RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 IGHV3OR16-9A0A0B4J2B5 98 aa11.87□□□□□ -0.51
CPSF2-202ENST00000553427 MALP21145 153 aa11.87□□□□□ -0.51
CPSF2-202ENST00000553427 Q6ZN92 141 aa11.87□□□□□ -0.51
CPSF2-202ENST00000553427 TEX43Q6ZNM6 134 aa11.87□□□□□ -0.51
CPSF2-202ENST00000553427 SCXQ7RTU7 201 aa11.87□□□□□ -0.51
CPSF2-202ENST00000553427 SLC7A5P1Q8MH63 180 aa11.87□□□□□ -0.51
CPSF2-202ENST00000553427 AMELXQ99217 191 aa11.87□□□□□ -0.51
CPSF2-202ENST00000553427 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
CPSF2-202ENST00000553427 PAPPA-AS1Q5QFB9 102 aa11.86□□□□□ -0.51
CPSF2-202ENST00000553427 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
CPSF2-202ENST00000553427 EPM2AB3EWF7 344 aa11.85□□□□□ -0.51
CPSF2-202ENST00000553427 CIRBPQ14011 172 aaKnown RBP11.85□□□□□ -0.51
CPSF2-202ENST00000553427 LINC00173Q6ZV60 143 aa11.85□□□□□ -0.51
CPSF2-202ENST00000553427 SMCO4Q9NRQ5 59 aa11.85□□□□□ -0.51
CPSF2-202ENST00000553427 ZNF561-AS1K7EIQ3 104 aa11.84□□□□□ -0.51
CPSF2-202ENST00000553427 APOMO95445 188 aa11.84□□□□□ -0.51
CPSF2-202ENST00000553427 UBE2D1P51668 147 aa11.84□□□□□ -0.51
CPSF2-202ENST00000553427 FA2HQ7L5A8 372 aa11.84□□□□□ -0.51
CPSF2-202ENST00000553427 C5orf38Q86SI9 138 aa11.84□□□□□ -0.51
CPSF2-202ENST00000553427 VCX2Q9H322 139 aa11.84□□□□□ -0.51
CPSF2-202ENST00000553427 LINC00242Q5T6M2 205 aa11.83□□□□□ -0.52
CPSF2-202ENST00000553427 Q5VSD8 79 aa11.83□□□□□ -0.52
CPSF2-202ENST00000553427 ERASQ7Z444 233 aa11.83□□□□□ -0.52
CPSF2-202ENST00000553427 OR10D4PQ8NGN7 298 aa11.83□□□□□ -0.52
CPSF2-202ENST00000553427 CIRBP-AS1Q8TBR5 109 aa11.83□□□□□ -0.52
CPSF2-202ENST00000553427 C18orf32Q8TCD1 76 aa11.83□□□□□ -0.52
CPSF2-202ENST00000553427 PKIGQ9Y2B9 76 aa11.83□□□□□ -0.52
CPSF2-202ENST00000553427 SMR3BP02814 79 aaPredicted RBP11.82□□□□□ -0.52
CPSF2-202ENST00000553427 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
CPSF2-202ENST00000553427 CBLN2Q8IUK8 224 aa11.82□□□□□ -0.52
CPSF2-202ENST00000553427 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
CPSF2-202ENST00000553427 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
CPSF2-202ENST00000553427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.82□□□□□ -0.52
CPSF2-202ENST00000553427 A0A087WZ39 114 aa11.81□□□□□ -0.52
CPSF2-202ENST00000553427 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
CPSF2-202ENST00000553427 LINC01561Q8N1V8 128 aa11.81□□□□□ -0.52
CPSF2-202ENST00000553427 IGLV4-69A0A075B6H9 119 aa11.8□□□□□ -0.52
CPSF2-202ENST00000553427 SYCNQ0VAF6 134 aa11.8□□□□□ -0.52
CPSF2-202ENST00000553427 LINC00526Q96FQ7 95 aa11.8□□□□□ -0.52
CPSF2-202ENST00000553427 SCGB3A1Q96QR1 104 aa11.8□□□□□ -0.52
CPSF2-202ENST00000553427 F8WDY8 70 aa11.79□□□□□ -0.52
CPSF2-202ENST00000553427 PANO1I0J062 215 aa11.79□□□□□ -0.52
CPSF2-202ENST00000553427 SPAG11BQ08648 103 aa11.79□□□□□ -0.52
CPSF2-202ENST00000553427 SPACA4Q8TDM5 124 aa11.79□□□□□ -0.52
CPSF2-202ENST00000553427 SRRM2Q9UQ35 2752 aaKnown RBP11.79□□□□□ -0.52
CPSF2-202ENST00000553427 SEC11AP67812 179 aa11.78□□□□□ -0.52
CPSF2-202ENST00000553427 COX6A2Q02221 97 aa11.78□□□□□ -0.52
CPSF2-202ENST00000553427 ZC2HC1BQ5TFG8 222 aa11.78□□□□□ -0.52
CPSF2-202ENST00000553427 LINC00528Q8N1L1 170 aa11.78□□□□□ -0.52
CPSF2-202ENST00000553427 URB1-AS1Q96HZ7 61 aa11.78□□□□□ -0.52
CPSF2-202ENST00000553427 LINC00614P0C842 121 aa11.77□□□□□ -0.53
CPSF2-202ENST00000553427 RAB5BP61020 215 aa11.77□□□□□ -0.53
CPSF2-202ENST00000553427 ORAOV1Q8WV07 137 aa11.77□□□□□ -0.53
CPSF2-202ENST00000553427 Q6ZRU5 148 aa11.76□□□□□ -0.53
CPSF2-202ENST00000553427 CAMK2N2Q96S95 79 aa11.76□□□□□ -0.53
CPSF2-202ENST00000553427 A0A096LNJ9 63 aa11.75□□□□□ -0.53
CPSF2-202ENST00000553427 HERVK_113P63121 156 aa11.75□□□□□ -0.53
CPSF2-202ENST00000553427 RNF151Q2KHN1 245 aa11.75□□□□□ -0.53
CPSF2-202ENST00000553427 LINC00474Q9P2X8 69 aa11.75□□□□□ -0.53
CPSF2-202ENST00000553427 HBDP02042 147 aa11.74□□□□□ -0.53
CPSF2-202ENST00000553427 CHTF8P0CG12 524 aa11.74□□□□□ -0.53
CPSF2-202ENST00000553427 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
CPSF2-202ENST00000553427 MRPL35Q9NZE8 188 aaKnown RBP11.73□□□□□ -0.53
CPSF2-202ENST00000553427 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
CPSF2-202ENST00000553427 A0A096LNI7 61 aa11.72□□□□□ -0.53
CPSF2-202ENST00000553427 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.72□□□□□ -0.53
CPSF2-202ENST00000553427 KIAA0087Q14695 138 aa11.72□□□□□ -0.53
CPSF2-202ENST00000553427 PMVKQ15126 192 aa11.72□□□□□ -0.53
CPSF2-202ENST00000553427 CST9LQ9H4G1 147 aa11.72□□□□□ -0.53
CPSF2-202ENST00000553427 A0A087WYN8 130 aa11.71□□□□□ -0.53
CPSF2-202ENST00000553427 LOC107984640A0A0U1RRK4 108 aa11.71□□□□□ -0.53
CPSF2-202ENST00000553427 TINCRA0A1B0GVN0 87 aa11.71□□□□□ -0.53
CPSF2-202ENST00000553427 NDUFA1O15239 70 aa11.71□□□□□ -0.53
CPSF2-202ENST00000553427 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.53
CPSF2-202ENST00000553427 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.53
CPSF2-202ENST00000553427 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.53
CPSF2-202ENST00000553427 IGLV5-45A0A087WSX0 123 aa11.7□□□□□ -0.54
CPSF2-202ENST00000553427 IGKV2-24A0A0C4DH68 120 aa11.7□□□□□ -0.54
CPSF2-202ENST00000553427 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
CPSF2-202ENST00000553427 CDKN2A-AS1Q9UH64 79 aa11.7□□□□□ -0.54
CPSF2-202ENST00000553427 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
CPSF2-202ENST00000553427 COLCA2A8K830 154 aa11.68□□□□□ -0.54
CPSF2-202ENST00000553427 ATP5LO75964 103 aa11.68□□□□□ -0.54
CPSF2-202ENST00000553427 TRGC2P03986 189 aa11.68□□□□□ -0.54
CPSF2-202ENST00000553427 INAFM2P0DMQ5 153 aa11.68□□□□□ -0.54
CPSF2-202ENST00000553427 PTTG1IPP53801 180 aa11.68□□□□□ -0.54
CPSF2-202ENST00000553427 KRTAP10-4P60372 401 aaPredicted RBP11.68□□□□□ -0.54
CPSF2-202ENST00000553427 PMCHL1Q16048 86 aa11.67□□□□□ -0.54
CPSF2-202ENST00000553427 Q8IZM0 81 aa11.67□□□□□ -0.54
CPSF2-202ENST00000553427 DPH3Q96FX2 82 aa11.67□□□□□ -0.54
CPSF2-202ENST00000553427 MYCBP2O75592 4640 aa11.66□□□□□ -0.54
CPSF2-202ENST00000553427 TLX1NBP0CAT3 122 aa11.66□□□□□ -0.54
CPSF2-202ENST00000553427 C10orf25Q5T742 122 aa11.66□□□□□ -0.54
CPSF2-202ENST00000553427 UNQ6190/PRO20217Q6UXQ8 127 aa11.66□□□□□ -0.54
CPSF2-202ENST00000553427 LINC00469Q8N7U9 141 aa11.66□□□□□ -0.54
CPSF2-202ENST00000553427 PACRGQ96M98 296 aaPredicted RBP11.66□□□□□ -0.54
CPSF2-202ENST00000553427 PKHD1L1Q86WI1 4243 aa11.66□□□□□ -0.54
CPSF2-202ENST00000553427 TRBV30A0A0K0K1B3 111 aa11.65□□□□□ -0.54
CPSF2-202ENST00000553427 STPG4Q8N801 248 aa11.65□□□□□ -0.54
CPSF2-202ENST00000553427 C6orf48Q9UBA6 75 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms