-215ENST00000555964 LOC389332A0A1B0GUA5 103 aa10.05□□□□□ -0.8
XRCC3-215ENST00000555964 CRYGAP11844 174 aa10.05□□□□□ -0.8
XRCC3-215ENST00000555964 CXCL5P42830 114 aa10.05□□□□□ -0.8
XRCC3-215ENST00000555964 HERVK_113P63121 156 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms