RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 NAT8BQ9UHF3 227 aa5.91□□□□□ -1.46
VIPAS39-207ENST00000555854 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
VIPAS39-207ENST00000555854 A0A1B0GUT8 65 aa5.9□□□□□ -1.46
VIPAS39-207ENST00000555854 A0A1B0GW15 77 aa5.9□□□□□ -1.46
VIPAS39-207ENST00000555854 IFITM10A6NMD0 228 aa5.9□□□□□ -1.46
VIPAS39-207ENST00000555854 POLR2KP53803 58 aaKnown RBP5.9□□□□□ -1.46
VIPAS39-207ENST00000555854 SMIM15Q7Z3B0 74 aa5.9□□□□□ -1.46
VIPAS39-207ENST00000555854 NRACQ8N912 160 aa5.9□□□□□ -1.46
VIPAS39-207ENST00000555854 NUP35Q8NFH5 326 aa5.9□□□□□ -1.46
VIPAS39-207ENST00000555854 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
VIPAS39-207ENST00000555854 IGHV3-64A0A075B6Q5 118 aa5.89□□□□□ -1.47
VIPAS39-207ENST00000555854 A0A087WYN8 130 aa5.89□□□□□ -1.47
VIPAS39-207ENST00000555854 GVQW2A0A096LPI5 108 aaPredicted RBP5.89□□□□□ -1.47
VIPAS39-207ENST00000555854 TRBV27A0A0K0K1C4 114 aa5.89□□□□□ -1.47
VIPAS39-207ENST00000555854 H7C423 109 aa5.89□□□□□ -1.47
VIPAS39-207ENST00000555854 I3L3M4 83 aa5.89□□□□□ -1.47
VIPAS39-207ENST00000555854 RNASEKQ6P5S7 137 aaKnown RBP5.89□□□□□ -1.47
VIPAS39-207ENST00000555854 ZNF25P17030 456 aaPredicted RBP5.88□□□□□ -1.47
VIPAS39-207ENST00000555854 AMMECR1LQ6DCA0 310 aa5.88□□□□□ -1.47
VIPAS39-207ENST00000555854 MRPL52Q86TS9 123 aaKnown RBP5.88□□□□□ -1.47
VIPAS39-207ENST00000555854 OR5A1Q8NGJ0 315 aa5.88□□□□□ -1.47
VIPAS39-207ENST00000555854 MRAP2Q96G30 205 aa5.88□□□□□ -1.47
VIPAS39-207ENST00000555854 ST20Q9HBF5 79 aa5.88□□□□□ -1.47
VIPAS39-207ENST00000555854 LINC00959A0A1B0GUT2 108 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 CCL25O15444 150 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 OXTP01178 125 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 PMCHP20382 165 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 XCL1P47992 114 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 COX6A2Q02221 97 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 TMEM136Q6ZRR5 245 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 BAGE3Q86Y29 109 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 PRSS3P2Q8NHM4 247 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 BORCS7Q96B45 105 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 LINC00526Q96FQ7 95 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 CDC42SE2Q9NRR3 84 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 AP5S1Q9NUS5 200 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 PLAC8Q9NZF1 115 aa5.87□□□□□ -1.47
VIPAS39-207ENST00000555854 A0A096LNI7 61 aa5.86□□□□□ -1.47
VIPAS39-207ENST00000555854 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.86□□□□□ -1.47
VIPAS39-207ENST00000555854 RIGQ13278 110 aa5.85□□□□□ -1.47
VIPAS39-207ENST00000555854 MRPL51Q4U2R6 128 aaKnown RBP5.85□□□□□ -1.47
VIPAS39-207ENST00000555854 RNASE13Q5GAN3 156 aaKnown RBP5.85□□□□□ -1.47
VIPAS39-207ENST00000555854 FAM104BQ5XKR9 115 aa5.85□□□□□ -1.47
VIPAS39-207ENST00000555854 Q6ZUT4 128 aa5.85□□□□□ -1.47
VIPAS39-207ENST00000555854 FAM104AQ969W3 186 aa5.85□□□□□ -1.47
VIPAS39-207ENST00000555854 UBE2D4Q9Y2X8 147 aa5.85□□□□□ -1.47
VIPAS39-207ENST00000555854 IGKV2-24A0A0C4DH68 120 aa5.84□□□□□ -1.47
VIPAS39-207ENST00000555854 A0A1B0GXF2 115 aa5.84□□□□□ -1.47
VIPAS39-207ENST00000555854 LINC00587B1AMM8 73 aa5.84□□□□□ -1.47
VIPAS39-207ENST00000555854 DDTP30046 118 aa5.84□□□□□ -1.47
VIPAS39-207ENST00000555854 SUMO2P61956 95 aaKnown RBP5.84□□□□□ -1.47
VIPAS39-207ENST00000555854 HBBP68871 147 aa5.84□□□□□ -1.47
VIPAS39-207ENST00000555854 PDZD11Q5EBL8 140 aa5.84□□□□□ -1.47
VIPAS39-207ENST00000555854 CFAP161Q6P656 301 aa5.84□□□□□ -1.47
VIPAS39-207ENST00000555854 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 C20orf202A1L168 122 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 SCGB1D1O95968 90 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 CAMPP49913 170 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 PMCHL1Q16048 86 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 MAJINQ3KP22 176 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 CD164L2Q6UWJ8 174 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 ZNF664Q8N3J9 261 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 CHCHD1Q96BP2 118 aaKnown RBP5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 TMEM101Q96IK0 257 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
VIPAS39-207ENST00000555854 VCYO14598 125 aa5.82□□□□□ -1.48
VIPAS39-207ENST00000555854 SERF1AO75920 110 aa5.82□□□□□ -1.48
VIPAS39-207ENST00000555854 PRR3P79522 188 aaKnown RBP5.82□□□□□ -1.48
VIPAS39-207ENST00000555854 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
VIPAS39-207ENST00000555854 MRPL54Q6P161 138 aaKnown RBP5.82□□□□□ -1.48
VIPAS39-207ENST00000555854 CARD19Q96LW7 228 aa5.82□□□□□ -1.48
VIPAS39-207ENST00000555854 CSDC2Q9Y534 153 aaKnown RBP5.82□□□□□ -1.48
VIPAS39-207ENST00000555854 D6R8Y8 96 aa5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 NPYP01303 97 aa5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 FCER1GP30273 86 aa5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 RPL39P62891 51 aaKnown RBP5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 RPL32P62910 135 aaKnown RBP5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 TEX43Q6ZNM6 134 aa5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 Q6ZRU5 148 aa5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 STPG4Q8N801 248 aa5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 ALKBH7Q9BT30 221 aaPredicted RBP5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 SMIM2Q9BVW6 85 aa5.81□□□□□ -1.48
VIPAS39-207ENST00000555854 IGLV4-69A0A075B6H9 119 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 TRAV13-1A0A0B4J241 112 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 HSBP1O75506 76 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 TNFRSF6BO95407 300 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 GHRHP01286 108 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 SS18Q15532 418 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 C18orf32Q8TCD1 76 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 KIR2DL4Q99706 377 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 C20orf78Q9BR46 151 aa5.8□□□□□ -1.48
VIPAS39-207ENST00000555854 PPP1R17O96001 155 aa5.79□□□□□ -1.48
VIPAS39-207ENST00000555854 CKS2P33552 79 aa5.79□□□□□ -1.48
VIPAS39-207ENST00000555854 SYCNQ0VAF6 134 aa5.79□□□□□ -1.48
VIPAS39-207ENST00000555854 ODF1Q14990 250 aa5.79□□□□□ -1.48
VIPAS39-207ENST00000555854 SERTAD4-AS1Q5TG53 156 aa5.79□□□□□ -1.48
VIPAS39-207ENST00000555854 OPRPNQ99935 248 aaPredicted RBP5.79□□□□□ -1.48
VIPAS39-207ENST00000555854 C2orf88Q9BSF0 95 aa5.79□□□□□ -1.48
VIPAS39-207ENST00000555854 TIMM21Q9BVV7 248 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms