RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 TRAV12-1A0A0B4J245 112 aa13.62□□□□□ -0.23
FOXN3-209ENST00000555353 CCL25O15444 150 aa13.62□□□□□ -0.23
FOXN3-209ENST00000555353 SS18Q15532 418 aa13.62□□□□□ -0.23
FOXN3-209ENST00000555353 PGPEP1Q9NXJ5 209 aa13.62□□□□□ -0.23
FOXN3-209ENST00000555353 TRAV13-1A0A0B4J241 112 aa13.61□□□□□ -0.23
FOXN3-209ENST00000555353 SYS1-DBNDD2H3BUS1 97 aa13.6□□□□□ -0.23
FOXN3-209ENST00000555353 C3orf79P0CE67 100 aa13.6□□□□□ -0.23
FOXN3-209ENST00000555353 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
FOXN3-209ENST00000555353 PET117Q6UWS5 81 aa13.6□□□□□ -0.23
FOXN3-209ENST00000555353 MAPKAPK5-AS1Q8N8E1 139 aa13.6□□□□□ -0.23
FOXN3-209ENST00000555353 TRAV8-4A0A0B4J246 113 aa13.59□□□□□ -0.23
FOXN3-209ENST00000555353 LINC00959A0A1B0GUT2 108 aa13.59□□□□□ -0.23
FOXN3-209ENST00000555353 SEC11AP67812 179 aa13.59□□□□□ -0.23
FOXN3-209ENST00000555353 CDPF1Q6NVV7 123 aa13.59□□□□□ -0.23
FOXN3-209ENST00000555353 OR10D4PQ8NGN7 298 aa13.59□□□□□ -0.23
FOXN3-209ENST00000555353 C20orf202A1L168 122 aa13.58□□□□□ -0.23
FOXN3-209ENST00000555353 CHTOPQ9Y3Y2 248 aaKnown RBP13.58□□□□□ -0.23
FOXN3-209ENST00000555353 LECT2O14960 151 aa13.58□□□□□ -0.24
FOXN3-209ENST00000555353 UBE2D1P51668 147 aa13.58□□□□□ -0.24
FOXN3-209ENST00000555353 Q8N814 137 aa13.58□□□□□ -0.24
FOXN3-209ENST00000555353 FUSP35637 526 aaKnown RBP eCLIP13.57□□□□□ -0.243e-8■□□□□ 10.9
FOXN3-209ENST00000555353 IGLV10-54A0A075B6I4 117 aa13.56□□□□□ -0.24
FOXN3-209ENST00000555353 F8VRH5 84 aa13.56□□□□□ -0.24
FOXN3-209ENST00000555353 WFDC2Q14508 124 aa13.56□□□□□ -0.24
FOXN3-209ENST00000555353 DYNC1H1Q14204 4646 aaKnown RBP13.55□□□□□ -0.24
FOXN3-209ENST00000555353 ODF1Q14990 250 aa13.55□□□□□ -0.24
FOXN3-209ENST00000555353 GEMIN7Q9H840 131 aaKnown RBP13.55□□□□□ -0.24
FOXN3-209ENST00000555353 AKR1D1P51857 326 aa13.54□□□□□ -0.24
FOXN3-209ENST00000555353 NTN5Q8WTR8 489 aaPredicted RBP13.54□□□□□ -0.24
FOXN3-209ENST00000555353 A0A0J9YXV3 536 aa13.54□□□□□ -0.24
FOXN3-209ENST00000555353 HERVK_113P63121 156 aa13.54□□□□□ -0.24
FOXN3-209ENST00000555353 FAM19A3Q7Z5A8 133 aa13.54□□□□□ -0.24
FOXN3-209ENST00000555353 CHCHD10Q8WYQ3 142 aaPredicted RBP13.54□□□□□ -0.24
FOXN3-209ENST00000555353 MRPL35Q9NZE8 188 aaKnown RBP13.54□□□□□ -0.24
FOXN3-209ENST00000555353 IGLV5-52A0A0A0MRZ9 124 aa13.53□□□□□ -0.24
FOXN3-209ENST00000555353 TINCRA0A1B0GVN0 87 aa13.53□□□□□ -0.24
FOXN3-209ENST00000555353 XCL1P47992 114 aa13.53□□□□□ -0.24
FOXN3-209ENST00000555353 LINC00242Q5T6M2 205 aa13.53□□□□□ -0.24
FOXN3-209ENST00000555353 LINC01545Q5VT33 79 aa13.53□□□□□ -0.24
FOXN3-209ENST00000555353 IGLC3P0DOY3 106 aa13.52□□□□□ -0.25
FOXN3-209ENST00000555353 PLNP26678 52 aa13.52□□□□□ -0.25
FOXN3-209ENST00000555353 CD164L2Q6UWJ8 174 aa13.52□□□□□ -0.25
FOXN3-209ENST00000555353 DPM2O94777 84 aa13.51□□□□□ -0.25
FOXN3-209ENST00000555353 CHAC1Q9BUX1 264 aa13.51□□□□□ -0.25
FOXN3-209ENST00000555353 IGLV4-69A0A075B6H9 119 aa13.5□□□□□ -0.25
FOXN3-209ENST00000555353 C14orf177Q52M58 125 aa13.5□□□□□ -0.25
FOXN3-209ENST00000555353 KRTAP26-1Q6PEX3 210 aa13.5□□□□□ -0.25
FOXN3-209ENST00000555353 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.49□□□□□ -0.25
FOXN3-209ENST00000555353 IGKCP01834 107 aa13.49□□□□□ -0.25
FOXN3-209ENST00000555353 PMCHL2Q9BQD1 86 aa13.49□□□□□ -0.25
FOXN3-209ENST00000555353 GAGE12HA6NDE8 117 aa13.49□□□□□ -0.25
FOXN3-209ENST00000555353 SCGB1D1O95968 90 aa13.49□□□□□ -0.25
FOXN3-209ENST00000555353 LINC00469Q8N7U9 141 aa13.49□□□□□ -0.25
FOXN3-209ENST00000555353 USP17L23D6RBM5 183 aa13.48□□□□□ -0.25
FOXN3-209ENST00000555353 GCSHP23434 173 aa13.48□□□□□ -0.25
FOXN3-209ENST00000555353 C11orf86A6NJI1 115 aa13.47□□□□□ -0.25
FOXN3-209ENST00000555353 H3BRM9 83 aa13.47□□□□□ -0.25
FOXN3-209ENST00000555353 DNAH5Q8TE73 4624 aa13.47□□□□□ -0.25
FOXN3-209ENST00000555353 IGHV3OR16-9A0A0B4J2B5 98 aa13.46□□□□□ -0.25
FOXN3-209ENST00000555353 COX6A2Q02221 97 aa13.46□□□□□ -0.25
FOXN3-209ENST00000555353 TMEM170BQ5T4T1 132 aa13.46□□□□□ -0.25
FOXN3-209ENST00000555353 LRP1BQ9NZR2 4599 aa13.46□□□□□ -0.26
FOXN3-209ENST00000555353 COX7A2LO14548 114 aa13.45□□□□□ -0.26
FOXN3-209ENST00000555353 FOXI1Q12951 378 aa13.45□□□□□ -0.26
FOXN3-209ENST00000555353 KIAA1109Q2LD37 5005 aa13.45□□□□□ -0.26
FOXN3-209ENST00000555353 IGLV5-45A0A087WSX0 123 aa13.45□□□□□ -0.26
FOXN3-209ENST00000555353 ZNF22P17026 224 aaPredicted RBP13.45□□□□□ -0.26
FOXN3-209ENST00000555353 JOSD1Q15040 202 aaPredicted RBP13.45□□□□□ -0.26
FOXN3-209ENST00000555353 CDKN2A-AS1Q9UH64 79 aa13.45□□□□□ -0.26
FOXN3-209ENST00000555353 CDK2AP2O75956 126 aa13.44□□□□□ -0.26
FOXN3-209ENST00000555353 MALP21145 153 aa13.44□□□□□ -0.26
FOXN3-209ENST00000555353 C5orf38Q86SI9 138 aa13.44□□□□□ -0.26
FOXN3-209ENST00000555353 A0A087WZ39 114 aa13.43□□□□□ -0.26
FOXN3-209ENST00000555353 KRTAP10-1P60331 282 aa13.43□□□□□ -0.26
FOXN3-209ENST00000555353 APOMO95445 188 aa13.42□□□□□ -0.26
FOXN3-209ENST00000555353 LINC01561Q8N1V8 128 aa13.42□□□□□ -0.26
FOXN3-209ENST00000555353 LOC105371267A0A1B0GV96 52 aa13.41□□□□□ -0.26
FOXN3-209ENST00000555353 HERVK_113P61574 105 aa13.41□□□□□ -0.26
FOXN3-209ENST00000555353 CFAP161Q6P656 301 aa13.4□□□□□ -0.26
FOXN3-209ENST00000555353 ATOH7Q8N100 152 aa13.39□□□□□ -0.27
FOXN3-209ENST00000555353 hDV102S1A0JD36 115 aa13.38□□□□□ -0.27
FOXN3-209ENST00000555353 HSBP1L1C9JCN9 74 aa13.38□□□□□ -0.27
FOXN3-209ENST00000555353 IGHV1-58A0A0C4DH39 117 aa13.37□□□□□ -0.27
FOXN3-209ENST00000555353 TMEM223A0PJW6 202 aa13.37□□□□□ -0.27
FOXN3-209ENST00000555353 SPINK8P0C7L1 97 aa13.37□□□□□ -0.27
FOXN3-209ENST00000555353 PYY3Q5JQD4 70 aa13.37□□□□□ -0.27
FOXN3-209ENST00000555353 SMIM1B2RUZ4 78 aa13.36□□□□□ -0.27
FOXN3-209ENST00000555353 LINC01620Q4KN68 170 aa13.35□□□□□ -0.27
FOXN3-209ENST00000555353 IGHV3-64A0A075B6Q5 118 aa13.34□□□□□ -0.27
FOXN3-209ENST00000555353 C15orf56Q8N910 161 aa13.34□□□□□ -0.27
FOXN3-209ENST00000555353 ORAOV1Q8WV07 137 aa13.34□□□□□ -0.27
FOXN3-209ENST00000555353 PRSS2P07478 247 aa13.33□□□□□ -0.28
FOXN3-209ENST00000555353 STPG4Q8N801 248 aa13.33□□□□□ -0.28
FOXN3-209ENST00000555353 APOBP04114 4563 aaKnown RBP13.32□□□□□ -0.28
FOXN3-209ENST00000555353 IGLV5-39A0A0G2JS06 123 aa13.32□□□□□ -0.28
FOXN3-209ENST00000555353 HIGD2BQ4VC39 106 aa13.32□□□□□ -0.28
FOXN3-209ENST00000555353 PLEKHB2Q96CS7 222 aa13.32□□□□□ -0.28
FOXN3-209ENST00000555353 TOMM7Q9P0U1 55 aa13.32□□□□□ -0.28
FOXN3-209ENST00000555353 E9PLD3 99 aa13.31□□□□□ -0.28
FOXN3-209ENST00000555353 ZNF561-AS1K7EIQ3 104 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms