RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 UBE2WQ96B02 151 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 CARD19Q96LW7 228 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 LINC00467Q9BRT7 94 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 TIMM21Q9BVV7 248 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 IMUPQ9GZP8 106 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV3OR16-13A0A075B7E8 117 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 TRAV26-1A0A087WT03 109 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV3-49A0A0A0MS15 119 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV3-74A0A0B4J1X5 117 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV1-58A0A0C4DH39 117 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 K7EIL1 84 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 GNRH2O43555 120 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 ATP5G1P05496 136 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
VPS33B-203ENST00000554264 INSL3P51460 131 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 MIAQ16674 131 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 TTC32Q5I0X7 151 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 UNQ9165/PRO28630Q6UXU0 137 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 PRR26Q8N8Z3 221 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 KLHL30-AS1Q8NEE0 82 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 ZNRF2Q8NHG8 242 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 B9D2Q9BPU9 175 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 OVOL2Q9BRP0 275 aa4.29□□□□□ -1.72
VPS33B-203ENST00000554264 IGLV4-3A0A075B6K6 122 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 C3orf84H3BNL1 204 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 H3BUX3 64 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 K7EQG2 157 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 CD28P10747 220 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 TSPEAR-AS2P59090 65 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 WFDC9Q8NEX5 89 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 SPXQ9BT56 116 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 SELENOKQ9Y6D0 94 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 ICOSQ9Y6W8 199 aa4.28□□□□□ -1.72
VPS33B-203ENST00000554264 IGLV5-45A0A087WSX0 123 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 TRAV12-3A0A0B4J271 114 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 A8MTW9 85 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 LST1O00453 97 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 NDUFA1O15239 70 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 GAGE7O76087 117 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 GAGE12FP0CL80 117 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 GAGE12GP0CL81 117 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 GAGE12IP0CL82 117 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 IGHV3-30-3P0DP02 117 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 PRB4P10163 310 aaPredicted RBP4.27□□□□□ -1.73
VPS33B-203ENST00000554264 NDUFV3P56181 108 aaKnown RBP4.27□□□□□ -1.73
VPS33B-203ENST00000554264 RPL39P62891 51 aaKnown RBP4.27□□□□□ -1.73
VPS33B-203ENST00000554264 ZNF415Q09FC8 603 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 GAGE4Q13068 117 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 LY6EQ16553 131 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 FAM74A4Q5TZK3 123 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 C2orf82Q6UX34 121 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 MUSTN1Q8IVN3 82 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 VSIG2Q96IQ7 327 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 CITED2Q99967 270 aaPredicted RBP4.27□□□□□ -1.73
VPS33B-203ENST00000554264 NOTCH3Q9UM47 2321 aa4.27□□□□□ -1.73
VPS33B-203ENST00000554264 MUC4Q99102 2169 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 TENM3Q9P273 2699 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 TRBV7-7A0A0K0K1E9 115 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 J3KRW8 73 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 PSMB8P28062 276 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 HERVK_113P63121 156 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 HERV-K104P63124 156 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 EGFEM1PQ0D2K5 195 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 SFTA2Q6UW10 78 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 FAM19A3Q7Z5A8 133 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 TMEM219Q86XT9 240 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 TMEM61Q8N0U2 210 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 Q8N2B8 174 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 TMEM101Q96IK0 257 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 TMEM126AQ9H061 195 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 ZNF702PQ9H963 129 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 NDUFA12Q9UI09 145 aa4.26□□□□□ -1.73
VPS33B-203ENST00000554264 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
VPS33B-203ENST00000554264 A0A0J9YXV3 536 aa4.25□□□□□ -1.73
VPS33B-203ENST00000554264 F6UB75 175 aa4.25□□□□□ -1.73
VPS33B-203ENST00000554264 TRBV12-3P01733 135 aa4.25□□□□□ -1.73
VPS33B-203ENST00000554264 TRACP01848 142 aa4.25□□□□□ -1.73
VPS33B-203ENST00000554264 INAFM2P0DMQ5 153 aa4.25□□□□□ -1.73
VPS33B-203ENST00000554264 Q6ZQT7 251 aa4.25□□□□□ -1.73
VPS33B-203ENST00000554264 LITAFQ99732 161 aa4.25□□□□□ -1.73
VPS33B-203ENST00000554264 CSDC2Q9Y534 153 aaKnown RBP4.25□□□□□ -1.73
VPS33B-203ENST00000554264 TRBV10-1A0A0K0K1A3 114 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 IGHV3-11P01762 117 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 IGHV3-53P01767 116 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 PRSS2P07478 247 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 CXCL5P42830 114 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 FAM222AQ5U5X8 452 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 DAND5Q8N907 189 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 UBE2E2Q96LR5 201 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 PEMTQ9UBM1 199 aa4.24□□□□□ -1.73
VPS33B-203ENST00000554264 H7C423 109 aa4.23□□□□□ -1.73
VPS33B-203ENST00000554264 COX7A2LO14548 114 aa4.23□□□□□ -1.73
VPS33B-203ENST00000554264 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
VPS33B-203ENST00000554264 EMP1P54849 157 aa4.23□□□□□ -1.73
VPS33B-203ENST00000554264 CMC4P56277 68 aaPredicted RBP4.23□□□□□ -1.73
VPS33B-203ENST00000554264 CASC10Q5T4H9 136 aa4.23□□□□□ -1.73
VPS33B-203ENST00000554264 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
VPS33B-203ENST00000554264 C15orf53Q8NAA6 179 aa4.23□□□□□ -1.73
VPS33B-203ENST00000554264 UBE2D4Q9Y2X8 147 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms