RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 A0A087WTM6 91 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 A0A1B0GW15 77 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 PPP1R17O96001 155 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 LINC00694P0DN24 101 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 ADCYAP1P18509 176 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 S100PP25815 95 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 RPS10P46783 165 aaKnown RBP3.09□□□□□ -1.91
ATXN3-222ENST00000553570 RBX1P62877 108 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 HBBP68871 147 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 FAM104BQ5XKR9 115 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 RNF185Q96GF1 192 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 CNFNQ9BYD5 112 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 TMEM242Q9NWH2 141 aa3.09□□□□□ -1.91
ATXN3-222ENST00000553570 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
ATXN3-222ENST00000553570 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 D6R8Y8 96 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 RAB5AP20339 215 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 REG3AQ06141 175 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 RHEBQ15382 184 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 IQCJQ1A5X6 159 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 C10orf91Q5T1B1 145 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 FRZBQ92765 325 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 KIR2DL4Q99706 377 aa3.08□□□□□ -1.92
ATXN3-222ENST00000553570 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
ATXN3-222ENST00000553570 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
ATXN3-222ENST00000553570 C7orf77A4D0Y5 90 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 TCAPO15273 167 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 FGF6P10767 208 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 LAGE3Q14657 143 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 SS18Q15532 418 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 MIAQ16674 131 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 LINC01620Q4KN68 170 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 HIGD2BQ4VC39 106 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
ATXN3-222ENST00000553570 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-222ENST00000553570 ORMDL3Q8N138 153 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 TMEM70Q9BUB7 260 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 CHCHD7Q9BUK0 85 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 HYDINQ4G0P3 5121 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 RYR3Q15413 4870 aa3.07□□□□□ -1.92
ATXN3-222ENST00000553570 TRBV6-5A0A0K0K1A5 114 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 SCO1O75880 301 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 NPYP01303 97 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 PPBPP02775 128 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 POLR2KP53803 58 aaKnown RBP3.06□□□□□ -1.92
ATXN3-222ENST00000553570 DSCR10P59022 87 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 SMAGPQ0VAQ4 97 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 FABP9Q0Z7S8 132 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 ATP5L2Q7Z4Y8 100 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 Q8N814 137 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 C20orf203Q8NBC4 194 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 IMMP2LQ96T52 175 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 C20orf78Q9BR46 151 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 SMCO4Q9NRQ5 59 aa3.06□□□□□ -1.92
ATXN3-222ENST00000553570 TRAV13-1A0A0B4J241 112 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 TRAV8-4A0A0B4J246 113 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 A0A1B0GXF2 115 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 XCL1P47992 114 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
ATXN3-222ENST00000553570 HAMPP81172 84 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 WFDC2Q14508 124 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 ZNF664Q8N3J9 261 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 CHCHD10Q8WYQ3 142 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-222ENST00000553570 TRAPPC1Q9Y5R8 145 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 VPS13DQ5THJ4 4388 aa3.05□□□□□ -1.92
ATXN3-222ENST00000553570 TRBV24-1A0A075B6N3 115 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 TGIF2-C20orf24A0A0A6YYL0 155 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 LINC00959A0A1B0GUT2 108 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 CCL25O15444 150 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 SMR3BP02814 79 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-222ENST00000553570 ESDP10768 282 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 ZNF25P17030 456 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-222ENST00000553570 IFI27P40305 119 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-222ENST00000553570 KRTAP10-1P60331 282 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 Q1RN00 199 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 CBLN2Q8IUK8 224 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 Q8N8P6 123 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 TYMSOSQ8TAI1 123 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 DNAH1Q9P2D7 4330 aa3.04□□□□□ -1.92
ATXN3-222ENST00000553570 TRAV9-1A0A075B6T8 112 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 PHOX2AO14813 284 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 NDUFA6P56556 154 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 COX19Q49B96 90 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 FA2HQ7L5A8 372 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 C5orf38Q86SI9 138 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 LINC00526Q96FQ7 95 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 GNB1LQ9BYB4 327 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms