RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PYDC2Q56P42 97 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 S100A7AQ86SG5 101 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 Q86TA4 180 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 KRTAP13-1Q8IUC0 172 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 C5orf17Q8NAS9 161 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 OR10AG1Q8NH19 301 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 PPP1R1CQ8WVI7 109 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 HYLS1Q96M11 299 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 MARVELD1Q9BSK0 173 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 MAP1LC3CQ9BXW4 147 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 PSORS1C2Q9UIG4 136 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 CBY1Q9Y3M2 126 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 LSM5Q9Y4Y9 91 aaKnown RBP1.31□□□□□ -2.2
CPSF6-207ENST00000551516 HSPB11Q9Y547 144 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 IGHV3-64A0A075B6Q5 118 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 RAB19A4D1S5 217 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 GRIFINA4D1Z8 144 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 FABP5P3A8MUU1 101 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 A8MWL6 223 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 H3BVH4 76 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 HMGB3O15347 200 aaKnown RBP1.3□□□□□ -2.2
CPSF6-207ENST00000551516 SH2D1AO60880 128 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 GZMBP10144 247 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 RPL12P30050 165 aaKnown RBP1.3□□□□□ -2.2
CPSF6-207ENST00000551516 FAUP35544 74 aaKnown RBP1.3□□□□□ -2.2
CPSF6-207ENST00000551516 UBE2L3P68036 154 aaKnown RBP1.3□□□□□ -2.2
CPSF6-207ENST00000551516 RAB31Q13636 194 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 SS18Q15532 418 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 TAL2Q16559 108 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 SAPCD1Q5SSQ6 148 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 LINC00299Q6ZSB3 139 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 NUP35Q8NFH5 326 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 RMI2Q96E14 147 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 AQP10Q96PS8 301 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 PSMG3Q9BT73 122 aaPredicted RBP1.3□□□□□ -2.2
CPSF6-207ENST00000551516 SH3BGRL3Q9H299 93 aa1.3□□□□□ -2.2
CPSF6-207ENST00000551516 FAM240AA0A1B0GVK7 77 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 B4DEV8 164 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 TCAPO15273 167 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 NDUFS5O43920 106 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 OR7C2O60412 319 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 ANGP03950 147 aaKnown RBP1.29□□□□□ -2.2
CPSF6-207ENST00000551516 IGLV7-43P04211 117 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 NTF3P20783 257 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 CSN1S1P47710 185 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 POLR2KP53803 58 aaKnown RBP1.29□□□□□ -2.2
CPSF6-207ENST00000551516 FOXA3P55318 350 aaPredicted RBP1.29□□□□□ -2.2
CPSF6-207ENST00000551516 HBG1P69891 147 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 HBG2P69892 147 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 ELOBQ15370 118 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 TPRXLQ17RH7 258 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 KHDC3LQ587J8 217 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 MRPL52Q86TS9 123 aaKnown RBP1.29□□□□□ -2.2
CPSF6-207ENST00000551516 ORMDL3Q8N138 153 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 C9orf62Q8N4C0 152 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 GATD1Q8NB37 220 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 MBD3L1Q8WWY6 194 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 LINC00526Q96FQ7 95 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 NAGKQ9UJ70 344 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 TNFSF18Q9UNG2 199 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 ZFP30Q9Y2G7 519 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 NEBP20929 6669 aa1.29□□□□□ -2.2
CPSF6-207ENST00000551516 A0A087WX48 190 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 TRBV6-5A0A0K0K1A5 114 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 MUC21A0A140T8X8 626 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 LINC00959A0A1B0GUT2 108 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 COLCA2A8K830 154 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 FAM25EA8MYX2 175 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 INMT-MINDY4F8WBC2 141 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 M0R036 132 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 SEC11BP0C7V7 166 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 CDC34P49427 236 aaPredicted RBP1.28□□□□□ -2.2
CPSF6-207ENST00000551516 TAS2R45P59539 299 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 CCL20P78556 96 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 SERF2P84101 59 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 MOBPQ13875 183 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 KRTAP13-3Q3SY46 172 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 LGALSLQ3ZCW2 172 aaPredicted RBP1.28□□□□□ -2.2
CPSF6-207ENST00000551516 ASB16-AS1Q495Z4 193 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 LUZP6Q538Z0 58 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 C9orf116Q5BN46 136 aaPredicted RBP1.28□□□□□ -2.2
CPSF6-207ENST00000551516 RPL7L1Q6DKI1 246 aaKnown RBP1.28□□□□□ -2.2
CPSF6-207ENST00000551516 SLC25A34Q6PIV7 304 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 CLPSL2Q6UWE3 100 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 PHF5AQ7RTV0 110 aaKnown RBP1.28□□□□□ -2.2
CPSF6-207ENST00000551516 PRNTQ86SH4 94 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 STX12Q86Y82 276 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 SPANXA2-OT1Q8N9U9 137 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 ORAOV1Q8WV07 137 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 HIST1H2BAQ96A08 127 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 DERL1Q9BUN8 251 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 CDC42SE2Q9NRR3 84 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 PRO0628Q9UI54 55 aa1.28□□□□□ -2.2
CPSF6-207ENST00000551516 CARHSP1Q9Y2V2 147 aaKnown RBP1.28□□□□□ -2.2
CPSF6-207ENST00000551516 IGHV6-1A0A0B4J1U7 121 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 IGHV1-24A0A0C4DH33 117 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 IGKV2-24A0A0C4DH68 120 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 TRBV27A0A0K0K1C4 114 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 C9JQL5 133 aa1.27□□□□□ -2.21
CPSF6-207ENST00000551516 K7EN84 100 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms