RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 LINC00643Q86TS7 51 aa6.4□□□□□ -1.38
SYNE2-217ENST00000555022 NOTCH2Q04721 2471 aa6.4□□□□□ -1.39
SYNE2-217ENST00000555022 C4orf26Q17RF5 130 aa6.4□□□□□ -1.39
SYNE2-217ENST00000555022 A0A096LPF7 62 aa6.39□□□□□ -1.39
SYNE2-217ENST00000555022 K7EQG2 157 aa6.39□□□□□ -1.39
SYNE2-217ENST00000555022 LINC00337Q8N6G1 96 aa6.39□□□□□ -1.39
SYNE2-217ENST00000555022 TMEM126AQ9H061 195 aa6.39□□□□□ -1.39
SYNE2-217ENST00000555022 LINC00846Q9NV44 126 aa6.39□□□□□ -1.39
SYNE2-217ENST00000555022 RPL36AP83881 106 aaKnown RBP6.39□□□□□ -1.39
SYNE2-217ENST00000555022 DEFB112Q30KQ8 113 aa6.39□□□□□ -1.39
SYNE2-217ENST00000555022 RPL36ALQ969Q0 106 aaKnown RBP6.39□□□□□ -1.39
SYNE2-217ENST00000555022 UQCRQO14949 82 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 MALP21145 153 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 C5orf47Q569G3 176 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 NDUFA1O15239 70 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 Q96MF0 132 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 SND1-IT1Q9HBX3 110 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 SMIM9A6NGZ8 99 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 Q6ZTI0 123 aa6.38□□□□□ -1.39
SYNE2-217ENST00000555022 J3KT08 172 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 DNAJC30Q96LL9 226 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 C22orf24Q9Y442 160 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 TRACP01848 142 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 COX7CP15954 63 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 SMIM11BQ8TCY0 68 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 UBE2L6O14933 153 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 OXTP01178 125 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 CXCL5P42830 114 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 DYNLRB2Q8TF09 96 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 WFDC10AQ9H1F0 79 aa6.37□□□□□ -1.39
SYNE2-217ENST00000555022 A6NDX4 124 aa6.36□□□□□ -1.39
SYNE2-217ENST00000555022 K7ENP7 123 aa6.36□□□□□ -1.39
SYNE2-217ENST00000555022 FAM19A1Q7Z5A9 133 aa6.36□□□□□ -1.39
SYNE2-217ENST00000555022 SPANXA1Q9NS26 97 aa6.36□□□□□ -1.39
SYNE2-217ENST00000555022 FAM240AA0A1B0GVK7 77 aa6.36□□□□□ -1.39
SYNE2-217ENST00000555022 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
SYNE2-217ENST00000555022 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
SYNE2-217ENST00000555022 A8MTW9 85 aa6.35□□□□□ -1.39
SYNE2-217ENST00000555022 RPL35AP18077 110 aaKnown RBP6.35□□□□□ -1.39
SYNE2-217ENST00000555022 GNLYP22749 145 aa6.35□□□□□ -1.39
SYNE2-217ENST00000555022 NTM-AS1Q6ZSK4 140 aa6.35□□□□□ -1.39
SYNE2-217ENST00000555022 NOP10Q9NPE3 64 aaKnown RBP6.35□□□□□ -1.39
SYNE2-217ENST00000555022 PYGO1Q9Y3Y4 419 aa6.35□□□□□ -1.39
SYNE2-217ENST00000555022 AKAP9Q99996 3911 aa6.34□□□□□ -1.39
SYNE2-217ENST00000555022 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
SYNE2-217ENST00000555022 WFDC11Q8NEX6 87 aa6.34□□□□□ -1.39
SYNE2-217ENST00000555022 CCL19Q99731 98 aa6.34□□□□□ -1.39
SYNE2-217ENST00000555022 USP17L23D6RBM5 183 aa6.34□□□□□ -1.39
SYNE2-217ENST00000555022 IGLV1-40P01703 118 aa6.34□□□□□ -1.39
SYNE2-217ENST00000555022 ZNF462Q96JM2 2506 aa6.34□□□□□ -1.39
SYNE2-217ENST00000555022 TRGV2A0A075B6R0 118 aa6.34□□□□□ -1.4
SYNE2-217ENST00000555022 XCL1P47992 114 aa6.34□□□□□ -1.4
SYNE2-217ENST00000555022 ENHOQ6UWT2 76 aa6.34□□□□□ -1.4
SYNE2-217ENST00000555022 SCXQ7RTU7 201 aa6.34□□□□□ -1.4
SYNE2-217ENST00000555022 C1orf43Q9BWL3 253 aa6.34□□□□□ -1.4
SYNE2-217ENST00000555022 IGKV2-28A0A075B6P5 120 aa6.33□□□□□ -1.4
SYNE2-217ENST00000555022 IGKV2D-28P01615 120 aa6.33□□□□□ -1.4
SYNE2-217ENST00000555022 C2orf48Q96LS8 159 aa6.33□□□□□ -1.4
SYNE2-217ENST00000555022 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
SYNE2-217ENST00000555022 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 INAFM2P0DMQ5 153 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 PSMB8P28062 276 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 CCL18P55774 89 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 F8P00451 2351 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 GHRHP01286 108 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 RPL18AQ02543 176 aaKnown RBP6.32□□□□□ -1.4
SYNE2-217ENST00000555022 BEAN1Q3B7T3 259 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 DEFB121Q5J5C9 76 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 LINC01561Q8N1V8 128 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 SNURFQ9Y675 71 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 ACYP1P07311 99 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 MSMBP08118 114 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 HIST2H2BCQ6DN03 193 aa6.32□□□□□ -1.4
SYNE2-217ENST00000555022 DOPEY1Q5JWR5 2465 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 IGLV4-60A0A075B6I1 120 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 ATOX1O00244 68 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 FBXL19-AS1Q494R0 122 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 COX7B2Q8TF08 81 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 DEFB130BP0DP73 79 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 DEFB130AP0DP74 79 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 RPL28P46779 137 aaKnown RBP6.31□□□□□ -1.4
SYNE2-217ENST00000555022 FHL2Q14192 279 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 C9orf116Q5BN46 136 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-217ENST00000555022 MAP6D1Q9H9H5 199 aa6.31□□□□□ -1.4
SYNE2-217ENST00000555022 B4DSR2 109 aa6.3□□□□□ -1.4
SYNE2-217ENST00000555022 F5H768 121 aa6.3□□□□□ -1.4
SYNE2-217ENST00000555022 LRRC75A-AS1Q8N1F1 130 aa6.3□□□□□ -1.4
SYNE2-217ENST00000555022 PKIGQ9Y2B9 76 aa6.3□□□□□ -1.4
SYNE2-217ENST00000555022 KMT2BQ9UMN6 2715 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-217ENST00000555022 K7EMT4 169 aa6.3□□□□□ -1.4
SYNE2-217ENST00000555022 INSP01308 110 aa6.3□□□□□ -1.4
SYNE2-217ENST00000555022 HAMPP81172 84 aa6.3□□□□□ -1.4
SYNE2-217ENST00000555022 C6orf226Q5I0X4 101 aa6.29□□□□□ -1.4
SYNE2-217ENST00000555022 DPH3Q96FX2 82 aa6.29□□□□□ -1.4
SYNE2-217ENST00000555022 IGLV5-39A0A0G2JS06 123 aa6.29□□□□□ -1.4
SYNE2-217ENST00000555022 STHQ8IWL8 128 aa6.29□□□□□ -1.4
SYNE2-217ENST00000555022 C11orf72Q8NBR9 251 aa6.29□□□□□ -1.4
SYNE2-217ENST00000555022 FLNAP21333 2647 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms