RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SLPIP03973 132 aa11.92□□□□□ -0.5
PRPF40B-216ENST00000552301 SCXQ7RTU7 201 aa11.92□□□□□ -0.5
PRPF40B-216ENST00000552301 CHAC1Q9BUX1 264 aa11.92□□□□□ -0.5
PRPF40B-216ENST00000552301 LINC01549A6NIU2 74 aa11.91□□□□□ -0.5
PRPF40B-216ENST00000552301 TOMM6Q96B49 74 aa11.91□□□□□ -0.5
PRPF40B-216ENST00000552301 IGIPA6NJ69 53 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 FAM229AH3BQW9 127 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 Q5VSD8 79 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 CBLN2Q8IUK8 224 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 LINC00526Q96FQ7 95 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 CARD19Q96LW7 228 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 TIMM17AQ99595 171 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 KRTAP4-5Q9BYR2 181 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 PKIGQ9Y2B9 76 aa11.9□□□□□ -0.5
PRPF40B-216ENST00000552301 DNAH8Q96JB1 4490 aa11.9□□□□□ -0.51
PRPF40B-216ENST00000552301 SDIM1Q6ZPB5 146 aa11.89□□□□□ -0.51
PRPF40B-216ENST00000552301 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
PRPF40B-216ENST00000552301 LINC01546A6NGU7 62 aa11.88□□□□□ -0.51
PRPF40B-216ENST00000552301 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
PRPF40B-216ENST00000552301 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
PRPF40B-216ENST00000552301 ERASQ7Z444 233 aa11.88□□□□□ -0.51
PRPF40B-216ENST00000552301 C18orf32Q8TCD1 76 aa11.88□□□□□ -0.51
PRPF40B-216ENST00000552301 AMELXQ99217 191 aa11.88□□□□□ -0.51
PRPF40B-216ENST00000552301 IGLV4-69A0A075B6H9 119 aa11.87□□□□□ -0.51
PRPF40B-216ENST00000552301 UBE2D1P51668 147 aa11.87□□□□□ -0.51
PRPF40B-216ENST00000552301 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
PRPF40B-216ENST00000552301 ZC2HC1BQ5TFG8 222 aa11.87□□□□□ -0.51
PRPF40B-216ENST00000552301 OR10D4PQ8NGN7 298 aa11.87□□□□□ -0.51
PRPF40B-216ENST00000552301 CIRBP-AS1Q8TBR5 109 aa11.87□□□□□ -0.51
PRPF40B-216ENST00000552301 ORAOV1Q8WV07 137 aa11.87□□□□□ -0.51
PRPF40B-216ENST00000552301 YPEL4Q96NS1 127 aa11.87□□□□□ -0.51
PRPF40B-216ENST00000552301 RAB5BP61020 215 aa11.86□□□□□ -0.51
PRPF40B-216ENST00000552301 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
PRPF40B-216ENST00000552301 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
PRPF40B-216ENST00000552301 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
PRPF40B-216ENST00000552301 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.86□□□□□ -0.51
PRPF40B-216ENST00000552301 SEC11AP67812 179 aa11.85□□□□□ -0.51
PRPF40B-216ENST00000552301 COX6A2Q02221 97 aa11.85□□□□□ -0.51
PRPF40B-216ENST00000552301 LINC00528Q8N1L1 170 aa11.85□□□□□ -0.51
PRPF40B-216ENST00000552301 A0A087WZ39 114 aa11.84□□□□□ -0.51
PRPF40B-216ENST00000552301 LINC00614P0C842 121 aa11.84□□□□□ -0.51
PRPF40B-216ENST00000552301 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
PRPF40B-216ENST00000552301 CHTF8P0CG12 524 aa11.83□□□□□ -0.52
PRPF40B-216ENST00000552301 GEMIN7Q9H840 131 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-216ENST00000552301 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
PRPF40B-216ENST00000552301 PLA2G1BP04054 148 aaKnown RBP11.82□□□□□ -0.52
PRPF40B-216ENST00000552301 HERVK_113P63121 156 aa11.82□□□□□ -0.52
PRPF40B-216ENST00000552301 Q6ZRU5 148 aa11.82□□□□□ -0.52
PRPF40B-216ENST00000552301 PANO1I0J062 215 aa11.81□□□□□ -0.52
PRPF40B-216ENST00000552301 HBDP02042 147 aa11.81□□□□□ -0.52
PRPF40B-216ENST00000552301 F8WDY8 70 aa11.8□□□□□ -0.52
PRPF40B-216ENST00000552301 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-216ENST00000552301 NDUFA1O15239 70 aa11.8□□□□□ -0.52
PRPF40B-216ENST00000552301 CIRBPQ14011 172 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-216ENST00000552301 MAJINQ3KP22 176 aa11.8□□□□□ -0.52
PRPF40B-216ENST00000552301 LINC01561Q8N1V8 128 aa11.8□□□□□ -0.52
PRPF40B-216ENST00000552301 SPACA4Q8TDM5 124 aa11.8□□□□□ -0.52
PRPF40B-216ENST00000552301 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-216ENST00000552301 PMVKQ15126 192 aa11.79□□□□□ -0.52
PRPF40B-216ENST00000552301 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
PRPF40B-216ENST00000552301 URB1-AS1Q96HZ7 61 aa11.79□□□□□ -0.52
PRPF40B-216ENST00000552301 LINC00474Q9P2X8 69 aa11.79□□□□□ -0.52
PRPF40B-216ENST00000552301 A0A096LNI7 61 aa11.78□□□□□ -0.52
PRPF40B-216ENST00000552301 A0A0J9YXV3 536 aa11.78□□□□□ -0.52
PRPF40B-216ENST00000552301 LOC107984640A0A0U1RRK4 108 aa11.78□□□□□ -0.52
PRPF40B-216ENST00000552301 PMCHL1Q16048 86 aa11.78□□□□□ -0.52
PRPF40B-216ENST00000552301 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
PRPF40B-216ENST00000552301 KRTAP3-2Q9BYR7 98 aa11.78□□□□□ -0.52
PRPF40B-216ENST00000552301 FAT1Q14517 4588 aa11.78□□□□□ -0.52
PRPF40B-216ENST00000552301 A0A087WYN8 130 aa11.77□□□□□ -0.53
PRPF40B-216ENST00000552301 PRSS2P07478 247 aa11.77□□□□□ -0.53
PRPF40B-216ENST00000552301 LINC00469Q8N7U9 141 aa11.77□□□□□ -0.53
PRPF40B-216ENST00000552301 CST9LQ9H4G1 147 aa11.77□□□□□ -0.53
PRPF40B-216ENST00000552301 A0A096LNJ9 63 aa11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 TRGC2P03986 189 aa11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 INAFM2P0DMQ5 153 aa11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 NDUFA6P56556 154 aa11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 GAGE2BQ13066 116 aa11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 CHCHD1Q96BP2 118 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 MRPL35Q9NZE8 188 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 TOMM7Q9P0U1 55 aa11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 CDKN2A-AS1Q9UH64 79 aa11.76□□□□□ -0.53
PRPF40B-216ENST00000552301 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
PRPF40B-216ENST00000552301 ATP5LO75964 103 aa11.75□□□□□ -0.53
PRPF40B-216ENST00000552301 RPL18AQ02543 176 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-216ENST00000552301 RNF151Q2KHN1 245 aa11.75□□□□□ -0.53
PRPF40B-216ENST00000552301 BAGE3Q86Y29 109 aa11.75□□□□□ -0.53
PRPF40B-216ENST00000552301 STPG4Q8N801 248 aa11.74□□□□□ -0.53
PRPF40B-216ENST00000552301 PTTG1IPP53801 180 aa11.73□□□□□ -0.53
PRPF40B-216ENST00000552301 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
PRPF40B-216ENST00000552301 HSBP1O75506 76 aa11.72□□□□□ -0.53
PRPF40B-216ENST00000552301 CKS1BP61024 79 aa11.72□□□□□ -0.53
PRPF40B-216ENST00000552301 RPL37AP61513 92 aaKnown RBP11.72□□□□□ -0.53
PRPF40B-216ENST00000552301 KIAA0087Q14695 138 aa11.72□□□□□ -0.53
PRPF40B-216ENST00000552301 PDZD11Q5EBL8 140 aa11.72□□□□□ -0.53
PRPF40B-216ENST00000552301 UNQ6190/PRO20217Q6UXQ8 127 aa11.72□□□□□ -0.53
PRPF40B-216ENST00000552301 COLCA2A8K830 154 aa11.71□□□□□ -0.53
PRPF40B-216ENST00000552301 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
PRPF40B-216ENST00000552301 C10orf25Q5T742 122 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms