RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
SRP54-206ENST00000555317 SMCO4Q9NRQ5 59 aa7.81□□□□□ -1.16
SRP54-206ENST00000555317 TRAPPC1Q9Y5R8 145 aa7.81□□□□□ -1.16
SRP54-206ENST00000555317 FA2HQ7L5A8 372 aa7.8□□□□□ -1.16
SRP54-206ENST00000555317 C5orf38Q86SI9 138 aa7.8□□□□□ -1.16
SRP54-206ENST00000555317 CARD19Q96LW7 228 aa7.8□□□□□ -1.16
SRP54-206ENST00000555317 ALKBH7Q9BT30 221 aaPredicted RBP7.8□□□□□ -1.16
SRP54-206ENST00000555317 VCX2Q9H322 139 aa7.8□□□□□ -1.16
SRP54-206ENST00000555317 DNAH8Q96JB1 4490 aa7.8□□□□□ -1.16
SRP54-206ENST00000555317 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
SRP54-206ENST00000555317 SLPIP03973 132 aa7.79□□□□□ -1.16
SRP54-206ENST00000555317 PLA2G1BP04054 148 aaKnown RBP7.79□□□□□ -1.16
SRP54-206ENST00000555317 NPSP0C0P6 89 aa7.79□□□□□ -1.16
SRP54-206ENST00000555317 SDIM1Q6ZPB5 146 aa7.79□□□□□ -1.16
SRP54-206ENST00000555317 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
SRP54-206ENST00000555317 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
SRP54-206ENST00000555317 LINC01549A6NIU2 74 aa7.78□□□□□ -1.16
SRP54-206ENST00000555317 SYCNQ0VAF6 134 aa7.78□□□□□ -1.16
SRP54-206ENST00000555317 FAM104AQ969W3 186 aa7.78□□□□□ -1.16
SRP54-206ENST00000555317 LINC00526Q96FQ7 95 aa7.78□□□□□ -1.16
SRP54-206ENST00000555317 KRTAP17-1Q9BYP8 105 aa7.78□□□□□ -1.16
SRP54-206ENST00000555317 COX6A2Q02221 97 aa7.77□□□□□ -1.17
SRP54-206ENST00000555317 SPAG11BQ08648 103 aa7.77□□□□□ -1.17
SRP54-206ENST00000555317 OR10D4PQ8NGN7 298 aa7.77□□□□□ -1.17
SRP54-206ENST00000555317 ORAOV1Q8WV07 137 aa7.77□□□□□ -1.17
SRP54-206ENST00000555317 TOMM6Q96B49 74 aa7.77□□□□□ -1.17
SRP54-206ENST00000555317 SCGB3A1Q96QR1 104 aa7.77□□□□□ -1.17
SRP54-206ENST00000555317 CAMK2N2Q96S95 79 aa7.77□□□□□ -1.17
SRP54-206ENST00000555317 TIMM17AQ99595 171 aa7.77□□□□□ -1.17
SRP54-206ENST00000555317 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
SRP54-206ENST00000555317 IGLV4-69A0A075B6H9 119 aa7.76□□□□□ -1.17
SRP54-206ENST00000555317 IGKV2-24A0A0C4DH68 120 aa7.76□□□□□ -1.17
SRP54-206ENST00000555317 IGIPA6NJ69 53 aa7.76□□□□□ -1.17
SRP54-206ENST00000555317 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 CHTF8P0CG12 524 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 INAFM2P0DMQ5 153 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 UBE2D1P51668 147 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 SEC11AP67812 179 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 LINC00242Q5T6M2 205 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 ERASQ7Z444 233 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 AMELXQ99217 191 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 LINC00474Q9P2X8 69 aa7.75□□□□□ -1.17
SRP54-206ENST00000555317 LINC01546A6NGU7 62 aa7.74□□□□□ -1.17
SRP54-206ENST00000555317 RAB5BP61020 215 aa7.74□□□□□ -1.17
SRP54-206ENST00000555317 MAJINQ3KP22 176 aa7.74□□□□□ -1.17
SRP54-206ENST00000555317 SLC7A5P1Q8MH63 180 aa7.74□□□□□ -1.17
SRP54-206ENST00000555317 SPACA4Q8TDM5 124 aa7.74□□□□□ -1.17
SRP54-206ENST00000555317 GEMIN7Q9H840 131 aaKnown RBP7.74□□□□□ -1.17
SRP54-206ENST00000555317 FAT1Q14517 4588 aa7.74□□□□□ -1.17
SRP54-206ENST00000555317 FLG2Q5D862 2391 aaPredicted RBP7.73□□□□□ -1.17
SRP54-206ENST00000555317 A0A087WZ39 114 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 LOC107984640A0A0U1RRK4 108 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 F8WDY8 70 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 PANO1I0J062 215 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 NDUFA1O15239 70 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 CIRBPQ14011 172 aaKnown RBP7.73□□□□□ -1.17
SRP54-206ENST00000555317 ZC2HC1BQ5TFG8 222 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 Q6ZRU5 148 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 LINC00173Q6ZV60 143 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 CBLN2Q8IUK8 224 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 C18orf32Q8TCD1 76 aa7.73□□□□□ -1.17
SRP54-206ENST00000555317 HERVK_113P63121 156 aa7.72□□□□□ -1.17
SRP54-206ENST00000555317 PACRGQ96M98 296 aaPredicted RBP7.72□□□□□ -1.17
SRP54-206ENST00000555317 A0A087WYN8 130 aa7.71□□□□□ -1.18
SRP54-206ENST00000555317 A0A096LNI7 61 aa7.71□□□□□ -1.18
SRP54-206ENST00000555317 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
SRP54-206ENST00000555317 PRSS2P07478 247 aa7.71□□□□□ -1.18
SRP54-206ENST00000555317 LINC00614P0C842 121 aa7.71□□□□□ -1.18
SRP54-206ENST00000555317 RPL37AP61513 92 aaKnown RBP7.71□□□□□ -1.18
SRP54-206ENST00000555317 RPL18AQ02543 176 aaKnown RBP7.71□□□□□ -1.18
SRP54-206ENST00000555317 DMBT1Q9UGM3 2413 aaPredicted RBP7.7□□□□□ -1.18
SRP54-206ENST00000555317 HBDP02042 147 aa7.7□□□□□ -1.18
SRP54-206ENST00000555317 GAGE2BQ13066 116 aa7.7□□□□□ -1.18
SRP54-206ENST00000555317 LINC01561Q8N1V8 128 aa7.7□□□□□ -1.18
SRP54-206ENST00000555317 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
SRP54-206ENST00000555317 STPG4Q8N801 248 aa7.7□□□□□ -1.18
SRP54-206ENST00000555317 C7orf33Q8WU49 177 aa7.7□□□□□ -1.18
SRP54-206ENST00000555317 PTTG1IPP53801 180 aa7.69□□□□□ -1.18
SRP54-206ENST00000555317 NDUFA6P56556 154 aa7.69□□□□□ -1.18
SRP54-206ENST00000555317 PMVKQ15126 192 aa7.69□□□□□ -1.18
SRP54-206ENST00000555317 RNF151Q2KHN1 245 aa7.69□□□□□ -1.18
SRP54-206ENST00000555317 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
SRP54-206ENST00000555317 YPEL4Q96NS1 127 aa7.69□□□□□ -1.18
SRP54-206ENST00000555317 MRPL35Q9NZE8 188 aaKnown RBP7.69□□□□□ -1.18
SRP54-206ENST00000555317 PLAC8Q9NZF1 115 aa7.69□□□□□ -1.18
SRP54-206ENST00000555317 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
SRP54-206ENST00000555317 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
SRP54-206ENST00000555317 CKS1BP61024 79 aa7.68□□□□□ -1.18
SRP54-206ENST00000555317 CST9LQ9H4G1 147 aa7.68□□□□□ -1.18
SRP54-206ENST00000555317 TINCRA0A1B0GVN0 87 aa7.67□□□□□ -1.18
SRP54-206ENST00000555317 ATP5LO75964 103 aa7.67□□□□□ -1.18
SRP54-206ENST00000555317 PMCHL1Q16048 86 aa7.67□□□□□ -1.18
SRP54-206ENST00000555317 C6orf226Q5I0X4 101 aa7.67□□□□□ -1.18
SRP54-206ENST00000555317 UNQ6190/PRO20217Q6UXQ8 127 aa7.67□□□□□ -1.18
SRP54-206ENST00000555317 CDKN2A-AS1Q9UH64 79 aa7.67□□□□□ -1.18
SRP54-206ENST00000555317 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
SRP54-206ENST00000555317 H3BRM9 83 aa7.66□□□□□ -1.18
SRP54-206ENST00000555317 BAGE3Q86Y29 109 aa7.66□□□□□ -1.18
SRP54-206ENST00000555317 CHCHD1Q96BP2 118 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms