RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 IGLV5-52A0A0A0MRZ9 124 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 IGHV7-81A0A0B4J1V7 117 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 H3BRN7 92 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 ATP6V0E1O15342 81 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 IGLV2-23P01705 113 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 MT-ATP8P03928 68 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 ACYP1P07311 99 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 ORM2P19652 201 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 HLA-DMBP28068 263 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 NDUFV3P56181 108 aaKnown RBP2.35□□□□□ -2.03
FOXN3-203ENST00000553353 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 GNG5P63218 68 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 ZNF415Q09FC8 603 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 DEFB114Q30KQ6 69 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 GOLT1AQ6ZVE7 132 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 FAM19A5Q7Z5A7 132 aaPredicted RBP2.35□□□□□ -2.03
FOXN3-203ENST00000553353 FAM19A1Q7Z5A9 133 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 PRNTQ86SH4 94 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 NFE4Q86UQ8 179 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 UFC1Q9Y3C8 167 aa2.35□□□□□ -2.03
FOXN3-203ENST00000553353 F11RQ9Y624 299 aaKnown RBP2.35□□□□□ -2.03
FOXN3-203ENST00000553353 IGKV3D-20A0A0C4DH25 116 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 TRBV30A0A0K0K1B3 111 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 LOC389332A0A1B0GUA5 103 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 A0A1B0GX51 115 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 SMIM9A6NGZ8 99 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 E7EUB6 86 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 I3L2K1 104 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 M0R381 172 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 SNCGO76070 127 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 TRBV12-3P01733 135 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 IGHV3-11P01762 117 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 IGKV1-16P04430 117 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 RPL7P18124 248 aaKnown RBP2.34□□□□□ -2.03
FOXN3-203ENST00000553353 RPL27AP46776 148 aaKnown RBP2.34□□□□□ -2.03
FOXN3-203ENST00000553353 SYNJ2BPP57105 145 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 CD164Q04900 197 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 EDDM3AQ14507 147 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 FAM106AQ4KMX7 169 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 TMEM78Q5T7P6 136 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 AMTNQ6UX39 209 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 SMIM29Q86T20 159 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 C10orf126Q8N4M7 172 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 SLC25A29Q8N8R3 303 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 Q8NAQ8 132 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 NEXN-AS1Q8NBZ9 246 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 DNAJC30Q96LL9 226 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 RASL11BQ9BPW5 248 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 NAA38Q9BRA0 125 aaKnown RBP2.34□□□□□ -2.03
FOXN3-203ENST00000553353 MRPL20Q9BYC9 149 aaKnown RBP2.34□□□□□ -2.03
FOXN3-203ENST00000553353 FBXL15Q9H469 300 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 MRPL35Q9NZE8 188 aaKnown RBP2.34□□□□□ -2.03
FOXN3-203ENST00000553353 PRO1854Q9UHT4 67 aa2.34□□□□□ -2.03
FOXN3-203ENST00000553353 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.04
FOXN3-203ENST00000553353 IGLV5-37A0A075B6J1 123 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.33□□□□□ -2.04
FOXN3-203ENST00000553353 IGHV3-72A0A0B4J1Y9 119 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 TRAV41A0A0B4J266 112 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 A0A0B4J2C4 111 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 IGHV1-3A0A0C4DH29 117 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 IGHV4-28A0A0C4DH34 117 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 A0A0J9YX75 114 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 TRBV7-7A0A0K0K1E9 115 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 TRBV10-2A0A0K0K1G8 114 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 H3BT86 120 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 M0R2P5 195 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 DEFB4AO15263 64 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 SH2D1AO60880 128 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 DUSP14O95147 198 aaKnown RBP2.33□□□□□ -2.04
FOXN3-203ENST00000553353 OXTP01178 125 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 IGKV1-17P01599 117 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 CFC1BP0CG36 223 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 CFC1P0CG37 223 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 MYOD1P15172 320 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 FUSP35637 526 aaKnown RBP eCLIP2.33□□□□□ -2.043e-8■□□□□ 10.9
FOXN3-203ENST00000553353 PSMB2P49721 201 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 SEC61BP60468 96 aaKnown RBP2.33□□□□□ -2.04
FOXN3-203ENST00000553353 HERVK_113P61574 105 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 ERCC8Q13216 396 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 SRSF9Q13242 221 aaKnown RBP eCLIP2.33□□□□□ -2.043e-8■■■■□ 26.7
FOXN3-203ENST00000553353 SDIM1Q6ZPB5 146 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 C6orf223Q8N319 242 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 ANKRD29Q8N6D5 301 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 C15orf53Q8NAA6 179 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 RASL10AQ92737 203 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 TMEM141Q96I45 108 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 SLC50A1Q9BRV3 221 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
FOXN3-203ENST00000553353 MRPL36Q9P0J6 103 aaKnown RBP2.33□□□□□ -2.04
FOXN3-203ENST00000553353 LPAP08519 4548 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 TRAV8-1A0A0A6YYK1 113 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 TRAV10A0A0B4J240 114 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 A0A0J9YXY3 114 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 A0A0J9YY99 117 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 TINCRA0A1B0GVN0 87 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 SDHAF1A6NFY7 115 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 C11orf86A6NJI1 115 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 K7EIM0 57 aa2.32□□□□□ -2.04
FOXN3-203ENST00000553353 SLC25A20O43772 301 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms