RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 VSIG2Q96IQ7 327 aa6.21□□□□□ -1.41
TDP1-210ENST00000554976 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.41
TDP1-210ENST00000554976 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
TDP1-210ENST00000554976 H7C423 109 aa6.21□□□□□ -1.42
TDP1-210ENST00000554976 UBE2D1P51668 147 aa6.21□□□□□ -1.42
TDP1-210ENST00000554976 TSPEAR-AS2P59090 65 aa6.21□□□□□ -1.42
TDP1-210ENST00000554976 PAPPA-AS1Q5QFB9 102 aa6.21□□□□□ -1.42
TDP1-210ENST00000554976 FLNBO75369 2602 aaKnown RBP6.21□□□□□ -1.42
TDP1-210ENST00000554976 TRGV4A0A0C4DH28 118 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 DEFB130BP0DP73 79 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 DEFB130AP0DP74 79 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 TEN1Q86WV5 123 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 NMUP48645 174 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 TTC32Q5I0X7 151 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 DEFB4AO15263 64 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 C12orf74Q32Q52 190 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 CARD19Q96LW7 228 aa6.2□□□□□ -1.42
TDP1-210ENST00000554976 C11orf68Q9H3H3 251 aaKnown RBP6.2□□□□□ -1.42
TDP1-210ENST00000554976 A0A0J9YXV3 536 aa6.19□□□□□ -1.42
TDP1-210ENST00000554976 MEIG1Q5JSS6 88 aa6.19□□□□□ -1.42
TDP1-210ENST00000554976 TRBV25-1A0A075B6N4 114 aa6.19□□□□□ -1.42
TDP1-210ENST00000554976 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
TDP1-210ENST00000554976 PRADC1Q9BSG0 188 aa6.19□□□□□ -1.42
TDP1-210ENST00000554976 RETNQ9HD89 108 aa6.19□□□□□ -1.42
TDP1-210ENST00000554976 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
TDP1-210ENST00000554976 PRO0255Q9UI72 69 aa6.19□□□□□ -1.42
TDP1-210ENST00000554976 TRBV20-1A0A075B6N2 111 aa6.18□□□□□ -1.42
TDP1-210ENST00000554976 RNASE13Q5GAN3 156 aaKnown RBP6.18□□□□□ -1.42
TDP1-210ENST00000554976 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
TDP1-210ENST00000554976 DNAH1Q9P2D7 4330 aa6.18□□□□□ -1.42
TDP1-210ENST00000554976 SNCGO76070 127 aa6.18□□□□□ -1.42
TDP1-210ENST00000554976 MYMXA0A1B0GTQ4 84 aa6.17□□□□□ -1.42
TDP1-210ENST00000554976 TIRAPP58753 221 aa6.17□□□□□ -1.42
TDP1-210ENST00000554976 MDFIQ99750 246 aa6.17□□□□□ -1.42
TDP1-210ENST00000554976 NOTCH3Q9UM47 2321 aa6.17□□□□□ -1.42
TDP1-210ENST00000554976 LEPROTO15243 131 aa6.17□□□□□ -1.42
TDP1-210ENST00000554976 GYPEP15421 78 aa6.17□□□□□ -1.42
TDP1-210ENST00000554976 COX6A2Q02221 97 aa6.17□□□□□ -1.42
TDP1-210ENST00000554976 TMEM243Q9BU79 118 aa6.17□□□□□ -1.42
TDP1-210ENST00000554976 SPART-AS1P0CW21 52 aa6.16□□□□□ -1.42
TDP1-210ENST00000554976 LINC00242Q5T6M2 205 aa6.16□□□□□ -1.42
TDP1-210ENST00000554976 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
TDP1-210ENST00000554976 DNAH9Q9NYC9 4486 aa6.16□□□□□ -1.42
TDP1-210ENST00000554976 K7EIL1 84 aa6.15□□□□□ -1.42
TDP1-210ENST00000554976 DAD1P61803 113 aa6.15□□□□□ -1.42
TDP1-210ENST00000554976 IGLV4-60A0A075B6I1 120 aa6.15□□□□□ -1.43
TDP1-210ENST00000554976 A0A1B0GX51 115 aa6.15□□□□□ -1.43
TDP1-210ENST00000554976 F5H768 121 aa6.15□□□□□ -1.43
TDP1-210ENST00000554976 ATP5G1P05496 136 aa6.15□□□□□ -1.43
TDP1-210ENST00000554976 TM2D3Q9BRN9 247 aa6.15□□□□□ -1.43
TDP1-210ENST00000554976 STAB1Q9NY15 2570 aa6.14□□□□□ -1.43
TDP1-210ENST00000554976 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
TDP1-210ENST00000554976 J3KT08 172 aa6.14□□□□□ -1.43
TDP1-210ENST00000554976 TMEM170BQ5T4T1 132 aa6.14□□□□□ -1.43
TDP1-210ENST00000554976 LYRM7Q5U5X0 104 aa6.14□□□□□ -1.43
TDP1-210ENST00000554976 A0A1B0GUV1 79 aa6.14□□□□□ -1.43
TDP1-210ENST00000554976 PAX4O43316 350 aa6.14□□□□□ -1.43
TDP1-210ENST00000554976 IGHV1-58A0A0C4DH39 117 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 A0A0J9YY99 117 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 H3BNG1 76 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 J3QQQ9 107 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 HERVK_113P61574 105 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 LITAFQ99732 161 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 A0A096LPF7 62 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 IGHV3-30-3P0DP02 117 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 OR13C6PQ8NH95 151 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 SPANXCQ9NY87 97 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 CDKN2A-AS1Q9UH64 79 aa6.13□□□□□ -1.43
TDP1-210ENST00000554976 ZNF815PA8K554 130 aa6.12□□□□□ -1.43
TDP1-210ENST00000554976 FAM19A5Q7Z5A7 132 aaPredicted RBP6.12□□□□□ -1.43
TDP1-210ENST00000554976 C10orf126Q8N4M7 172 aa6.12□□□□□ -1.43
TDP1-210ENST00000554976 TRAV8-3A0A0A6YYJ7 113 aa6.12□□□□□ -1.43
TDP1-210ENST00000554976 NBEAL2Q6ZNJ1 2754 aa6.12□□□□□ -1.43
TDP1-210ENST00000554976 SMIM1B2RUZ4 78 aa6.12□□□□□ -1.43
TDP1-210ENST00000554976 HERVK_113P63121 156 aa6.12□□□□□ -1.43
TDP1-210ENST00000554976 MRPL23Q16540 153 aaKnown RBP6.12□□□□□ -1.43
TDP1-210ENST00000554976 ANKRD29Q8N6D5 301 aa6.12□□□□□ -1.43
TDP1-210ENST00000554976 F8WDY8 70 aa6.11□□□□□ -1.43
TDP1-210ENST00000554976 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
TDP1-210ENST00000554976 MRAPQ8TCY5 172 aa6.11□□□□□ -1.43
TDP1-210ENST00000554976 TMEM101Q96IK0 257 aa6.11□□□□□ -1.43
TDP1-210ENST00000554976 C9JAW5 83 aa6.11□□□□□ -1.43
TDP1-210ENST00000554976 UBE2L6O14933 153 aa6.11□□□□□ -1.43
TDP1-210ENST00000554976 A0A0J9YWU9 116 aa6.1□□□□□ -1.43
TDP1-210ENST00000554976 HIST1H4GQ99525 98 aa6.1□□□□□ -1.43
TDP1-210ENST00000554976 PSMB2P49721 201 aa6.1□□□□□ -1.43
TDP1-210ENST00000554976 Q6ZTC4 211 aa6.1□□□□□ -1.43
TDP1-210ENST00000554976 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
TDP1-210ENST00000554976 IGHV3-64A0A075B6Q5 118 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 LOC107984640A0A0U1RRK4 108 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 IGHV3-30P01768 117 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 PRB2P02812 416 aaPredicted RBP6.09□□□□□ -1.43
TDP1-210ENST00000554976 IGHV3-30-5P0DP03 117 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 DNAH7Q8WXX0 4024 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 IGHV3OR16-9A0A0B4J2B5 98 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 A0A0J9YXY3 114 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 DGAT2L7PQ6IED9 249 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 Q8N3U1 123 aa6.09□□□□□ -1.43
TDP1-210ENST00000554976 ICOSQ9Y6W8 199 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms