RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 BCL2L11O43521 198 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 APCSP02743 223 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 UBE2BP63146 152 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 SS18Q15532 418 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 BAGE2Q86Y30 109 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 TMEM101Q96IK0 257 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 BTF3L4Q96K17 158 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 RPP21Q9H633 154 aaKnown RBP3.13□□□□□ -1.91
HOXB3-213ENST00000552000 CBY1Q9Y3M2 126 aa3.13□□□□□ -1.91
HOXB3-213ENST00000552000 IGLV5-37A0A075B6J1 123 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 IGLV5-39A0A0G2JS06 123 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 MAP1LC3B2A6NCE7 125 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 C19orf71A6NCJ1 209 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 INMT-MINDY4F8WBC2 141 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 H7C423 109 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 COX7A2LO14548 114 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 SSNA1O43805 119 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 TRGC1P0CF51 173 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 IGLC6P0CF74 106 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 CRYGAP11844 174 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 ZNF25P17030 456 aaPredicted RBP3.12□□□□□ -1.91
HOXB3-213ENST00000552000 GATD1Q8NB37 220 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 OR2D3Q8NGH3 330 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 ENKURQ8TC29 256 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 RPL39LQ96EH5 51 aaKnown RBP3.12□□□□□ -1.91
HOXB3-213ENST00000552000 C2orf48Q96LS8 159 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 CCDC32Q9BV29 185 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 MAP1LC3BQ9GZQ8 125 aa3.12□□□□□ -1.91
HOXB3-213ENST00000552000 IGLV5-45A0A087WSX0 123 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 M0QXV9 152 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 ZNF861PO60384 105 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 NCR2O95944 276 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 SPAG11BQ08648 103 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 AKR1C8PQ5T2L2 129 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 C5orf38Q86SI9 138 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 TCEAL7Q9BRU2 100 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
HOXB3-213ENST00000552000 FLGP20930 4061 aaPredicted RBP3.1□□□□□ -1.91
HOXB3-213ENST00000552000 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
HOXB3-213ENST00000552000 ESDP10768 282 aa3.1□□□□□ -1.91
HOXB3-213ENST00000552000 RPS20P60866 119 aaKnown RBP3.1□□□□□ -1.91
HOXB3-213ENST00000552000 RPL7L1Q6DKI1 246 aaKnown RBP3.1□□□□□ -1.91
HOXB3-213ENST00000552000 LYZL1Q6UWQ5 148 aa3.1□□□□□ -1.91
HOXB3-213ENST00000552000 LINC00173Q6ZV60 143 aa3.1□□□□□ -1.91
HOXB3-213ENST00000552000 IMMP2LQ96T52 175 aa3.1□□□□□ -1.91
HOXB3-213ENST00000552000 CDC42SE2Q9NRR3 84 aa3.1□□□□□ -1.91
HOXB3-213ENST00000552000 ANAPC11Q9NYG5 84 aa3.1□□□□□ -1.91
HOXB3-213ENST00000552000 IGKV2D-30A0A075B6S6 120 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 TRAV13-1A0A0B4J241 112 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 A0A1B0GV50 99 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 C1orf196B1AJZ1 125 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 G3V3Q6 166 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 IFNA1P01562 189 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 PMCHP20382 165 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 RNASE13Q5GAN3 156 aaKnown RBP3.09□□□□□ -1.91
HOXB3-213ENST00000552000 LINC00304Q8N9R0 145 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 FAM218AQ96MZ4 157 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 MAP1LC3CQ9BXW4 147 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 PPDPFQ9H3Y8 114 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 TMEM242Q9NWH2 141 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 MRPL35Q9NZE8 188 aaKnown RBP3.09□□□□□ -1.91
HOXB3-213ENST00000552000 ALG5Q9Y673 324 aa3.09□□□□□ -1.91
HOXB3-213ENST00000552000 BORCS7-ASMTA0A0B4J1R7 106 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 A0A1B0GW15 77 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 F2Z2F3 143 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 I3L3M4 83 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 NDUFA1O15239 70 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 PFDN1O60925 122 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 HSBP1O75506 76 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 TSHBP01222 138 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 RPL35P42766 123 aaKnown RBP3.08□□□□□ -1.92
HOXB3-213ENST00000552000 TWIST1Q15672 202 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 KRTAP13-2Q52LG2 175 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 UNQ6190/PRO20217Q6UXQ8 127 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 TMUB2Q71RG4 321 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 MRPL52Q86TS9 123 aaKnown RBP3.08□□□□□ -1.92
HOXB3-213ENST00000552000 ORAOV1Q8WV07 137 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 SMDT1Q9H4I9 107 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
HOXB3-213ENST00000552000 C7orf77A4D0Y5 90 aa3.07□□□□□ -1.92
HOXB3-213ENST00000552000 TLX1NBP0CAT3 122 aa3.07□□□□□ -1.92
HOXB3-213ENST00000552000 FOXA3P55318 350 aaPredicted RBP3.07□□□□□ -1.92
HOXB3-213ENST00000552000 ASB16-AS1Q495Z4 193 aa3.07□□□□□ -1.92
HOXB3-213ENST00000552000 CENPWQ5EE01 88 aa3.07□□□□□ -1.92
HOXB3-213ENST00000552000 C9orf129Q5T035 196 aaKnown RBP3.07□□□□□ -1.92
HOXB3-213ENST00000552000 LINC00337Q8N6G1 96 aa3.07□□□□□ -1.92
HOXB3-213ENST00000552000 OR10D4PQ8NGN7 298 aa3.07□□□□□ -1.92
HOXB3-213ENST00000552000 MARVELD1Q9BSK0 173 aa3.07□□□□□ -1.92
HOXB3-213ENST00000552000 RNASE7Q9H1E1 156 aaKnown RBP3.07□□□□□ -1.92
HOXB3-213ENST00000552000 NUPR1O60356 82 aa3.06□□□□□ -1.92
HOXB3-213ENST00000552000 CTRLP40313 264 aa3.06□□□□□ -1.92
HOXB3-213ENST00000552000 RPL28P46779 137 aaKnown RBP3.06□□□□□ -1.92
HOXB3-213ENST00000552000 TMEM241Q24JQ0 296 aa3.06□□□□□ -1.92
HOXB3-213ENST00000552000 C5orf47Q569G3 176 aa3.06□□□□□ -1.92
HOXB3-213ENST00000552000 Q5BKY6 102 aa3.06□□□□□ -1.92
HOXB3-213ENST00000552000 TEX261Q6UWH6 196 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms