RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 SMIM7Q9BQ49 75 aa11.69□□□□□ -0.54
FOXN3-211ENST00000555855 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
FOXN3-211ENST00000555855 C10orf25Q5T742 122 aa11.68□□□□□ -0.54
FOXN3-211ENST00000555855 LINC01551Q86U37 167 aa11.68□□□□□ -0.54
FOXN3-211ENST00000555855 KRTAP1-4P0C5Y4 121 aa11.67□□□□□ -0.54
FOXN3-211ENST00000555855 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
FOXN3-211ENST00000555855 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
FOXN3-211ENST00000555855 EIF5A2Q9GZV4 153 aaKnown RBP11.66□□□□□ -0.54
FOXN3-211ENST00000555855 C6orf48Q9UBA6 75 aa11.66□□□□□ -0.54
FOXN3-211ENST00000555855 ZNF727A8MUV8 499 aa11.65□□□□□ -0.54
FOXN3-211ENST00000555855 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
FOXN3-211ENST00000555855 MRPL51Q4U2R6 128 aaKnown RBP11.65□□□□□ -0.54
FOXN3-211ENST00000555855 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.54
FOXN3-211ENST00000555855 TCTE3Q8IZS6 198 aa11.65□□□□□ -0.54
FOXN3-211ENST00000555855 SMDT1Q9H4I9 107 aa11.65□□□□□ -0.54
FOXN3-211ENST00000555855 M0QXV9 152 aa11.64□□□□□ -0.55
FOXN3-211ENST00000555855 CKS2P33552 79 aa11.64□□□□□ -0.55
FOXN3-211ENST00000555855 HBBP68871 147 aa11.64□□□□□ -0.55
FOXN3-211ENST00000555855 SPANXA1Q9NS26 97 aa11.64□□□□□ -0.55
FOXN3-211ENST00000555855 CARHSP1Q9Y2V2 147 aaKnown RBP11.64□□□□□ -0.55
FOXN3-211ENST00000555855 TGIF2-C20orf24A0A0A6YYL0 155 aa11.63□□□□□ -0.55
FOXN3-211ENST00000555855 IFITM10A6NMD0 228 aa11.63□□□□□ -0.55
FOXN3-211ENST00000555855 RPL32P62910 135 aaKnown RBP11.63□□□□□ -0.55
FOXN3-211ENST00000555855 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
FOXN3-211ENST00000555855 NAT8BQ9UHF3 227 aa11.63□□□□□ -0.55
FOXN3-211ENST00000555855 V9GYV3 84 aa11.63□□□□□ -0.55
FOXN3-211ENST00000555855 MUC2Q02817 5179 aa11.62□□□□□ -0.55
FOXN3-211ENST00000555855 TRBV24-1A0A075B6N3 115 aa11.62□□□□□ -0.55
FOXN3-211ENST00000555855 ALKAL2Q6UX46 152 aa11.61□□□□□ -0.55
FOXN3-211ENST00000555855 PACRGQ96M98 296 aaPredicted RBP11.61□□□□□ -0.55
FOXN3-211ENST00000555855 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
FOXN3-211ENST00000555855 TNFRSF6BO95407 300 aa11.6□□□□□ -0.55
FOXN3-211ENST00000555855 KRTAP7-1Q8IUC3 87 aa11.6□□□□□ -0.55
FOXN3-211ENST00000555855 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
FOXN3-211ENST00000555855 A0A1B0GW15 77 aa11.58□□□□□ -0.56
FOXN3-211ENST00000555855 NDUFC2-KCTD14E9PQ53 114 aa11.58□□□□□ -0.56
FOXN3-211ENST00000555855 ZNF861PO60384 105 aa11.58□□□□□ -0.56
FOXN3-211ENST00000555855 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
FOXN3-211ENST00000555855 FAM74A3Q4VXF1 159 aa11.58□□□□□ -0.56
FOXN3-211ENST00000555855 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
FOXN3-211ENST00000555855 KRTAP9-2Q9BYQ4 174 aa11.58□□□□□ -0.56
FOXN3-211ENST00000555855 TSPAN13O95857 204 aa11.57□□□□□ -0.56
FOXN3-211ENST00000555855 SRP19P09132 144 aaKnown RBP11.57□□□□□ -0.56
FOXN3-211ENST00000555855 IFI27P40305 119 aaPredicted RBP11.56□□□□□ -0.56
FOXN3-211ENST00000555855 RAB5AP20339 215 aa11.55□□□□□ -0.56
FOXN3-211ENST00000555855 C9orf129Q5T035 196 aaKnown RBP11.55□□□□□ -0.56
FOXN3-211ENST00000555855 C2orf82Q6UX34 121 aa11.55□□□□□ -0.56
FOXN3-211ENST00000555855 D6R8Y8 96 aa11.54□□□□□ -0.56
FOXN3-211ENST00000555855 F8W036 122 aa11.54□□□□□ -0.56
FOXN3-211ENST00000555855 NUPR1O60356 82 aa11.54□□□□□ -0.56
FOXN3-211ENST00000555855 S100A8P05109 93 aa11.54□□□□□ -0.56
FOXN3-211ENST00000555855 LINC00242Q5T6M2 205 aa11.54□□□□□ -0.56
FOXN3-211ENST00000555855 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
FOXN3-211ENST00000555855 LBHQ53QV2 105 aaPredicted RBP11.53□□□□□ -0.56
FOXN3-211ENST00000555855 PPBPP02775 128 aa11.52□□□□□ -0.57
FOXN3-211ENST00000555855 RPL23P62829 140 aaKnown RBP11.52□□□□□ -0.57
FOXN3-211ENST00000555855 ADIRFQ15847 76 aa11.52□□□□□ -0.57
FOXN3-211ENST00000555855 LINC01561Q8N1V8 128 aa11.52□□□□□ -0.57
FOXN3-211ENST00000555855 PYGO1Q9Y3Y4 419 aa11.52□□□□□ -0.57
FOXN3-211ENST00000555855 NPYP01303 97 aa11.51□□□□□ -0.57
FOXN3-211ENST00000555855 PRSS2P07478 247 aa11.51□□□□□ -0.57
FOXN3-211ENST00000555855 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
FOXN3-211ENST00000555855 CKS1BP61024 79 aa11.5□□□□□ -0.57
FOXN3-211ENST00000555855 TMEM141Q96I45 108 aa11.5□□□□□ -0.57
FOXN3-211ENST00000555855 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
FOXN3-211ENST00000555855 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
FOXN3-211ENST00000555855 TEX43Q6ZNM6 134 aa11.49□□□□□ -0.57
FOXN3-211ENST00000555855 CTDSP1Q9GZU7 261 aa11.49□□□□□ -0.57
FOXN3-211ENST00000555855 MRPL54Q6P161 138 aaKnown RBP11.48□□□□□ -0.57
FOXN3-211ENST00000555855 Q6ZN92 141 aa11.48□□□□□ -0.57
FOXN3-211ENST00000555855 TYMSOSQ8TAI1 123 aa11.48□□□□□ -0.57
FOXN3-211ENST00000555855 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
FOXN3-211ENST00000555855 TOMM7Q9P0U1 55 aa11.48□□□□□ -0.57
FOXN3-211ENST00000555855 NAT8Q9UHE5 227 aa11.48□□□□□ -0.57
FOXN3-211ENST00000555855 CRYGAP11844 174 aa11.47□□□□□ -0.57
FOXN3-211ENST00000555855 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
FOXN3-211ENST00000555855 TMEM136Q6ZRR5 245 aa11.47□□□□□ -0.57
FOXN3-211ENST00000555855 LINC00469Q8N7U9 141 aa11.47□□□□□ -0.57
FOXN3-211ENST00000555855 ORMDL3Q8N138 153 aa11.46□□□□□ -0.57
FOXN3-211ENST00000555855 PRELID3AQ96N28 172 aa11.45□□□□□ -0.58
FOXN3-211ENST00000555855 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
FOXN3-211ENST00000555855 AKAP14Q86UN6 197 aa11.44□□□□□ -0.58
FOXN3-211ENST00000555855 ALKBH7Q9BT30 221 aaPredicted RBP11.44□□□□□ -0.58
FOXN3-211ENST00000555855 VCX2Q9H322 139 aa11.44□□□□□ -0.58
FOXN3-211ENST00000555855 A0A087X002 238 aa11.43□□□□□ -0.58
FOXN3-211ENST00000555855 A0A1B0GXF2 115 aa11.42□□□□□ -0.58
FOXN3-211ENST00000555855 BCE1O60756 84 aa11.42□□□□□ -0.58
FOXN3-211ENST00000555855 MRPL55Q7Z7F7 128 aaKnown RBP11.42□□□□□ -0.58
FOXN3-211ENST00000555855 Q8IZM0 81 aa11.42□□□□□ -0.58
FOXN3-211ENST00000555855 TP73-AS1Q9UF72 201 aa11.42□□□□□ -0.58
FOXN3-211ENST00000555855 LOC389332A0A1B0GUA5 103 aa11.41□□□□□ -0.58
FOXN3-211ENST00000555855 LCE2AQ5TA79 106 aaPredicted RBP11.41□□□□□ -0.58
FOXN3-211ENST00000555855 CYSLTR1Q9Y271 337 aa11.41□□□□□ -0.58
FOXN3-211ENST00000555855 FAT4Q6V0I7 4981 aa11.41□□□□□ -0.58
FOXN3-211ENST00000555855 PRSS47A8MTI9 375 aa11.39□□□□□ -0.59
FOXN3-211ENST00000555855 ZC2HC1BQ5TFG8 222 aa11.39□□□□□ -0.59
FOXN3-211ENST00000555855 C2orf66Q6UXQ4 117 aa11.39□□□□□ -0.59
FOXN3-211ENST00000555855 AMELXQ99217 191 aa11.39□□□□□ -0.59
FOXN3-211ENST00000555855 MAP1LC3AQ9H492 121 aa11.39□□□□□ -0.59
FOXN3-211ENST00000555855 SEC11AP67812 179 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms