RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 COPS9Q8WXC6 57 aa-0.83□□□□□ -2.54
CFAP54-207ENST00000554821 MGST2Q99735 147 aa-0.83□□□□□ -2.54
CFAP54-207ENST00000554821 TEP1Q99973 2627 aaKnown RBP-0.83□□□□□ -2.54
CFAP54-207ENST00000554821 GNG7O60262 68 aa-0.84□□□□□ -2.54
CFAP54-207ENST00000554821 APOC3P02656 99 aa-0.84□□□□□ -2.54
CFAP54-207ENST00000554821 TPPP2P59282 170 aa-0.84□□□□□ -2.54
CFAP54-207ENST00000554821 LINC00470Q9BZP3 86 aa-0.84□□□□□ -2.54
CFAP54-207ENST00000554821 DSPP15924 2871 aaKnown RBP-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 PHLPP1O60346 1717 aa-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 SPRR2EP22531 72 aa-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 KRTAP6-2Q3LI66 62 aa-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 SPANXDQ9BXN6 97 aa-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 NSD3Q9BZ95 1437 aa-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 LINC00474Q9P2X8 69 aa-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 MYO18BQ8IUG5 2567 aa-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 USP9XQ93008 2570 aaPredicted RBP-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 PSME4Q14997 1843 aa-0.85□□□□□ -2.55
CFAP54-207ENST00000554821 DNAH6Q9C0G6 4158 aa-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 PCNX1Q96RV3 2341 aa-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 RNF213Q63HN8 5207 aa-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 CPSF1Q10570 1443 aaKnown RBP-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 LOC100130705A0A1B0GUX0 176 aa-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 MIF4GDA9UHW6 222 aaKnown RBP-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 SPRR2AP35326 72 aa-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 SELENOWP63302 87 aa-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 NAA60Q9H7X0 242 aa-0.86□□□□□ -2.55
CFAP54-207ENST00000554821 FOCADQ5VW36 1801 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 DNAH3Q8TD57 4116 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 FAM25AB3EWG3 89 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 FAM25CB3EWG5 89 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 FAM25GB3EWG6 89 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 SFT2D2O95562 160 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 ARL11Q969Q4 196 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 PPP3R2Q96LZ3 170 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 FXYD6Q9H0Q3 95 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 PAIP2BQ9ULR5 123 aaKnown RBP-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 UNC13AQ9UPW8 1703 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 BTAF1O14981 1849 aa-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 PRRC2CQ9Y520 2896 aaKnown RBP-0.87□□□□□ -2.55
CFAP54-207ENST00000554821 ARHGEF12Q9NZN5 1544 aa-0.88□□□□□ -2.55
CFAP54-207ENST00000554821 NDUFA2O43678 99 aa-0.88□□□□□ -2.55
CFAP54-207ENST00000554821 CATR1Q13166 79 aa-0.88□□□□□ -2.55
CFAP54-207ENST00000554821 Q56UQ5 140 aa-0.88□□□□□ -2.55
CFAP54-207ENST00000554821 POLA1P09884 1462 aaPredicted RBP-0.88□□□□□ -2.55
CFAP54-207ENST00000554821 MBD5Q9P267 1494 aa-0.88□□□□□ -2.55
CFAP54-207ENST00000554821 KDM5AP29375 1690 aaKnown RBP-0.88□□□□□ -2.55
CFAP54-207ENST00000554821 TACC2O95359 2948 aa-0.88□□□□□ -2.55
CFAP54-207ENST00000554821 MYH7P12883 1935 aa-0.89□□□□□ -2.55
CFAP54-207ENST00000554821 MRPL54Q6P161 138 aaKnown RBP-0.89□□□□□ -2.55
CFAP54-207ENST00000554821 SPRR4Q96PI1 79 aa-0.89□□□□□ -2.55
CFAP54-207ENST00000554821 GAPVD1Q14C86 1478 aa-0.89□□□□□ -2.55
CFAP54-207ENST00000554821 SHANK2Q9UPX8 1470 aa-0.89□□□□□ -2.55
CFAP54-207ENST00000554821 TULP4Q9NRJ4 1543 aa-0.89□□□□□ -2.55
CFAP54-207ENST00000554821 LINC00959A0A1B0GUT2 108 aa-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 M0R2T5 61 aa-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 IGLC1P0CG04 106 aa-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 BTG2P78543 158 aa-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 C10orf113Q5VZT2 155 aa-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 COMMD6Q7Z4G1 85 aa-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 C5orf38Q86SI9 138 aa-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 TMEM263Q8WUH6 116 aaKnown RBP-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 RAPGEF6Q8TEU7 1601 aa-0.9□□□□□ -2.55
CFAP54-207ENST00000554821 PKHD1L1Q86WI1 4243 aa-0.91□□□□□ -2.55
CFAP54-207ENST00000554821 ARHGEF5Q12774 1597 aa-0.91□□□□□ -2.55
CFAP54-207ENST00000554821 MUC17Q685J3 4493 aa-0.91□□□□□ -2.55
CFAP54-207ENST00000554821 LOC285095A0A1B0GVY8 99 aa-0.91□□□□□ -2.56
CFAP54-207ENST00000554821 CHKB-CPT1BH3BT56 60 aa-0.91□□□□□ -2.56
CFAP54-207ENST00000554821 SPINK4O60575 86 aa-0.91□□□□□ -2.56
CFAP54-207ENST00000554821 DEFB105AQ8NG35 78 aa-0.91□□□□□ -2.56
CFAP54-207ENST00000554821 MYOM1P52179 1685 aa-0.91□□□□□ -2.56
CFAP54-207ENST00000554821 ROBO1Q9Y6N7 1651 aa-0.91□□□□□ -2.56
CFAP54-207ENST00000554821 OOSP1A8MZH6 123 aa-0.92□□□□□ -2.56
CFAP54-207ENST00000554821 APOC2P02655 101 aa-0.92□□□□□ -2.56
CFAP54-207ENST00000554821 MGPP08493 103 aa-0.92□□□□□ -2.56
CFAP54-207ENST00000554821 CCDC58Q4VC31 144 aa-0.92□□□□□ -2.56
CFAP54-207ENST00000554821 MYOZ3Q8TDC0 251 aa-0.92□□□□□ -2.56
CFAP54-207ENST00000554821 CDC42SE2Q9NRR3 84 aa-0.92□□□□□ -2.56
CFAP54-207ENST00000554821 HTTP42858 3142 aa-0.92□□□□□ -2.56
CFAP54-207ENST00000554821 SHROOM2Q13796 1616 aa-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 TRBV7-4A0A0J9YYF1 115 aa-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 SSSCA1O60232 199 aa-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 DEFA5Q01523 94 aa-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 FAM223AQ8IWN6 122 aa-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 C8orf59Q8N0T1 100 aaPredicted RBP-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 NXT2Q9NPJ8 142 aaKnown RBP-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 SPG11Q96JI7 2443 aa-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 SPTBN4Q9H254 2564 aa-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.93□□□□□ -2.56
CFAP54-207ENST00000554821 IQSEC2Q5JU85 1478 aa-0.94□□□□□ -2.56
CFAP54-207ENST00000554821 CELSR3Q9NYQ7 3312 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 AKAP13Q12802 2813 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 WDR87Q6ZQQ6 2873 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 PKD1P98161 4303 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 IFNGP01579 166 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 FGF7P21781 194 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 UBA52P62987 128 aaKnown RBP-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 LCN9Q8WX39 176 aa-0.95□□□□□ -2.56
CFAP54-207ENST00000554821 LINC01600Q96MT4 127 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms