RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
TDP1-207ENST00000553617 SPAG11AQ6PDA7 123 aa2.01□□□□□ -2.09
TDP1-207ENST00000553617 MUSTN1Q8IVN3 82 aa2.01□□□□□ -2.09
TDP1-207ENST00000553617 ORMDL1Q9P0S3 153 aa2.01□□□□□ -2.09
TDP1-207ENST00000553617 MED12Q93074 2177 aa2□□□□□ -2.09
TDP1-207ENST00000553617 CR1P17927 2039 aa2□□□□□ -2.09
TDP1-207ENST00000553617 USP32Q8NFA0 1604 aa2□□□□□ -2.09
TDP1-207ENST00000553617 SSBP1Q04837 148 aaKnown RBP2□□□□□ -2.09
TDP1-207ENST00000553617 DEFB107AQ8IZN7 70 aa2□□□□□ -2.09
TDP1-207ENST00000553617 TOMM5Q8N4H5 51 aa2□□□□□ -2.09
TDP1-207ENST00000553617 C4orf3Q8WVX3 66 aa2□□□□□ -2.09
TDP1-207ENST00000553617 Q9BRP9 147 aa2□□□□□ -2.09
TDP1-207ENST00000553617 PRR15LQ9BU68 103 aa2□□□□□ -2.09
TDP1-207ENST00000553617 UNC13CQ8NB66 2214 aa2□□□□□ -2.09
TDP1-207ENST00000553617 TRPM2O94759 1503 aa2□□□□□ -2.09
TDP1-207ENST00000553617 SLIT2O94813 1529 aa2□□□□□ -2.09
TDP1-207ENST00000553617 TULP4Q9NRJ4 1543 aa2□□□□□ -2.09
TDP1-207ENST00000553617 TET1Q8NFU7 2136 aa2□□□□□ -2.09
TDP1-207ENST00000553617 LOC285556D6RIA3 1793 aa2□□□□□ -2.09
TDP1-207ENST00000553617 CD163L1Q9NR16 1453 aa2□□□□□ -2.09
TDP1-207ENST00000553617 NUP188Q5SRE5 1749 aa2□□□□□ -2.09
TDP1-207ENST00000553617 NOTCH2Q04721 2471 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 ARFGEF3Q5TH69 2177 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 UBR3Q6ZT12 1888 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 ZNF236Q9UL36 1845 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 IGKV3-7A0A075B6H7 116 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 A0A0J9YY99 117 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 IGHV3-30P01768 117 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 CTSGP08311 255 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 IGHV3-30-5P0DP03 117 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 S100A3P33764 101 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 DEFB134Q4QY38 66 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 LINC00304Q8N9R0 145 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 PSORS1C2Q9UIG4 136 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 ANKRD36CQ5JPF3 1778 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 ANKRD36A6QL64 1941 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 PAPPAQ13219 1627 aa1.99□□□□□ -2.09
TDP1-207ENST00000553617 EIF2AK4Q9P2K8 1649 aaKnown RBP1.99□□□□□ -2.09
TDP1-207ENST00000553617 ABCA4P78363 2273 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 DNAJC13O75165 2243 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 TRBV6-5A0A0K0K1A5 114 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 A0A1W2PNN7 141 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 HCRTO43612 131 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 Q6ZTI0 123 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 Q86TA4 180 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 PPP1R1CQ8WVI7 109 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 PRO2289Q9P1D8 64 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 SNURFQ9Y675 71 aa1.98□□□□□ -2.09
TDP1-207ENST00000553617 DDX60Q8IY21 1712 aaKnown RBP1.97□□□□□ -2.09
TDP1-207ENST00000553617 DNAL4O96015 105 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 IGKV1-17P01599 117 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 KRTAP10-8P60410 259 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 GDF5OSQ5U4N7 250 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 NCBP2-AS2Q69YL0 99 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 FDCSPQ8NFU4 85 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 PATE1Q8WXA2 126 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 AMELXQ99217 191 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 NRXN2Q9P2S2 1712 aa1.97□□□□□ -2.09
TDP1-207ENST00000553617 PARP4Q9UKK3 1724 aaKnown RBP1.97□□□□□ -2.09
TDP1-207ENST00000553617 CPS1P31327 1500 aa1.96□□□□□ -2.09
TDP1-207ENST00000553617 NHSQ6T4R5 1651 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 MRC1P22897 1456 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 PHRF1Q9P1Y6 1649 aaKnown RBP1.96□□□□□ -2.1
TDP1-207ENST00000553617 LINC01549A6NIU2 74 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 F8VRH5 84 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 M0R3E3 92 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 PRH1P02810 166 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 CCL3L1P16619 93 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 FAM74A4Q5TZK3 123 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 COX7B2Q8TF08 81 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 R4GMQ9 66 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 SCN7AQ01118 1682 aa1.96□□□□□ -2.1
TDP1-207ENST00000553617 IGKV2-24A0A0C4DH68 120 aa1.95□□□□□ -2.1
TDP1-207ENST00000553617 TRBV7-4A0A0J9YYF1 115 aa1.95□□□□□ -2.1
TDP1-207ENST00000553617 PPYP01298 95 aa1.95□□□□□ -2.1
TDP1-207ENST00000553617 IGLV6-57P01721 117 aa1.95□□□□□ -2.1
TDP1-207ENST00000553617 PDE6GP18545 87 aa1.95□□□□□ -2.1
TDP1-207ENST00000553617 KRTAP10-10P60014 251 aa1.95□□□□□ -2.1
TDP1-207ENST00000553617 TNRC6BQ9UPQ9 1833 aaKnown RBP1.95□□□□□ -2.1
TDP1-207ENST00000553617 LRRC37A3O60309 1634 aa1.95□□□□□ -2.1
TDP1-207ENST00000553617 ALKQ9UM73 1620 aa1.95□□□□□ -2.1
TDP1-207ENST00000553617 FMN2Q9NZ56 1722 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 PCDH15Q96QU1 1955 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 SAMD9LQ8IVG5 1584 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 CEP192Q8TEP8 1941 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 DOCK10Q96BY6 2186 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 A0A087WVE0 104 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 JMJD7-PLA2G4BH0Y9G9 81 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 IGLV3-1P01715 115 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 HMGA1P17096 107 aaKnown RBP1.94□□□□□ -2.1
TDP1-207ENST00000553617 CCL18P55774 89 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 ZNF563Q8TA94 476 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 NMES1Q9C002 83 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 CCL26Q9Y258 94 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 LINC01558Q9Y6Z2 57 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 C4AP0C0L4 1744 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 C4BP0C0L5 1744 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 TIAM2Q8IVF5 1701 aa1.94□□□□□ -2.1
TDP1-207ENST00000553617 SDK1Q7Z5N4 2213 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms