RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 HSBP1O75506 76 aa9.73□□□□□ -0.85
MTHFD1-204ENST00000553405 Q8N814 137 aa9.73□□□□□ -0.85
MTHFD1-204ENST00000553405 VCX2Q9H322 139 aa9.73□□□□□ -0.85
MTHFD1-204ENST00000553405 COX6A2Q02221 97 aa9.72□□□□□ -0.85
MTHFD1-204ENST00000553405 CST9LQ9H4G1 147 aa9.72□□□□□ -0.85
MTHFD1-204ENST00000553405 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.71□□□□□ -0.86
MTHFD1-204ENST00000553405 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
MTHFD1-204ENST00000553405 Q6ZN92 141 aa9.71□□□□□ -0.86
MTHFD1-204ENST00000553405 NTN5Q8WTR8 489 aaPredicted RBP9.71□□□□□ -0.86
MTHFD1-204ENST00000553405 ATP5LO75964 103 aa9.7□□□□□ -0.86
MTHFD1-204ENST00000553405 PRSS1P07477 247 aa9.7□□□□□ -0.86
MTHFD1-204ENST00000553405 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
MTHFD1-204ENST00000553405 PMVKQ15126 192 aa9.7□□□□□ -0.86
MTHFD1-204ENST00000553405 KIAA1109Q2LD37 5005 aa9.7□□□□□ -0.86
MTHFD1-204ENST00000553405 SPATA12Q7Z6I5 190 aa9.69□□□□□ -0.86
MTHFD1-204ENST00000553405 C2orf88Q9BSF0 95 aa9.69□□□□□ -0.86
MTHFD1-204ENST00000553405 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
MTHFD1-204ENST00000553405 GVQW2A0A096LPI5 108 aaPredicted RBP9.68□□□□□ -0.86
MTHFD1-204ENST00000553405 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
MTHFD1-204ENST00000553405 SLPIP03973 132 aa9.68□□□□□ -0.86
MTHFD1-204ENST00000553405 IFI27L1Q96BM0 104 aa9.68□□□□□ -0.86
MTHFD1-204ENST00000553405 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
MTHFD1-204ENST00000553405 A0A087WZ39 114 aa9.67□□□□□ -0.86
MTHFD1-204ENST00000553405 COX7A2LO14548 114 aa9.67□□□□□ -0.86
MTHFD1-204ENST00000553405 C5orf38Q86SI9 138 aa9.67□□□□□ -0.86
MTHFD1-204ENST00000553405 HSPG2P98160 4391 aa9.67□□□□□ -0.86
MTHFD1-204ENST00000553405 LEPROTL1O95214 131 aa9.66□□□□□ -0.86
MTHFD1-204ENST00000553405 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
MTHFD1-204ENST00000553405 NDUFA6P56556 154 aa9.66□□□□□ -0.86
MTHFD1-204ENST00000553405 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
MTHFD1-204ENST00000553405 IGHV1-58A0A0C4DH39 117 aa9.65□□□□□ -0.86
MTHFD1-204ENST00000553405 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
MTHFD1-204ENST00000553405 EREGO14944 169 aa9.65□□□□□ -0.86
MTHFD1-204ENST00000553405 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
MTHFD1-204ENST00000553405 PGPEP1Q9NXJ5 209 aa9.65□□□□□ -0.86
MTHFD1-204ENST00000553405 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
MTHFD1-204ENST00000553405 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
MTHFD1-204ENST00000553405 CNBPP62633 177 aaKnown RBP9.64□□□□□ -0.87
MTHFD1-204ENST00000553405 HERVK_113P63121 156 aa9.64□□□□□ -0.87
MTHFD1-204ENST00000553405 C14orf177Q52M58 125 aa9.64□□□□□ -0.87
MTHFD1-204ENST00000553405 LINC01561Q8N1V8 128 aa9.64□□□□□ -0.87
MTHFD1-204ENST00000553405 PACRGQ96M98 296 aaPredicted RBP9.64□□□□□ -0.87
MTHFD1-204ENST00000553405 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.63□□□□□ -0.87
MTHFD1-204ENST00000553405 KIAA0087Q14695 138 aa9.63□□□□□ -0.87
MTHFD1-204ENST00000553405 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
MTHFD1-204ENST00000553405 CFAP161Q6P656 301 aa9.63□□□□□ -0.87
MTHFD1-204ENST00000553405 HERC2O95714 4834 aa9.63□□□□□ -0.87
MTHFD1-204ENST00000553405 hDV102S1A0JD36 115 aa9.62□□□□□ -0.87
MTHFD1-204ENST00000553405 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
MTHFD1-204ENST00000553405 FABP4P15090 132 aa9.62□□□□□ -0.87
MTHFD1-204ENST00000553405 SEC11AP67812 179 aa9.62□□□□□ -0.87
MTHFD1-204ENST00000553405 ODF1Q14990 250 aa9.62□□□□□ -0.87
MTHFD1-204ENST00000553405 LINC00526Q96FQ7 95 aa9.62□□□□□ -0.87
MTHFD1-204ENST00000553405 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
MTHFD1-204ENST00000553405 MRPL35Q9NZE8 188 aaKnown RBP9.61□□□□□ -0.87
MTHFD1-204ENST00000553405 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 ZNF22P17026 224 aaPredicted RBP9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 MALP21145 153 aa9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 HIST3H2BBQ8N257 126 aa9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 OR10D4PQ8NGN7 298 aa9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 CHAC1Q9BUX1 264 aa9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 GEMIN7Q9H840 131 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
MTHFD1-204ENST00000553405 F8VRH5 84 aa9.59□□□□□ -0.87
MTHFD1-204ENST00000553405 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
MTHFD1-204ENST00000553405 LINC00469Q8N7U9 141 aa9.59□□□□□ -0.87
MTHFD1-204ENST00000553405 C9orf163Q8N9P6 203 aa9.59□□□□□ -0.87
MTHFD1-204ENST00000553405 ORAOV1Q8WV07 137 aa9.59□□□□□ -0.87
MTHFD1-204ENST00000553405 FAT1Q14517 4588 aa9.59□□□□□ -0.87
MTHFD1-204ENST00000553405 IGLV5-39A0A0G2JS06 123 aa9.58□□□□□ -0.88
MTHFD1-204ENST00000553405 C16orf90A8MZG2 172 aa9.58□□□□□ -0.88
MTHFD1-204ENST00000553405 APOMO95445 188 aa9.58□□□□□ -0.88
MTHFD1-204ENST00000553405 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
MTHFD1-204ENST00000553405 SPAG11BQ08648 103 aa9.57□□□□□ -0.88
MTHFD1-204ENST00000553405 C5orf52A6NGY3 159 aa9.56□□□□□ -0.88
MTHFD1-204ENST00000553405 SYS1-DBNDD2H3BUS1 97 aa9.56□□□□□ -0.88
MTHFD1-204ENST00000553405 GCSHP23434 173 aa9.56□□□□□ -0.88
MTHFD1-204ENST00000553405 HIST1H2BLQ99880 126 aa9.56□□□□□ -0.88
MTHFD1-204ENST00000553405 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
MTHFD1-204ENST00000553405 SPINK8P0C7L1 97 aa9.55□□□□□ -0.88
MTHFD1-204ENST00000553405 C3orf79P0CE67 100 aa9.55□□□□□ -0.88
MTHFD1-204ENST00000553405 C10orf25Q5T742 122 aa9.55□□□□□ -0.88
MTHFD1-204ENST00000553405 LINC01545Q5VT33 79 aa9.55□□□□□ -0.88
MTHFD1-204ENST00000553405 Q6ZRU5 148 aa9.55□□□□□ -0.88
MTHFD1-204ENST00000553405 Q6ZSA8 131 aa9.55□□□□□ -0.88
MTHFD1-204ENST00000553405 MAP1LC3CQ9BXW4 147 aa9.55□□□□□ -0.88
MTHFD1-204ENST00000553405 H0Y8G0 127 aa9.54□□□□□ -0.88
MTHFD1-204ENST00000553405 SNRPEP62304 92 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-204ENST00000553405 SDIM1Q6ZPB5 146 aa9.54□□□□□ -0.88
MTHFD1-204ENST00000553405 Q8IZM0 81 aa9.54□□□□□ -0.88
MTHFD1-204ENST00000553405 PMCHL2Q9BQD1 86 aa9.54□□□□□ -0.88
MTHFD1-204ENST00000553405 TMEM223A0PJW6 202 aa9.53□□□□□ -0.88
MTHFD1-204ENST00000553405 F8WDY8 70 aa9.53□□□□□ -0.88
MTHFD1-204ENST00000553405 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
MTHFD1-204ENST00000553405 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
MTHFD1-204ENST00000553405 FAM30AQ9NZY2 134 aa9.53□□□□□ -0.88
MTHFD1-204ENST00000553405 H3BRM9 83 aa9.52□□□□□ -0.89
MTHFD1-204ENST00000553405 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms