RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 BIRC6Q9NR09 4857 aa-0.26□□□□□ -2.45
CEP290-206ENST00000552770 MBD5Q9P267 1494 aa-0.27□□□□□ -2.45
CEP290-206ENST00000552770 KTN1Q86UP2 1357 aaKnown RBP-0.27□□□□□ -2.45
CEP290-206ENST00000552770 MYOZ3Q8TDC0 251 aa-0.27□□□□□ -2.45
CEP290-206ENST00000552770 LINC00472Q9H8W2 130 aa-0.27□□□□□ -2.45
CEP290-206ENST00000552770 SBF2Q86WG5 1849 aa-0.27□□□□□ -2.45
CEP290-206ENST00000552770 DCHS2Q6V1P9 2916 aa-0.27□□□□□ -2.45
CEP290-206ENST00000552770 ATRQ13535 2644 aa-0.28□□□□□ -2.45
CEP290-206ENST00000552770 TRBV6-1A0A0K0K1D8 114 aa-0.28□□□□□ -2.45
CEP290-206ENST00000552770 IGLC7A0M8Q6 106 aa-0.28□□□□□ -2.45
CEP290-206ENST00000552770 I3L2K1 104 aa-0.28□□□□□ -2.45
CEP290-206ENST00000552770 AKAIN1P0CW23 69 aa-0.28□□□□□ -2.45
CEP290-206ENST00000552770 LPAP08519 4548 aa-0.28□□□□□ -2.45
CEP290-206ENST00000552770 C10orf71Q711Q0 1435 aa-0.29□□□□□ -2.46
CEP290-206ENST00000552770 LRRK2Q5S007 2527 aa-0.29□□□□□ -2.46
CEP290-206ENST00000552770 KIF21AQ7Z4S6 1674 aa-0.29□□□□□ -2.46
CEP290-206ENST00000552770 HMGN4O00479 90 aa-0.29□□□□□ -2.46
CEP290-206ENST00000552770 PHLPP1O60346 1717 aa-0.3□□□□□ -2.46
CEP290-206ENST00000552770 RIMS1Q86UR5 1692 aaKnown RBP-0.3□□□□□ -2.46
CEP290-206ENST00000552770 LAMC1P11047 1609 aa-0.3□□□□□ -2.46
CEP290-206ENST00000552770 DNHD1Q96M86 4753 aa-0.3□□□□□ -2.46
CEP290-206ENST00000552770 PP6455Q8WZ26 134 aa-0.3□□□□□ -2.46
CEP290-206ENST00000552770 FOCADQ5VW36 1801 aa-0.3□□□□□ -2.46
CEP290-206ENST00000552770 TRANK1O15050 2925 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 NBEAL1Q6ZS30 2694 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 SFT2D2O95562 160 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 TNFP01375 233 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 SPRR2DP22532 72 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 WHAMMP3Q1A5X7 153 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 MRPL54Q6P161 138 aaKnown RBP-0.31□□□□□ -2.46
CEP290-206ENST00000552770 RAPGEF6Q8TEU7 1601 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 ZNF236Q9UL36 1845 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 HSPG2P98160 4391 aa-0.31□□□□□ -2.46
CEP290-206ENST00000552770 CSPG4Q6UVK1 2322 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 A2ML1A8K2U0 1454 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 FXYD6-FXYD2A0A087WZ82 144 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 EFCAB10A6NFE3 127 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 MGPP08493 103 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 UQCR10Q9UDW1 63 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 LRP2P98164 4655 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 APC2O95996 2303 aa-0.32□□□□□ -2.46
CEP290-206ENST00000552770 GCN1Q92616 2671 aaKnown RBP-0.32□□□□□ -2.46
CEP290-206ENST00000552770 UBE2L5PA0A1B0GUS4 154 aa-0.33□□□□□ -2.46
CEP290-206ENST00000552770 LOC100130705A0A1B0GUX0 176 aa-0.33□□□□□ -2.46
CEP290-206ENST00000552770 ATP5EP56381 51 aaPredicted RBP-0.33□□□□□ -2.46
CEP290-206ENST00000552770 UBE2L3P68036 154 aaKnown RBP-0.33□□□□□ -2.46
CEP290-206ENST00000552770 TSLPQ969D9 159 aa-0.33□□□□□ -2.46
CEP290-206ENST00000552770 FAT2Q9NYQ8 4349 aa-0.33□□□□□ -2.46
CEP290-206ENST00000552770 MAP1AP78559 2803 aaPredicted RBP-0.33□□□□□ -2.46
CEP290-206ENST00000552770 ALMS1Q8TCU4 4167 aa-0.34□□□□□ -2.46
CEP290-206ENST00000552770 RPL13AP3Q6NVV1 102 aa-0.34□□□□□ -2.46
CEP290-206ENST00000552770 FAIMQ9NVQ4 179 aa-0.34□□□□□ -2.46
CEP290-206ENST00000552770 SMG6Q86US8 1419 aaKnown RBP-0.35□□□□□ -2.47
CEP290-206ENST00000552770 COX6B1P14854 86 aa-0.35□□□□□ -2.47
CEP290-206ENST00000552770 KRTAP19-6Q3LI70 58 aa-0.35□□□□□ -2.47
CEP290-206ENST00000552770 TMEM263Q8WUH6 116 aaKnown RBP-0.35□□□□□ -2.47
CEP290-206ENST00000552770 NXT2Q9NPJ8 142 aaKnown RBP-0.35□□□□□ -2.47
CEP290-206ENST00000552770 ROCK2O75116 1388 aaKnown RBP-0.35□□□□□ -2.47
CEP290-206ENST00000552770 ITPR3Q14573 2671 aa-0.35□□□□□ -2.47
CEP290-206ENST00000552770 PAPPAQ13219 1627 aa-0.35□□□□□ -2.47
CEP290-206ENST00000552770 WNK1Q9H4A3 2382 aa-0.35□□□□□ -2.47
CEP290-206ENST00000552770 WDR7Q9Y4E6 1490 aa-0.35□□□□□ -2.47
CEP290-206ENST00000552770 LAMA2P24043 3122 aaKnown RBP-0.35□□□□□ -2.47
CEP290-206ENST00000552770 FAT1Q14517 4588 aa-0.36□□□□□ -2.47
CEP290-206ENST00000552770 MYOM1P52179 1685 aa-0.36□□□□□ -2.47
CEP290-206ENST00000552770 CHKB-CPT1BH3BT56 60 aa-0.36□□□□□ -2.47
CEP290-206ENST00000552770 MT4P47944 62 aa-0.36□□□□□ -2.47
CEP290-206ENST00000552770 C9orf153Q5TBE3 101 aa-0.36□□□□□ -2.47
CEP290-206ENST00000552770 PRRC2CQ9Y520 2896 aaKnown RBP-0.37□□□□□ -2.47
CEP290-206ENST00000552770 FAM24AA6NFZ4 105 aa-0.37□□□□□ -2.47
CEP290-206ENST00000552770 OOSP1A8MZH6 123 aa-0.37□□□□□ -2.47
CEP290-206ENST00000552770 KRTAP20-2Q3LI61 65 aa-0.37□□□□□ -2.47
CEP290-206ENST00000552770 DEFB123Q8N688 67 aa-0.37□□□□□ -2.47
CEP290-206ENST00000552770 WDFY4Q6ZS81 3184 aa-0.37□□□□□ -2.47
CEP290-206ENST00000552770 CEP295Q9C0D2 2601 aa-0.37□□□□□ -2.47
CEP290-206ENST00000552770 NIPBLQ6KC79 2804 aaeCLIP-0.37□□□□□ -2.47
CEP290-206ENST00000552770 URB1O60287 2271 aaKnown RBP-0.38□□□□□ -2.47
CEP290-206ENST00000552770 MYO15AQ9UKN7 3530 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 PSME4Q14997 1843 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 STARD9Q9P2P6 4700 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 FAM167A-AS1Q96KT0 104 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 CDC42SE2Q9NRR3 84 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 IER3IP1Q9Y5U9 82 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 QRICH2Q9H0J4 1663 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 NF1P21359 2839 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 TCHHQ07283 1943 aa-0.38□□□□□ -2.47
CEP290-206ENST00000552770 TNRC18O15417 2968 aaPredicted RBP-0.39□□□□□ -2.47
CEP290-206ENST00000552770 POLA1P09884 1462 aaPredicted RBP-0.39□□□□□ -2.47
CEP290-206ENST00000552770 LINC00474Q9P2X8 69 aa-0.39□□□□□ -2.47
CEP290-206ENST00000552770 CELSR3Q9NYQ7 3312 aa-0.39□□□□□ -2.47
CEP290-206ENST00000552770 CFAP46Q8IYW2 2715 aa-0.4□□□□□ -2.47
CEP290-206ENST00000552770 HECTD4Q9Y4D8 3996 aa-0.4□□□□□ -2.47
CEP290-206ENST00000552770 TLN1Q9Y490 2541 aaKnown RBP-0.4□□□□□ -2.47
CEP290-206ENST00000552770 F6UZH7 168 aa-0.4□□□□□ -2.47
CEP290-206ENST00000552770 SPRR4Q96PI1 79 aa-0.4□□□□□ -2.47
CEP290-206ENST00000552770 DPH3P1Q9H4G8 78 aa-0.4□□□□□ -2.47
CEP290-206ENST00000552770 ZFHX3Q15911 3703 aa-0.41□□□□□ -2.47
CEP290-206ENST00000552770 FLNBO75369 2602 aaKnown RBP-0.41□□□□□ -2.47
CEP290-206ENST00000552770 UTP20O75691 2785 aaKnown RBP-0.41□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms