RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 HOXD3P31249 432 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-207ENST00000554439 ID1P41134 155 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 SYNJ2BPP57105 145 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 DEFB121Q5J5C9 76 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 SOSTDC1Q6X4U4 206 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 ZNF843Q8N446 348 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 TMEM101Q96IK0 257 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 USMG5Q96IX5 58 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 FAM218AQ96MZ4 157 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 YAE1D1Q9NRH1 226 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 VPREB3Q9UKI3 123 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 C22orf24Q9Y442 160 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 POLQO75417 2590 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 CHD6Q8TD26 2715 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 TRBV7-7A0A0K0K1E9 115 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 C19orf84I3L1E1 186 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 SNRPD3P62318 126 aaKnown RBP1.83□□□□□ -2.12
PRPF39-207ENST00000554439 DAZ2Q13117 558 aaKnown RBP1.83□□□□□ -2.12
PRPF39-207ENST00000554439 C9orf129Q5T035 196 aaKnown RBP1.83□□□□□ -2.12
PRPF39-207ENST00000554439 DAZ4Q86SG3 579 aaKnown RBP1.83□□□□□ -2.12
PRPF39-207ENST00000554439 LINC00308Q8TCZ7 52 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 Q9HAA7 133 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 DAZ3Q9NR90 486 aaKnown RBP1.83□□□□□ -2.12
PRPF39-207ENST00000554439 PYGO1Q9Y3Y4 419 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 FLNCQ14315 2725 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 MYO9AB2RTY4 2548 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 JMJD1CQ15652 2540 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 NF1P21359 2839 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 FAM240AA0A1B0GVK7 77 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 A6NDX4 124 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 K7EQG2 157 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 IGHV4-31P0DP07 118 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 MRPL23Q16540 153 aaKnown RBP1.83□□□□□ -2.12
PRPF39-207ENST00000554439 CYSTM1Q9H1C7 97 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 USP9XQ93008 2570 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-207ENST00000554439 SETD2Q9BYW2 2564 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-207ENST00000554439 IGHV3OR16-12A0A075B7B8 117 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 TRAV13-1A0A0B4J241 112 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 RBMY1BA6NDE4 496 aaKnown RBP1.82□□□□□ -2.12
PRPF39-207ENST00000554439 RBMY1EA6NEQ0 496 aaKnown RBP1.82□□□□□ -2.12
PRPF39-207ENST00000554439 COX7A2LO14548 114 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 NDUFA1O15239 70 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 RBMY1DP0C7P1 496 aaKnown RBP1.82□□□□□ -2.12
PRPF39-207ENST00000554439 BAALC-AS2P0C853 105 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 PSMB8P28062 276 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 DEFB136Q30KP8 78 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 C9orf153Q5TBE3 101 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 C18orf65Q6ZTR6 163 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 TLN2Q9Y4G6 2542 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 IGLV5-37A0A075B6J1 123 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 H3BUA1 57 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 K7EMT4 169 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 IGHV4-59P01825 116 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 DEFB131AP59861 70 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 LINC00242Q5T6M2 205 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 SDIM1Q6ZPB5 146 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 C3orf22Q8N5N4 141 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 SPANXA1Q9NS26 97 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 TEX15Q9BXT5 2789 aa1.82□□□□□ -2.12
PRPF39-207ENST00000554439 IGHV4-30-2A0A087WSY4 118 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 A0A087WYN8 130 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 SMIM1B2RUZ4 78 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 TIMM17BO60830 172 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 IGHV3-53P01767 116 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 HERVK_113P63121 156 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 FHL2Q14192 279 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 PRIMA1Q86XR5 153 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 TMEM126AQ9H061 195 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 PTPN13Q12923 2485 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 CFAP46Q8IYW2 2715 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 IGLV5-45A0A087WSX0 123 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 A0A087WVE0 104 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 IGKV3D-7A0A0C4DH55 119 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 ATP5G1P05496 136 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 CIRBPQ14011 172 aaKnown RBP1.81□□□□□ -2.12
PRPF39-207ENST00000554439 LY6DQ14210 128 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 LINC00643Q86TS7 51 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 MAPK1IP1LQ8NDC0 245 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 C2orf48Q96LS8 159 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 EDA2RQ9HAV5 297 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 EPG5Q9HCE0 2579 aa1.81□□□□□ -2.12
PRPF39-207ENST00000554439 SETXQ7Z333 2677 aaKnown RBP1.81□□□□□ -2.12
PRPF39-207ENST00000554439 IGKV2-28A0A075B6P5 120 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 IGLV9-49A0A0B4J1Y8 123 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 IGKV3OR2-268A0A0C4DH90 116 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 hADV29S1A0JD25 119 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 UQCRQO14949 82 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 IGKV2D-28P01615 120 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 KLRB1Q12918 225 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 DEFB112Q30KQ8 113 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 NTM-AS1Q6ZSK4 140 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 C5orf38Q86SI9 138 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 LINC00337Q8N6G1 96 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 C11orf72Q8NBR9 251 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 KIR2DL5BQ8NHK3 375 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 NRGNQ92686 78 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 IMUPQ9GZP8 106 aa1.8□□□□□ -2.12
PRPF39-207ENST00000554439 C14orf132Q9NPU4 83 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms