RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 DAZ4Q86SG3 579 aaKnown RBP4.81□□□□□ -1.64
SLIRP-204ENST00000555890 OR11H2Q8NH07 326 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 DEFB104AQ8WTQ1 72 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 PRADC1Q9BSG0 188 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 VCX2Q9H322 139 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 CST9LQ9H4G1 147 aa4.81□□□□□ -1.64
SLIRP-204ENST00000555890 DAZ3Q9NR90 486 aaKnown RBP4.81□□□□□ -1.64
SLIRP-204ENST00000555890 DLEU1O43261 78 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 IGHV4-30-4P0DP06 118 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 NMUP48645 174 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 UBE2D3P61077 147 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 UBE2D2P62837 147 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 GAGE1Q13065 139 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 GAGE4Q13068 117 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 GAGE5Q13069 117 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 FHL2Q14192 279 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 DEFB135Q30KP9 77 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 TMEM97Q5BJF2 176 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 ZC2HC1BQ5TFG8 222 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 LINC00612Q8N6U2 182 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 SLC25A29Q8N8R3 303 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 PHLDA1Q8WV24 401 aaPredicted RBP4.8□□□□□ -1.64
SLIRP-204ENST00000555890 SPANXA1Q9NS26 97 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 HHLA3Q9XRX5 114 aa4.8□□□□□ -1.64
SLIRP-204ENST00000555890 PKD1P98161 4303 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 IGHV3-38A0A0C4DH36 116 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 SIVA1O15304 175 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 CDK2AP2O75956 126 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 HERVK_113P61574 105 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 FAM222AQ5U5X8 452 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 Q75L30 129 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 BOD1L2Q8IYS8 172 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 C2orf88Q9BSF0 95 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 CHCHD7Q9BUK0 85 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 TIMM21Q9BVV7 248 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 Q9UF83 564 aa4.79□□□□□ -1.64
SLIRP-204ENST00000555890 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 IGHV4-28A0A0C4DH34 117 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 TEX48A0A1B0GUV7 120 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 A0A1B0GVY2 172 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 H7C423 109 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 BATFQ16520 125 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 SNHG12Q9BXW3 62 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 GTSF1LQ9H1H1 148 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
SLIRP-204ENST00000555890 IGLV4-69A0A075B6H9 119 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 TRBV25-1A0A075B6N4 114 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.77□□□□□ -1.65
SLIRP-204ENST00000555890 IGKV2-29A2NJV5 120 aaPredicted RBP4.77□□□□□ -1.65
SLIRP-204ENST00000555890 C11orf86A6NJI1 115 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 E9PLD3 99 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 UBE2L6O14933 153 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 TCTAP57738 103 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 DAD1P61803 113 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 MRPS36P82909 103 aaKnown RBP4.77□□□□□ -1.65
SLIRP-204ENST00000555890 TMEM170BQ5T4T1 132 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 AMMECR1LQ6DCA0 310 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 NFE4Q86UQ8 179 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 SBSPONQ8IVN8 264 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 TMEM101Q96IK0 257 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 AMELXQ99217 191 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 OPRPNQ99935 248 aaPredicted RBP4.77□□□□□ -1.65
SLIRP-204ENST00000555890 TMEM243Q9BU79 118 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 PRO0255Q9UI72 69 aa4.77□□□□□ -1.65
SLIRP-204ENST00000555890 IGKV2D-26A0A0A0MRZ7 120 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 TRAV8-6A0A0B4J262 113 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 ATP5G1P05496 136 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 FGF6P10767 208 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 HINT1P49773 126 aaPredicted RBP4.76□□□□□ -1.65
SLIRP-204ENST00000555890 COL5A1-AS1Q5SY13 56 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 PCP2Q8IVA1 136 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 Q8NAQ8 132 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 CHAC1Q9BUX1 264 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 HIGD1BQ9P298 99 aa4.76□□□□□ -1.65
SLIRP-204ENST00000555890 CSDC2Q9Y534 153 aaKnown RBP4.76□□□□□ -1.65
SLIRP-204ENST00000555890 A0A0J9YXV3 536 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 LOC100131303A0A0U1RQF7 123 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 TINCRA0A1B0GVN0 87 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 DEFB4AO15263 64 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 SEC11AP67812 179 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 HSD52Q0P140 79 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 MPV17L2Q567V2 206 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 CEMP1Q6PRD7 247 aaPredicted RBP4.75□□□□□ -1.65
SLIRP-204ENST00000555890 NTM-AS1Q6ZSK4 140 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 LINC00336Q6ZUF6 198 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 C2orf91Q6ZV80 131 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 OR5A1Q8NGJ0 315 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 ATP6V0E2Q8NHE4 81 aa4.75□□□□□ -1.65
SLIRP-204ENST00000555890 GEMIN7Q9H840 131 aaKnown RBP4.75□□□□□ -1.65
SLIRP-204ENST00000555890 TRBV6-8A0A0A6YYG3 113 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 MYMXA0A1B0GTQ4 84 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 TMEM223A0PJW6 202 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 F5H768 121 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 H3BRM9 83 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 LINC00694P0DN24 101 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 ZNF25P17030 456 aaPredicted RBP4.74□□□□□ -1.65
SLIRP-204ENST00000555890 TAL2Q16559 108 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 Q6ZUT4 128 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms