RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TIMM21Q9BVV7 248 aa5.38□□□□□ -1.55
SYNE2-209ENST00000553308 CARHSP1Q9Y2V2 147 aaKnown RBP5.38□□□□□ -1.55
SYNE2-209ENST00000553308 TAGLN2P37802 199 aaKnown RBP5.37□□□□□ -1.55
SYNE2-209ENST00000553308 RPL39P62891 51 aaKnown RBP5.37□□□□□ -1.55
SYNE2-209ENST00000553308 TMEM241Q24JQ0 296 aa5.37□□□□□ -1.55
SYNE2-209ENST00000553308 C9orf129Q5T035 196 aaKnown RBP5.36□□□□□ -1.55
SYNE2-209ENST00000553308 TMEM18Q96B42 140 aa5.36□□□□□ -1.55
SYNE2-209ENST00000553308 A0A087X002 238 aa5.35□□□□□ -1.55
SYNE2-209ENST00000553308 TMEM250H0YL14 139 aa5.35□□□□□ -1.55
SYNE2-209ENST00000553308 ZNF861PO60384 105 aa5.35□□□□□ -1.55
SYNE2-209ENST00000553308 CEBPGP53567 150 aa5.35□□□□□ -1.55
SYNE2-209ENST00000553308 KIAA0087Q14695 138 aa5.35□□□□□ -1.55
SYNE2-209ENST00000553308 C2orf82Q6UX34 121 aa5.35□□□□□ -1.55
SYNE2-209ENST00000553308 BATF3Q9NR55 127 aa5.35□□□□□ -1.55
SYNE2-209ENST00000553308 IFITM10A6NMD0 228 aa5.34□□□□□ -1.55
SYNE2-209ENST00000553308 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
SYNE2-209ENST00000553308 PPP1R2P9O14990 202 aa5.34□□□□□ -1.55
SYNE2-209ENST00000553308 PPP1R17O96001 155 aa5.34□□□□□ -1.55
SYNE2-209ENST00000553308 HBBP68871 147 aa5.34□□□□□ -1.55
SYNE2-209ENST00000553308 MRPL51Q4U2R6 128 aaKnown RBP5.34□□□□□ -1.55
SYNE2-209ENST00000553308 SPANXA1Q9NS26 97 aa5.34□□□□□ -1.55
SYNE2-209ENST00000553308 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
SYNE2-209ENST00000553308 TGIF2-C20orf24A0A0A6YYL0 155 aa5.33□□□□□ -1.56
SYNE2-209ENST00000553308 TRBV30A0A0K0K1B3 111 aa5.33□□□□□ -1.56
SYNE2-209ENST00000553308 MRPS36P82909 103 aaKnown RBP5.33□□□□□ -1.56
SYNE2-209ENST00000553308 RIGQ13278 110 aa5.33□□□□□ -1.56
SYNE2-209ENST00000553308 LINC01551Q86U37 167 aa5.33□□□□□ -1.56
SYNE2-209ENST00000553308 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
SYNE2-209ENST00000553308 FAM104BQ5XKR9 115 aa5.32□□□□□ -1.56
SYNE2-209ENST00000553308 SLC51BQ86UW2 128 aa5.32□□□□□ -1.56
SYNE2-209ENST00000553308 TYMSOSQ8TAI1 123 aa5.32□□□□□ -1.56
SYNE2-209ENST00000553308 SMIM7Q9BQ49 75 aa5.32□□□□□ -1.56
SYNE2-209ENST00000553308 C20orf78Q9BR46 151 aa5.32□□□□□ -1.56
SYNE2-209ENST00000553308 CTDSP1Q9GZU7 261 aa5.32□□□□□ -1.56
SYNE2-209ENST00000553308 OSTCQ9NRP0 149 aa5.32□□□□□ -1.56
SYNE2-209ENST00000553308 V9GYV3 84 aa5.32□□□□□ -1.56
SYNE2-209ENST00000553308 NUPR1O60356 82 aa5.31□□□□□ -1.56
SYNE2-209ENST00000553308 RPL32P62910 135 aaKnown RBP5.31□□□□□ -1.56
SYNE2-209ENST00000553308 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
SYNE2-209ENST00000553308 LINC00469Q8N7U9 141 aa5.31□□□□□ -1.56
SYNE2-209ENST00000553308 PACRGQ96M98 296 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-209ENST00000553308 SMIM2Q9BVW6 85 aa5.31□□□□□ -1.56
SYNE2-209ENST00000553308 C22orf24Q9Y442 160 aa5.31□□□□□ -1.56
SYNE2-209ENST00000553308 TRBV24-1A0A075B6N3 115 aa5.3□□□□□ -1.56
SYNE2-209ENST00000553308 TCAPO15273 167 aa5.3□□□□□ -1.56
SYNE2-209ENST00000553308 TNFRSF6BO95407 300 aa5.3□□□□□ -1.56
SYNE2-209ENST00000553308 CRYGAP11844 174 aa5.3□□□□□ -1.56
SYNE2-209ENST00000553308 XAGE1AQ9HD64 81 aa5.3□□□□□ -1.56
SYNE2-209ENST00000553308 ANAPC11Q9NYG5 84 aa5.3□□□□□ -1.56
SYNE2-209ENST00000553308 LINC00862A6NCI5 91 aa5.29□□□□□ -1.56
SYNE2-209ENST00000553308 ZNF727A8MUV8 499 aa5.29□□□□□ -1.56
SYNE2-209ENST00000553308 NPYP01303 97 aa5.29□□□□□ -1.56
SYNE2-209ENST00000553308 CKS2P33552 79 aa5.29□□□□□ -1.56
SYNE2-209ENST00000553308 RPL28P46779 137 aaKnown RBP5.29□□□□□ -1.56
SYNE2-209ENST00000553308 KRTAP13-2Q52LG2 175 aa5.29□□□□□ -1.56
SYNE2-209ENST00000553308 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
SYNE2-209ENST00000553308 NAT8BQ9UHF3 227 aa5.29□□□□□ -1.56
SYNE2-209ENST00000553308 IGLV4-3A0A075B6K6 122 aa5.28□□□□□ -1.56
SYNE2-209ENST00000553308 D6R8Y8 96 aa5.28□□□□□ -1.56
SYNE2-209ENST00000553308 BCE1O60756 84 aa5.28□□□□□ -1.56
SYNE2-209ENST00000553308 IFI27P40305 119 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-209ENST00000553308 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
SYNE2-209ENST00000553308 ALKAL2Q6UX46 152 aa5.28□□□□□ -1.56
SYNE2-209ENST00000553308 BLOC1S1P78537 153 aa5.27□□□□□ -1.57
SYNE2-209ENST00000553308 FAM74A3Q4VXF1 159 aa5.27□□□□□ -1.57
SYNE2-209ENST00000553308 LBHQ53QV2 105 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-209ENST00000553308 ZC2HC1BQ5TFG8 222 aa5.27□□□□□ -1.57
SYNE2-209ENST00000553308 MRPL55Q7Z7F7 128 aaKnown RBP5.27□□□□□ -1.57
SYNE2-209ENST00000553308 EIF5A2Q9GZV4 153 aaKnown RBP5.27□□□□□ -1.57
SYNE2-209ENST00000553308 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
SYNE2-209ENST00000553308 IGLV7-46A0A075B6I9 117 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 PRSS2P07478 247 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 SRP19P09132 144 aaKnown RBP5.26□□□□□ -1.57
SYNE2-209ENST00000553308 CKS1BP61024 79 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 TCTE3Q8IZS6 198 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 LINC01561Q8N1V8 128 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 LINC00304Q8N9R0 145 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 TMEM141Q96I45 108 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 TP73-AS1Q9UF72 201 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 PYGO1Q9Y3Y4 419 aa5.26□□□□□ -1.57
SYNE2-209ENST00000553308 SMIM27A0A1W2PRY6 76 aa5.25□□□□□ -1.57
SYNE2-209ENST00000553308 RPL37AP8A6NKH3 93 aa5.25□□□□□ -1.57
SYNE2-209ENST00000553308 RPL23P62829 140 aaKnown RBP5.25□□□□□ -1.57
SYNE2-209ENST00000553308 MRPL54Q6P161 138 aaKnown RBP5.25□□□□□ -1.57
SYNE2-209ENST00000553308 TEX43Q6ZNM6 134 aa5.25□□□□□ -1.57
SYNE2-209ENST00000553308 LINC00173Q6ZV60 143 aa5.25□□□□□ -1.57
SYNE2-209ENST00000553308 A0A1B0GW15 77 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 GAGE10A6NGK3 116 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 RAB5AP20339 215 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 ADIRFQ15847 76 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 C6orf226Q5I0X4 101 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 Q6ZN92 141 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 KRTAP13-1Q8IUC0 172 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 Q8IZM0 81 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 LINC00167Q96N53 147 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 C2orf88Q9BSF0 95 aa5.24□□□□□ -1.57
SYNE2-209ENST00000553308 A0A1B0GXF2 115 aa5.23□□□□□ -1.57
SYNE2-209ENST00000553308 F8W036 122 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms