RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TIMM17AQ99595 171 aa14.72□□□□□ -0.05
TDP1-206ENST00000553569 NPSP0C0P6 89 aa14.71□□□□□ -0.05
TDP1-206ENST00000553569 AMELXQ99217 191 aa14.71□□□□□ -0.05
TDP1-206ENST00000553569 IGHV3-64A0A075B6Q5 118 aa14.7□□□□□ -0.06
TDP1-206ENST00000553569 ZNF561-AS1K7EIQ3 104 aa14.7□□□□□ -0.06
TDP1-206ENST00000553569 UBE2D1P51668 147 aa14.7□□□□□ -0.06
TDP1-206ENST00000553569 Q8N1X5 172 aa14.7□□□□□ -0.06
TDP1-206ENST00000553569 IGHV3OR16-9A0A0B4J2B5 98 aa14.69□□□□□ -0.06
TDP1-206ENST00000553569 APOMO95445 188 aa14.69□□□□□ -0.06
TDP1-206ENST00000553569 SMR3BP02814 79 aaPredicted RBP14.69□□□□□ -0.06
TDP1-206ENST00000553569 PAPPA-AS1Q5QFB9 102 aa14.69□□□□□ -0.06
TDP1-206ENST00000553569 LINC00242Q5T6M2 205 aa14.69□□□□□ -0.06
TDP1-206ENST00000553569 ERASQ7Z444 233 aa14.69□□□□□ -0.06
TDP1-206ENST00000553569 URB1-AS1Q96HZ7 61 aa14.69□□□□□ -0.06
TDP1-206ENST00000553569 SCXQ7RTU7 201 aa14.68□□□□□ -0.06
TDP1-206ENST00000553569 DNAH8Q96JB1 4490 aa14.68□□□□□ -0.06
TDP1-206ENST00000553569 LINC00614P0C842 121 aa14.67□□□□□ -0.06
TDP1-206ENST00000553569 COX6A2Q02221 97 aa14.67□□□□□ -0.06
TDP1-206ENST00000553569 SDIM1Q6ZPB5 146 aa14.67□□□□□ -0.06
TDP1-206ENST00000553569 KRTAP4-5Q9BYR2 181 aa14.67□□□□□ -0.06
TDP1-206ENST00000553569 IGLV4-69A0A075B6H9 119 aa14.66□□□□□ -0.06
TDP1-206ENST00000553569 LINC01549A6NIU2 74 aa14.66□□□□□ -0.06
TDP1-206ENST00000553569 SPAG11BQ08648 103 aa14.66□□□□□ -0.06
TDP1-206ENST00000553569 ORAOV1Q8WV07 137 aa14.66□□□□□ -0.06
TDP1-206ENST00000553569 CARD19Q96LW7 228 aa14.66□□□□□ -0.06
TDP1-206ENST00000553569 CHAC1Q9BUX1 264 aa14.66□□□□□ -0.06
TDP1-206ENST00000553569 PMCHL1Q16048 86 aa14.65□□□□□ -0.06
TDP1-206ENST00000553569 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.65□□□□□ -0.06
TDP1-206ENST00000553569 RAB5BP61020 215 aa14.64□□□□□ -0.07
TDP1-206ENST00000553569 SYCNQ0VAF6 134 aa14.64□□□□□ -0.07
TDP1-206ENST00000553569 A0A096LNJ9 63 aa14.63□□□□□ -0.07
TDP1-206ENST00000553569 PANO1I0J062 215 aa14.63□□□□□ -0.07
TDP1-206ENST00000553569 TRGC2P03986 189 aa14.63□□□□□ -0.07
TDP1-206ENST00000553569 OR10D4PQ8NGN7 298 aa14.63□□□□□ -0.07
TDP1-206ENST00000553569 A0A087WZ39 114 aa14.62□□□□□ -0.07
TDP1-206ENST00000553569 SCO1O75880 301 aa14.62□□□□□ -0.07
TDP1-206ENST00000553569 HBDP02042 147 aa14.62□□□□□ -0.07
TDP1-206ENST00000553569 CIRBP-AS1Q8TBR5 109 aa14.62□□□□□ -0.07
TDP1-206ENST00000553569 CAMK2N2Q96S95 79 aa14.62□□□□□ -0.07
TDP1-206ENST00000553569 EPM2AB3EWF7 344 aa14.61□□□□□ -0.07
TDP1-206ENST00000553569 CHTF8P0CG12 524 aa14.61□□□□□ -0.07
TDP1-206ENST00000553569 Q5VSD8 79 aa14.61□□□□□ -0.07
TDP1-206ENST00000553569 COLCA2A8K830 154 aa14.6□□□□□ -0.07
TDP1-206ENST00000553569 Q6ZRU5 148 aa14.6□□□□□ -0.07
TDP1-206ENST00000553569 A0A0J9YXV3 536 aa14.59□□□□□ -0.07
TDP1-206ENST00000553569 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.59□□□□□ -0.07
TDP1-206ENST00000553569 FAM19A3Q7Z5A8 133 aa14.59□□□□□ -0.07
TDP1-206ENST00000553569 C2orf48Q96LS8 159 aa14.59□□□□□ -0.07
TDP1-206ENST00000553569 GEMIN7Q9H840 131 aaKnown RBP14.59□□□□□ -0.07
TDP1-206ENST00000553569 HERVK_113P63121 156 aa14.58□□□□□ -0.08
TDP1-206ENST00000553569 SEC11AP67812 179 aa14.58□□□□□ -0.08
TDP1-206ENST00000553569 CST9LQ9H4G1 147 aa14.58□□□□□ -0.08
TDP1-206ENST00000553569 IGKV2-24A0A0C4DH68 120 aa14.57□□□□□ -0.08
TDP1-206ENST00000553569 PMVKQ15126 192 aa14.57□□□□□ -0.08
TDP1-206ENST00000553569 LINC00528Q8N1L1 170 aa14.57□□□□□ -0.08
TDP1-206ENST00000553569 NDUFA6P56556 154 aa14.56□□□□□ -0.08
TDP1-206ENST00000553569 BAGE3Q86Y29 109 aa14.56□□□□□ -0.08
TDP1-206ENST00000553569 CHCHD1Q96BP2 118 aaKnown RBP14.56□□□□□ -0.08
TDP1-206ENST00000553569 DPH3Q96FX2 82 aa14.56□□□□□ -0.08
TDP1-206ENST00000553569 FAM229AH3BQW9 127 aa14.55□□□□□ -0.08
TDP1-206ENST00000553569 CIRBPQ14011 172 aaKnown RBP14.55□□□□□ -0.08
TDP1-206ENST00000553569 PDZD11Q5EBL8 140 aa14.55□□□□□ -0.08
TDP1-206ENST00000553569 LINC01561Q8N1V8 128 aa14.55□□□□□ -0.08
TDP1-206ENST00000553569 SPACA4Q8TDM5 124 aa14.55□□□□□ -0.08
TDP1-206ENST00000553569 CDKN2A-AS1Q9UH64 79 aa14.55□□□□□ -0.08
TDP1-206ENST00000553569 A0A096LNI7 61 aa14.54□□□□□ -0.08
TDP1-206ENST00000553569 LINC00469Q8N7U9 141 aa14.54□□□□□ -0.08
TDP1-206ENST00000553569 PKIGQ9Y2B9 76 aa14.54□□□□□ -0.08
TDP1-206ENST00000553569 TINCRA0A1B0GVN0 87 aa14.53□□□□□ -0.08
TDP1-206ENST00000553569 NDUFA1O15239 70 aa14.53□□□□□ -0.08
TDP1-206ENST00000553569 MAJINQ3KP22 176 aa14.53□□□□□ -0.08
TDP1-206ENST00000553569 PACRGQ96M98 296 aaPredicted RBP14.53□□□□□ -0.08
TDP1-206ENST00000553569 ATP5LO75964 103 aa14.52□□□□□ -0.09
TDP1-206ENST00000553569 KIAA0087Q14695 138 aa14.52□□□□□ -0.09
TDP1-206ENST00000553569 TOMM7Q9P0U1 55 aa14.52□□□□□ -0.09
TDP1-206ENST00000553569 A0A087WYN8 130 aa14.51□□□□□ -0.09
TDP1-206ENST00000553569 LOC107984640A0A0U1RRK4 108 aa14.51□□□□□ -0.09
TDP1-206ENST00000553569 HSBP1O75506 76 aa14.51□□□□□ -0.09
TDP1-206ENST00000553569 FAT1Q14517 4588 aa14.5□□□□□ -0.09
TDP1-206ENST00000553569 F8WDY8 70 aa14.5□□□□□ -0.09
TDP1-206ENST00000553569 C10orf25Q5T742 122 aa14.5□□□□□ -0.09
TDP1-206ENST00000553569 UNQ6190/PRO20217Q6UXQ8 127 aa14.5□□□□□ -0.09
TDP1-206ENST00000553569 PRSS2P07478 247 aa14.49□□□□□ -0.09
TDP1-206ENST00000553569 GAGE2BQ13066 116 aa14.49□□□□□ -0.09
TDP1-206ENST00000553569 MRPL35Q9NZE8 188 aaKnown RBP14.49□□□□□ -0.09
TDP1-206ENST00000553569 RPL18AQ02543 176 aaKnown RBP14.48□□□□□ -0.09
TDP1-206ENST00000553569 C2orf82Q6UX34 121 aa14.48□□□□□ -0.09
TDP1-206ENST00000553569 FAM19A2Q8N3H0 131 aa14.48□□□□□ -0.09
TDP1-206ENST00000553569 IGLV5-45A0A087WSX0 123 aa14.47□□□□□ -0.09
TDP1-206ENST00000553569 SERF1AO75920 110 aa14.47□□□□□ -0.09
TDP1-206ENST00000553569 RNF151Q2KHN1 245 aa14.47□□□□□ -0.09
TDP1-206ENST00000553569 C6orf48Q9UBA6 75 aa14.47□□□□□ -0.09
TDP1-206ENST00000553569 IGLC3P0DOY3 106 aa14.46□□□□□ -0.09
TDP1-206ENST00000553569 PTTG1IPP53801 180 aa14.46□□□□□ -0.09
TDP1-206ENST00000553569 LINC00310P59036 64 aa14.46□□□□□ -0.09
TDP1-206ENST00000553569 STPG4Q8N801 248 aa14.46□□□□□ -0.09
TDP1-206ENST00000553569 LINC00474Q9P2X8 69 aa14.46□□□□□ -0.09
TDP1-206ENST00000553569 ABCA13Q86UQ4 5058 aa14.45□□□□□ -0.1
TDP1-206ENST00000553569 SMIM1B2RUZ4 78 aa14.45□□□□□ -0.1
TDP1-206ENST00000553569 PLA2G1BP04054 148 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms