RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 TSHBP01222 138 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 TRGC2P03986 189 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 COTL1Q14019 142 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 Q8N8P6 123 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 KIR2DL4Q99706 377 aa4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 NXT2Q9NPJ8 142 aaKnown RBP4.3□□□□□ -1.72
DEPDC4-210ENST00000551642 TRBV25-1A0A075B6N4 114 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 TRAV8-6A0A0B4J262 113 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 NBDYA0A0U1RRE5 68 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 H7C423 109 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 ESDP10768 282 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 C18orf32Q8TCD1 76 aa4.29□□□□□ -1.72
DEPDC4-210ENST00000551642 IGLV5-45A0A087WSX0 123 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 LOC389332A0A1B0GUA5 103 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 K7EP13 123 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 SIVA1O15304 175 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 DNAH10OSP0CZ25 163 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 FCER1GP30273 86 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 IFI27P40305 119 aaPredicted RBP4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 PKIAP61925 76 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 RPL24P83731 157 aaKnown RBP4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 Q0VG73 95 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 NIT1Q86X76 327 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 WFDC10BQ8IUB3 73 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 TMEM243Q9BU79 118 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 CHCHD7Q9BUK0 85 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 Q9H8V8 135 aa4.28□□□□□ -1.72
DEPDC4-210ENST00000551642 LINC00614P0C842 121 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 ZNF25P17030 456 aaPredicted RBP4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 G0S2P27469 103 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 RAB5BP61020 215 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 LAGE3Q14657 143 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 ORMDL2Q53FV1 153 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 LINC01556Q5JQF7 62 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 C20orf203Q8NBC4 194 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
DEPDC4-210ENST00000551642 TRAV9-2A0A087WT02 112 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 A0A087WX48 190 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 LINC01549A6NIU2 74 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 C1orf196B1AJZ1 125 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 UBE2L6O14933 153 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 SMAGPQ0VAQ4 97 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 FA2HQ7L5A8 372 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 MRPL52Q86TS9 123 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 TIMM21Q9BVV7 248 aa4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 CSDC2Q9Y534 153 aaKnown RBP4.26□□□□□ -1.73
DEPDC4-210ENST00000551642 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 IGKV2-29A2NJV5 120 aaPredicted RBP4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 TMEM262E9PQX1 116 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 FGF6P10767 208 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 RBX1P62877 108 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 MPV17L2Q567V2 206 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 TTC32Q5I0X7 151 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 BAGE3Q86Y29 109 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 CYSLTR1Q9Y271 337 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 UBE2D4Q9Y2X8 147 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
DEPDC4-210ENST00000551642 IBA57-AS1B1ANH7 110 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 SMIM1B2RUZ4 78 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 RPL39P62891 51 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 COA6Q5JTJ3 125 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 AMMECR1LQ6DCA0 310 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 RNASEKQ6P5S7 137 aaKnown RBP4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 Q8N976 141 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 TOMM6Q96B49 74 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 TMEM101Q96IK0 257 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 SPANXA1Q9NS26 97 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 PRR34Q9NV39 138 aa4.24□□□□□ -1.73
DEPDC4-210ENST00000551642 IGLV4-60A0A075B6I1 120 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 A0A096LNJ9 63 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGIPA6NJ69 53 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 HSBP1O75506 76 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 SERF1AO75920 110 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGHV3-30P01768 117 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGHV3-33P01772 117 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 HBDP02042 147 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGHV3-30-3P0DP02 117 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 IGHV3-30-5P0DP03 117 aa4.23□□□□□ -1.73
DEPDC4-210ENST00000551642 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms