RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
RDH11-207ENST00000554731 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
RDH11-207ENST00000554731 FAM104BQ5XKR9 115 aa7.56□□□□□ -1.2
RDH11-207ENST00000554731 NAT8BQ9UHF3 227 aa7.56□□□□□ -1.2
RDH11-207ENST00000554731 IGLV1-50A0A075B6I6 118 aa7.55□□□□□ -1.2
RDH11-207ENST00000554731 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
RDH11-207ENST00000554731 LINC00862A6NCI5 91 aa7.55□□□□□ -1.2
RDH11-207ENST00000554731 TLX1NBP0CAT3 122 aa7.55□□□□□ -1.2
RDH11-207ENST00000554731 RPL32P62910 135 aaKnown RBP7.55□□□□□ -1.2
RDH11-207ENST00000554731 TMEM241Q24JQ0 296 aa7.55□□□□□ -1.2
RDH11-207ENST00000554731 C10orf25Q5T742 122 aa7.55□□□□□ -1.2
RDH11-207ENST00000554731 FAM19A5Q7Z5A7 132 aaPredicted RBP7.55□□□□□ -1.2
RDH11-207ENST00000554731 SPANXA1Q9NS26 97 aa7.55□□□□□ -1.2
RDH11-207ENST00000554731 TRBV24-1A0A075B6N3 115 aa7.54□□□□□ -1.2
RDH11-207ENST00000554731 SRP19P09132 144 aaKnown RBP7.54□□□□□ -1.2
RDH11-207ENST00000554731 CKS2P33552 79 aa7.54□□□□□ -1.2
RDH11-207ENST00000554731 HBBP68871 147 aa7.54□□□□□ -1.2
RDH11-207ENST00000554731 GAGE2EQ4V326 116 aa7.54□□□□□ -1.2
RDH11-207ENST00000554731 UNQ6190/PRO20217Q6UXQ8 127 aa7.54□□□□□ -1.2
RDH11-207ENST00000554731 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
RDH11-207ENST00000554731 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
RDH11-207ENST00000554731 GAGE2DQ9UEU5 116 aa7.54□□□□□ -1.2
RDH11-207ENST00000554731 IFITM10A6NMD0 228 aa7.53□□□□□ -1.2
RDH11-207ENST00000554731 TNFRSF6BO95407 300 aa7.53□□□□□ -1.2
RDH11-207ENST00000554731 MRPS36P82909 103 aaKnown RBP7.53□□□□□ -1.2
RDH11-207ENST00000554731 FAM74A3Q4VXF1 159 aa7.53□□□□□ -1.2
RDH11-207ENST00000554731 SMIM2Q9BVW6 85 aa7.53□□□□□ -1.2
RDH11-207ENST00000554731 SMDT1Q9H4I9 107 aa7.53□□□□□ -1.2
RDH11-207ENST00000554731 C6orf48Q9UBA6 75 aa7.53□□□□□ -1.2
RDH11-207ENST00000554731 hCG_2014768A0A024R1R8 64 aa7.52□□□□□ -1.21
RDH11-207ENST00000554731 TGIF2-C20orf24A0A0A6YYL0 155 aa7.52□□□□□ -1.21
RDH11-207ENST00000554731 A0A1B0GW15 77 aa7.52□□□□□ -1.21
RDH11-207ENST00000554731 M0QXV9 152 aa7.52□□□□□ -1.21
RDH11-207ENST00000554731 UBE2BP63146 152 aa7.52□□□□□ -1.21
RDH11-207ENST00000554731 SMIM27A0A1W2PRY6 76 aa7.51□□□□□ -1.21
RDH11-207ENST00000554731 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
RDH11-207ENST00000554731 UBE2D1P51668 147 aa7.51□□□□□ -1.21
RDH11-207ENST00000554731 ADIRFQ15847 76 aa7.51□□□□□ -1.21
RDH11-207ENST00000554731 AKAP14Q86UN6 197 aa7.51□□□□□ -1.21
RDH11-207ENST00000554731 D6R8Y8 96 aa7.5□□□□□ -1.21
RDH11-207ENST00000554731 RPL13AP40429 203 aaKnown RBP7.5□□□□□ -1.21
RDH11-207ENST00000554731 RPL23P62829 140 aaKnown RBP7.5□□□□□ -1.21
RDH11-207ENST00000554731 KRTAP7-1Q8IUC3 87 aa7.5□□□□□ -1.21
RDH11-207ENST00000554731 TRBV30A0A0K0K1B3 111 aa7.49□□□□□ -1.21
RDH11-207ENST00000554731 F8W036 122 aa7.49□□□□□ -1.21
RDH11-207ENST00000554731 NPYP01303 97 aa7.49□□□□□ -1.21
RDH11-207ENST00000554731 S100A8P05109 93 aa7.49□□□□□ -1.21
RDH11-207ENST00000554731 KIAA0087Q14695 138 aa7.49□□□□□ -1.21
RDH11-207ENST00000554731 PRR4Q16378 134 aa7.49□□□□□ -1.21
RDH11-207ENST00000554731 NDUFC2-KCTD14E9PQ53 114 aa7.48□□□□□ -1.21
RDH11-207ENST00000554731 PPBPP02775 128 aa7.48□□□□□ -1.21
RDH11-207ENST00000554731 IFI27P40305 119 aaPredicted RBP7.48□□□□□ -1.21
RDH11-207ENST00000554731 MRPL54Q6P161 138 aaKnown RBP7.48□□□□□ -1.21
RDH11-207ENST00000554731 PACRGQ96M98 296 aaPredicted RBP7.48□□□□□ -1.21
RDH11-207ENST00000554731 NAT8Q9UHE5 227 aa7.48□□□□□ -1.21
RDH11-207ENST00000554731 RAB5AP20339 215 aa7.47□□□□□ -1.21
RDH11-207ENST00000554731 LINC00242Q5T6M2 205 aa7.47□□□□□ -1.21
RDH11-207ENST00000554731 C2orf82Q6UX34 121 aa7.47□□□□□ -1.21
RDH11-207ENST00000554731 PYGO1Q9Y3Y4 419 aa7.47□□□□□ -1.21
RDH11-207ENST00000554731 IGLV4-3A0A075B6K6 122 aa7.46□□□□□ -1.22
RDH11-207ENST00000554731 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.22
RDH11-207ENST00000554731 CARHSP1Q9Y2V2 147 aaKnown RBP7.46□□□□□ -1.22
RDH11-207ENST00000554731 A0A1B0GXF2 115 aa7.45□□□□□ -1.22
RDH11-207ENST00000554731 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
RDH11-207ENST00000554731 TMEM141Q96I45 108 aa7.45□□□□□ -1.22
RDH11-207ENST00000554731 C9JQL5 133 aa7.44□□□□□ -1.22
RDH11-207ENST00000554731 ZNF861PO60384 105 aa7.44□□□□□ -1.22
RDH11-207ENST00000554731 TEX43Q6ZNM6 134 aa7.44□□□□□ -1.22
RDH11-207ENST00000554731 LINC01561Q8N1V8 128 aa7.44□□□□□ -1.22
RDH11-207ENST00000554731 PRELID3AQ96N28 172 aa7.44□□□□□ -1.22
RDH11-207ENST00000554731 A0A0U1RQV1 116 aa7.43□□□□□ -1.22
RDH11-207ENST00000554731 PRSS2P07478 247 aa7.43□□□□□ -1.22
RDH11-207ENST00000554731 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
RDH11-207ENST00000554731 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
RDH11-207ENST00000554731 TMEM136Q6ZRR5 245 aa7.43□□□□□ -1.22
RDH11-207ENST00000554731 C2orf88Q9BSF0 95 aa7.43□□□□□ -1.22
RDH11-207ENST00000554731 NUPR1O60356 82 aa7.42□□□□□ -1.22
RDH11-207ENST00000554731 CKS1BP61024 79 aa7.42□□□□□ -1.22
RDH11-207ENST00000554731 PEA15Q15121 130 aa7.42□□□□□ -1.22
RDH11-207ENST00000554731 Q6ZN92 141 aa7.42□□□□□ -1.22
RDH11-207ENST00000554731 LBHQ53QV2 105 aaPredicted RBP7.41□□□□□ -1.22
RDH11-207ENST00000554731 C6orf226Q5I0X4 101 aa7.41□□□□□ -1.22
RDH11-207ENST00000554731 ATP5L2Q7Z4Y8 100 aa7.41□□□□□ -1.22
RDH11-207ENST00000554731 LINC00469Q8N7U9 141 aa7.41□□□□□ -1.22
RDH11-207ENST00000554731 TOMM7Q9P0U1 55 aa7.41□□□□□ -1.22
RDH11-207ENST00000554731 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
RDH11-207ENST00000554731 MUC2Q02817 5179 aa7.41□□□□□ -1.22
RDH11-207ENST00000554731 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
RDH11-207ENST00000554731 TSPAN13O95857 204 aa7.4□□□□□ -1.22
RDH11-207ENST00000554731 SRSF3P84103 164 aaKnown RBP7.4□□□□□ -1.22
RDH11-207ENST00000554731 CTDSP1Q9GZU7 261 aa7.4□□□□□ -1.22
RDH11-207ENST00000554731 VCX2Q9H322 139 aa7.4□□□□□ -1.22
RDH11-207ENST00000554731 MAP1LC3AQ9H492 121 aa7.4□□□□□ -1.22
RDH11-207ENST00000554731 CYSLTR1Q9Y271 337 aa7.4□□□□□ -1.22
RDH11-207ENST00000554731 LAMTOR2Q9Y2Q5 125 aa7.4□□□□□ -1.22
RDH11-207ENST00000554731 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
RDH11-207ENST00000554731 ZC2HC1BQ5TFG8 222 aa7.39□□□□□ -1.23
RDH11-207ENST00000554731 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
RDH11-207ENST00000554731 LINC00173Q6ZV60 143 aa7.39□□□□□ -1.23
RDH11-207ENST00000554731 Q8IZM0 81 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms