RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 LOC107984156A0A0G2JMH3 177 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 H7C423 109 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 ARL17AQ8IVW1 177 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 MTURNQ8N3F0 131 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 F5H768 121 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 DEFB4AO15263 64 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 FAM222AQ5U5X8 452 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 SPANXDQ9BXN6 97 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 SPANXCQ9NY87 97 aa17.01■□□□□ 0.31
TMEM260-207ENST00000555497 IGLV4-60A0A075B6I1 120 aa17■□□□□ 0.31
TMEM260-207ENST00000555497 NDUFA1O15239 70 aa17■□□□□ 0.31
TMEM260-207ENST00000555497 PRSS2P07478 247 aa17■□□□□ 0.31
TMEM260-207ENST00000555497 F8P00451 2351 aa16.99■□□□□ 0.31
TMEM260-207ENST00000555497 GYPEP15421 78 aa16.98■□□□□ 0.31
TMEM260-207ENST00000555497 WFDC9Q8NEX5 89 aa16.98■□□□□ 0.31
TMEM260-207ENST00000555497 IGHV3-33P01772 117 aa16.98■□□□□ 0.31
TMEM260-207ENST00000555497 MIAQ16674 131 aa16.98■□□□□ 0.31
TMEM260-207ENST00000555497 A0A0B4J2C4 111 aa16.97■□□□□ 0.31
TMEM260-207ENST00000555497 NPC2P61916 151 aa16.97■□□□□ 0.31
TMEM260-207ENST00000555497 CHCHD5Q9BSY4 110 aa16.97■□□□□ 0.31
TMEM260-207ENST00000555497 Q9H8V8 135 aa16.96■□□□□ 0.31
TMEM260-207ENST00000555497 PSMB2P49721 201 aa16.96■□□□□ 0.3
TMEM260-207ENST00000555497 DAND5Q8N907 189 aa16.96■□□□□ 0.3
TMEM260-207ENST00000555497 APOC4P55056 127 aa16.95■□□□□ 0.3
TMEM260-207ENST00000555497 ATP6V0E2Q8NHE4 81 aa16.95■□□□□ 0.3
TMEM260-207ENST00000555497 TIMM17BO60830 172 aa16.94■□□□□ 0.3
TMEM260-207ENST00000555497 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.94■□□□□ 0.3
TMEM260-207ENST00000555497 IGHV4-28A0A0C4DH34 117 aa16.94■□□□□ 0.3
TMEM260-207ENST00000555497 IGKV3OR2-268A0A0C4DH90 116 aa16.94■□□□□ 0.3
TMEM260-207ENST00000555497 ZNF625Q96I27 306 aaPredicted RBP16.94■□□□□ 0.3
TMEM260-207ENST00000555497 LYRM9A8MSI8 78 aa16.93■□□□□ 0.3
TMEM260-207ENST00000555497 FOXI1Q12951 378 aa16.93■□□□□ 0.3
TMEM260-207ENST00000555497 PRO0255Q9UI72 69 aa16.93■□□□□ 0.3
TMEM260-207ENST00000555497 A0A1B0GV72 72 aa16.93■□□□□ 0.3
TMEM260-207ENST00000555497 H7C2G1 150 aa16.93■□□□□ 0.3
TMEM260-207ENST00000555497 SMCPP49901 116 aaPredicted RBP16.93■□□□□ 0.3
TMEM260-207ENST00000555497 TCL1BO95988 128 aa16.92■□□□□ 0.3
TMEM260-207ENST00000555497 ERG28Q9UKR5 140 aa16.92■□□□□ 0.3
TMEM260-207ENST00000555497 A0A096LPF7 62 aa16.91■□□□□ 0.3
TMEM260-207ENST00000555497 WIPF1O43516 503 aa16.9■□□□□ 0.3
TMEM260-207ENST00000555497 FLNBO75369 2602 aaKnown RBP16.9■□□□□ 0.3
TMEM260-207ENST00000555497 Q8NAQ8 132 aa16.89■□□□□ 0.29
TMEM260-207ENST00000555497 CELA1Q9UNI1 258 aa16.89■□□□□ 0.29
TMEM260-207ENST00000555497 A0A0U1RRA0 63 aa16.88■□□□□ 0.29
TMEM260-207ENST00000555497 PAX4O43316 350 aa16.88■□□□□ 0.29
TMEM260-207ENST00000555497 IGHV4-30-4P0DP06 118 aa16.88■□□□□ 0.29
TMEM260-207ENST00000555497 SCGB1C2P0DMR2 95 aa16.87■□□□□ 0.29
TMEM260-207ENST00000555497 LYRM7Q5U5X0 104 aa16.87■□□□□ 0.29
TMEM260-207ENST00000555497 PRIMA1Q86XR5 153 aa16.86■□□□□ 0.29
TMEM260-207ENST00000555497 IFITM1P13164 125 aa16.85■□□□□ 0.29
TMEM260-207ENST00000555497 CIRBPQ14011 172 aaKnown RBP16.85■□□□□ 0.29
TMEM260-207ENST00000555497 IGHV3OR16-9A0A0B4J2B5 98 aa16.85■□□□□ 0.29
TMEM260-207ENST00000555497 CDIP1Q9H305 208 aa16.85■□□□□ 0.29
TMEM260-207ENST00000555497 TRBV20-1A0A075B6N2 111 aa16.84■□□□□ 0.29
TMEM260-207ENST00000555497 DAD1P61803 113 aa16.84■□□□□ 0.29
TMEM260-207ENST00000555497 RNF183Q96D59 192 aa16.84■□□□□ 0.29
TMEM260-207ENST00000555497 Q1RN00 199 aa16.84■□□□□ 0.29
TMEM260-207ENST00000555497 LINC00308Q8TCZ7 52 aa16.84■□□□□ 0.29
TMEM260-207ENST00000555497 TMEM262E9PQX1 116 aa16.83■□□□□ 0.28
TMEM260-207ENST00000555497 MIFP14174 115 aa16.83■□□□□ 0.28
TMEM260-207ENST00000555497 LINC00959A0A1B0GUT2 108 aa16.82■□□□□ 0.28
TMEM260-207ENST00000555497 SOSTDC1Q6X4U4 206 aa16.82■□□□□ 0.28
TMEM260-207ENST00000555497 CKS1BP61024 79 aa16.82■□□□□ 0.28
TMEM260-207ENST00000555497 OXLD1Q5BKU9 147 aa16.82■□□□□ 0.28
TMEM260-207ENST00000555497 COX7B2Q8TF08 81 aa16.81■□□□□ 0.28
TMEM260-207ENST00000555497 TRIAP1O43715 76 aa16.8■□□□□ 0.28
TMEM260-207ENST00000555497 KRTAP24-1Q3LI83 254 aa16.8■□□□□ 0.28
TMEM260-207ENST00000555497 MEIG1Q5JSS6 88 aa16.8■□□□□ 0.28
TMEM260-207ENST00000555497 A0A1B0GUV1 79 aa16.8■□□□□ 0.28
TMEM260-207ENST00000555497 C5orf38Q86SI9 138 aa16.8■□□□□ 0.28
TMEM260-207ENST00000555497 TEN1Q86WV5 123 aa16.8■□□□□ 0.28
TMEM260-207ENST00000555497 PPDPFLQ8WWR9 84 aa16.8■□□□□ 0.28
TMEM260-207ENST00000555497 HERV-K104P63124 156 aa16.79■□□□□ 0.28
TMEM260-207ENST00000555497 TRBV30A0A0K0K1B3 111 aa16.78■□□□□ 0.28
TMEM260-207ENST00000555497 CARD19Q96LW7 228 aa16.78■□□□□ 0.28
TMEM260-207ENST00000555497 TOMM7Q9P0U1 55 aa16.78■□□□□ 0.28
TMEM260-207ENST00000555497 TRAV26-1A0A087WT03 109 aa16.78■□□□□ 0.28
TMEM260-207ENST00000555497 A0A087WZ39 114 aa16.78■□□□□ 0.28
TMEM260-207ENST00000555497 ATP5G1P05496 136 aa16.77■□□□□ 0.28
TMEM260-207ENST00000555497 KRTAP10-11P60412 298 aa16.77■□□□□ 0.28
TMEM260-207ENST00000555497 CLPSL2Q6UWE3 100 aa16.77■□□□□ 0.27
TMEM260-207ENST00000555497 ICOSQ9Y6W8 199 aa16.76■□□□□ 0.27
TMEM260-207ENST00000555497 FBN1P35555 2871 aaKnown RBP16.76■□□□□ 0.27
TMEM260-207ENST00000555497 SPART-AS1P0CW21 52 aa16.76■□□□□ 0.27
TMEM260-207ENST00000555497 Q8N3U1 123 aa16.76■□□□□ 0.27
TMEM260-207ENST00000555497 RPL13AP40429 203 aaKnown RBP16.75■□□□□ 0.27
TMEM260-207ENST00000555497 HTN3P15516 51 aa16.74■□□□□ 0.27
TMEM260-207ENST00000555497 MT-ATP8P03928 68 aa16.73■□□□□ 0.27
TMEM260-207ENST00000555497 XCL1P47992 114 aa16.73■□□□□ 0.27
TMEM260-207ENST00000555497 XGP55808 180 aa16.72■□□□□ 0.27
TMEM260-207ENST00000555497 SS18Q15532 418 aa16.7■□□□□ 0.26
TMEM260-207ENST00000555497 STAB1Q9NY15 2570 aa16.7■□□□□ 0.26
TMEM260-207ENST00000555497 C9JAW5 83 aa16.7■□□□□ 0.26
TMEM260-207ENST00000555497 LINC00269Q8N2A0 174 aa16.69■□□□□ 0.26
TMEM260-207ENST00000555497 RETNQ9HD89 108 aa16.69■□□□□ 0.26
TMEM260-207ENST00000555497 SHISA2Q6UWI4 295 aa16.69■□□□□ 0.26
TMEM260-207ENST00000555497 PKD1L1Q8TDX9 2849 aa16.68■□□□□ 0.26
TMEM260-207ENST00000555497 ATXN8Q156A1 80 aa16.68■□□□□ 0.26
TMEM260-207ENST00000555497 ANKRD29Q8N6D5 301 aa16.68■□□□□ 0.26
TMEM260-207ENST00000555497 MIR7-3HGQ8N6C7 128 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms