RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 AKR1C3P42330 323 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 TCTAP57738 103 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 S100A10P60903 97 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 RHOBP62745 196 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 CCL20P78556 96 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 PDE6HQ13956 83 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 NDUFA5Q16718 116 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 ACOT6Q3I5F7 207 aaPredicted RBP1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 IBA57Q5T440 356 aaKnown RBP1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 C10orf113Q5VZT2 155 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 C10orf99Q6UWK7 81 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 LCN15Q6UWW0 184 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 TMEM14EPQ6UXP3 125 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 CYP2G1PQ6ZSU1 146 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 PPP1R1CQ8WVI7 109 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 NAA38Q9BRA0 125 aaKnown RBP1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 SLC50A1Q9BRV3 221 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 WDR61Q9GZS3 305 aaKnown RBP1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 SLC39A9Q9NUM3 307 aa1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 ANK3Q12955 4377 aaKnown RBP1.93□□□□□ -2.1
CKS1BP1-201ENST00000555221 TRBV10-2A0A0K0K1G8 114 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 A0A1B0GW64 132 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 FABP5P3A8MUU1 101 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 UMAD1C9J7I0 102 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 F6UZH7 168 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 MPC2O95563 127 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 NMBP08949 121 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 METTL15P1P0C7V9 234 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 TRGC1P0CF51 173 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 ZNF705BP0CI00 300 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 RAB5CP51148 216 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 FXYD2P54710 66 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 RRAS2P62070 204 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 IFITM2Q01629 132 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 SPINK9Q5DT21 86 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 FOXI2Q6ZQN5 318 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 TCEAL7Q9BRU2 100 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 MRPL32Q9BYC8 188 aaKnown RBP1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 SH3BGRL3Q9H299 93 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 TMEM167BQ9NRX6 74 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 TNFSF18Q9UNG2 199 aa1.92□□□□□ -2.1
CKS1BP1-201ENST00000555221 KANTRA0A1W2PQU2 76 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 FAM24AA6NFZ4 105 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 PFDN1O60925 122 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 CST7O76096 145 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 SLC25A5P05141 298 aaKnown RBP1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 NBEAP1P0C6P0 100 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 MIFP14174 115 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 FGF7P21781 194 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 KHDC3LQ587J8 217 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 AKR1C8PQ5T2L2 129 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 DPPA3Q6W0C5 159 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 LINC00305Q7Z4B0 112 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 OR2T35Q8NGX2 323 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 HYLS1Q96M11 299 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 LINC00052Q96N35 136 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 AQP10Q96PS8 301 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 PSMG3Q9BT73 122 aaPredicted RBP1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 TMEM14CQ9P0S9 112 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 HSPB11Q9Y547 144 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 LENEPQ9Y5L5 61 aa1.91□□□□□ -2.1
CKS1BP1-201ENST00000555221 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 RBAKDNA6NC62 111 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 H7BYZ3 331 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 K7EIL1 84 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 DEFB131AP59861 70 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 ZNF345Q14585 488 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 PSMG4Q5JS54 123 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 TMEM78Q5T7P6 136 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 C7orf65Q6ZTY9 151 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 OR4B1Q8NGF8 309 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 ODF3Q96PU9 254 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 NPCDR1Q9BY65 106 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 BIN3Q9NQY0 253 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 ARL2-SNX15V9GYD0 113 aa1.9□□□□□ -2.11
CKS1BP1-201ENST00000555221 FAT4Q6V0I7 4981 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 IGKV3-7A0A075B6H7 116 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 FXYD6-FXYD2A0A087WZ82 144 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 UBE2L5PA0A1B0GUS4 154 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 A0A1W2PRE2 83 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 NUPR2A6NF83 97 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 SIX6O95475 246 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 IFNA1P01562 189 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 IFNA7P01567 189 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 SPART-AS1P0CW21 52 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 TPT1P13693 172 aaKnown RBP1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HLA-DRB4P13762 266 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST1H2BOP23527 126 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST1H2BBP33778 126 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST1H2BDP58876 126 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST1H2BCP62807 126 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST2H2BEQ16778 126 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 RRN3P1Q2M238 152 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 LINC00322Q6ZN03 302 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 AKAP14Q86UN6 197 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 SBSPONQ8IVN8 264 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 MBD3L1Q8WWY6 194 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST1H2BHQ93079 126 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms