RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 MAP1LC3AQ9H492 121 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 TRBV24-1A0A075B6N3 115 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 LINC00959A0A1B0GUT2 108 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 PHOX2AO14813 284 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 CCL25O15444 150 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 TRIAP1O43715 76 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 NPYP01303 97 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 RPL32P62910 135 aaKnown RBP3.85□□□□□ -1.79
CCDC65-204ENST00000552188 S100A12P80511 92 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 MRPL52Q86TS9 123 aaKnown RBP3.85□□□□□ -1.79
CCDC65-204ENST00000552188 IMMP2LQ96T52 175 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 SEC11CQ9BY50 192 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 CDC42SE2Q9NRR3 84 aa3.85□□□□□ -1.79
CCDC65-204ENST00000552188 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 IGHV3-64A0A075B6Q5 118 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 TRAV13-1A0A0B4J241 112 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 C1orf196B1AJZ1 125 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 INAFM2P0DMQ5 153 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.79
CCDC65-204ENST00000552188 GAGE2BQ13066 116 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 NDUFA5Q16718 116 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 GAGE2EQ4V326 116 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 HIGD2BQ4VC39 106 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
CCDC65-204ENST00000552188 Q5VSD8 79 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 GAGE2AQ6NT46 116 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 C9orf163Q8N9P6 203 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 RPS10P5Q9NQ39 176 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 GAGE2DQ9UEU5 116 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 LAMTOR2Q9Y2Q5 125 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 UBE2D4Q9Y2X8 147 aa3.84□□□□□ -1.79
CCDC65-204ENST00000552188 TRAV9-1A0A075B6T8 112 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 IGHV1-58A0A0C4DH39 117 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 APOMO95445 188 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 ADCYAP1P18509 176 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 G0S2P27469 103 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 RPL39P62891 51 aaKnown RBP3.83□□□□□ -1.8
CCDC65-204ENST00000552188 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 Q8N8P6 123 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 CHAC1Q9BUX1 264 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 TIMM21Q9BVV7 248 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 PKIGQ9Y2B9 76 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 HERC2O95714 4834 aa3.83□□□□□ -1.8
CCDC65-204ENST00000552188 APOBP04114 4563 aaKnown RBP3.82□□□□□ -1.8
CCDC65-204ENST00000552188 IFITM10A6NMD0 228 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 COX7A2LO14548 114 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 CNBPP62633 177 aaKnown RBP3.82□□□□□ -1.8
CCDC65-204ENST00000552188 FOXI1Q12951 378 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 RHEBQ15382 184 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 COX19Q49B96 90 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 ORMDL2Q53FV1 153 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 Q6ZN92 141 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 Q6ZUT4 128 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 SCXQ7RTU7 201 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 C15orf56Q8N910 161 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 PRSS3P2Q8NHM4 247 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 KRTAP4-5Q9BYR2 181 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 SPANXA1Q9NS26 97 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 CYSLTR1Q9Y271 337 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 RYR1P21817 5038 aa3.82□□□□□ -1.8
CCDC65-204ENST00000552188 HSPG2P98160 4391 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 GVQW2A0A096LPI5 108 aaPredicted RBP3.81□□□□□ -1.8
CCDC65-204ENST00000552188 TGIF2-C20orf24A0A0A6YYL0 155 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 K7EMI3 77 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 SNAPINO95295 136 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 APOC3P02656 99 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 MRPS36P82909 103 aaKnown RBP3.81□□□□□ -1.8
CCDC65-204ENST00000552188 FABP9Q0Z7S8 132 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 UBE2V1Q13404 147 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 KIAA1644Q3SXP7 199 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 C5orf47Q569G3 176 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 TEX43Q6ZNM6 134 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 Q6ZSA8 131 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 C5orf38Q86SI9 138 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 CIRBP-AS1Q8TBR5 109 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 C2orf88Q9BSF0 95 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 GNB1LQ9BYB4 327 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 NXT2Q9NPJ8 142 aaKnown RBP3.81□□□□□ -1.8
CCDC65-204ENST00000552188 SMCO4Q9NRQ5 59 aa3.81□□□□□ -1.8
CCDC65-204ENST00000552188 IGKV2-24A0A0C4DH68 120 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 MT-ND6P03923 174 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 COX6A2Q02221 97 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 SYCNQ0VAF6 134 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 PAPPA-AS1Q5QFB9 102 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 SVBPQ8N300 66 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 LINC00526Q96FQ7 95 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 CARD19Q96LW7 228 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 CAMK2N2Q96S95 79 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 OPRPNQ99935 248 aaPredicted RBP3.8□□□□□ -1.8
CCDC65-204ENST00000552188 CARHSP1Q9Y2V2 147 aaKnown RBP3.8□□□□□ -1.8
CCDC65-204ENST00000552188 PYGO1Q9Y3Y4 419 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 DNAH8Q96JB1 4490 aa3.8□□□□□ -1.8
CCDC65-204ENST00000552188 IGLV4-69A0A075B6H9 119 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 SLPIP03973 132 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms