RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SDIM1Q6ZPB5 146 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 C9orf163Q8N9P6 203 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 NUP35Q8NFH5 326 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 CHAC1Q9BUX1 264 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 TPPP3Q9BW30 176 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 NIT2Q9NQR4 276 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 OSTCQ9NRP0 149 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 IGHV1-24A0A0C4DH33 117 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 SMIM27A0A1W2PRY6 76 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 HIGD1CA8MV81 97 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 F2Z2F3 143 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 IFNA1P01562 189 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 HLA-DQA1P01909 254 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 ANGP03950 147 aaKnown RBP3.02□□□□□ -1.93
SCAF11-214ENST00000550893 INAFM2P0DMQ5 153 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 RAB4AP20338 218 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 REG3AQ06141 175 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 MIAQ16674 131 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 LBHQ53QV2 105 aaPredicted RBP3.02□□□□□ -1.93
SCAF11-214ENST00000550893 EIF5AL1Q6IS14 154 aaKnown RBP3.02□□□□□ -1.93
SCAF11-214ENST00000550893 TEX261Q6UWH6 196 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 AMN1Q8IY45 258 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 TSKUQ8WUA8 353 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 SMIM7Q9BQ49 75 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 TMEM191AQ9H0A3 160 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 TMEM242Q9NWH2 141 aa3.02□□□□□ -1.93
SCAF11-214ENST00000550893 TRBV25-1A0A075B6N4 114 aa3.01□□□□□ -1.93
SCAF11-214ENST00000550893 A0A087WX48 190 aa3.01□□□□□ -1.93
SCAF11-214ENST00000550893 GVQW2A0A096LPI5 108 aaPredicted RBP3.01□□□□□ -1.93
SCAF11-214ENST00000550893 TRBV27A0A0K0K1C4 114 aa3.01□□□□□ -1.93
SCAF11-214ENST00000550893 PSCAO43653 123 aa3.01□□□□□ -1.93
SCAF11-214ENST00000550893 GATCO43716 136 aaKnown RBP3.01□□□□□ -1.93
SCAF11-214ENST00000550893 TRGC1P0CF51 173 aa3.01□□□□□ -1.93
SCAF11-214ENST00000550893 TAGLN2P37802 199 aaKnown RBP3.01□□□□□ -1.93
SCAF11-214ENST00000550893 MRPL51Q4U2R6 128 aaKnown RBP3.01□□□□□ -1.93
SCAF11-214ENST00000550893 Q6ZVQ6 151 aa3.01□□□□□ -1.93
SCAF11-214ENST00000550893 SPACA4Q8TDM5 124 aa3.01□□□□□ -1.93
SCAF11-214ENST00000550893 ALKBH7Q9BT30 221 aaPredicted RBP3.01□□□□□ -1.93
SCAF11-214ENST00000550893 TMEM243Q9BU79 118 aa3.01□□□□□ -1.93
SCAF11-214ENST00000550893 NPYP01303 97 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 FGF6P10767 208 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 Q0VG73 95 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 FAM74A3Q4VXF1 159 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 Q6ZUT4 128 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 LINC00173Q6ZV60 143 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 MRPL52Q86TS9 123 aaKnown RBP3□□□□□ -1.93
SCAF11-214ENST00000550893 KRTAP11-1Q8IUC1 163 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 FRZBQ92765 325 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 LINC00526Q96FQ7 95 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 UBE2D4Q9Y2X8 147 aa3□□□□□ -1.93
SCAF11-214ENST00000550893 A0A096LNI7 61 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 A0A1B0GUT8 65 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 ZNF727A8MUV8 499 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 A8MWL6 223 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 CEBPGP53567 150 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 RPL39P62891 51 aaKnown RBP2.99□□□□□ -1.93
SCAF11-214ENST00000550893 TMEM97Q5BJF2 176 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 RNASE13Q5GAN3 156 aaKnown RBP2.99□□□□□ -1.93
SCAF11-214ENST00000550893 FAM104BQ5XKR9 115 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 CHCHD10Q8WYQ3 142 aaPredicted RBP2.99□□□□□ -1.93
SCAF11-214ENST00000550893 CDC42SE2Q9NRR3 84 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 PLAC8Q9NZF1 115 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 NAT8Q9UHE5 227 aa2.99□□□□□ -1.93
SCAF11-214ENST00000550893 TRBV24-1A0A075B6N3 115 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 LINC00959A0A1B0GUT2 108 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 XKRY2A2RUG3 117 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 TMEM262E9PQX1 116 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 H7C1H1 209 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 CRPP02741 224 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 SMIM17P0DL12 118 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 KRTAP10-8P60410 259 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 RPL32P62910 135 aaKnown RBP2.98□□□□□ -1.93
SCAF11-214ENST00000550893 COTL1Q14019 142 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 ELOBQ15370 118 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 ADIRFQ15847 76 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 Q1RN00 199 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 OR5A1Q8NGJ0 315 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 RMI2Q96E14 147 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 MRAP2Q96G30 205 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 EIF5A2Q9GZV4 153 aaKnown RBP2.98□□□□□ -1.93
SCAF11-214ENST00000550893 URGCP-MRPS24S4R325 110 aa2.98□□□□□ -1.93
SCAF11-214ENST00000550893 TRAV8-4A0A0B4J246 113 aa2.97□□□□□ -1.93
SCAF11-214ENST00000550893 I3L3M4 83 aa2.97□□□□□ -1.93
SCAF11-214ENST00000550893 CCL25O15444 150 aa2.97□□□□□ -1.93
SCAF11-214ENST00000550893 APCSP02743 223 aa2.97□□□□□ -1.93
SCAF11-214ENST00000550893 TMEM241Q24JQ0 296 aa2.97□□□□□ -1.93
SCAF11-214ENST00000550893 MRPL54Q6P161 138 aaKnown RBP2.97□□□□□ -1.93
SCAF11-214ENST00000550893 SMIM2Q9BVW6 85 aa2.97□□□□□ -1.93
SCAF11-214ENST00000550893 BIN3Q9NQY0 253 aa2.97□□□□□ -1.93
SCAF11-214ENST00000550893 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 IGHV3OR16-9A0A0B4J2B5 98 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 IGKV3OR2-268A0A0C4DH90 116 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 C7orf77A4D0Y5 90 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 D6R8Y8 96 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-214ENST00000550893 ZNF25P17030 456 aaPredicted RBP2.96□□□□□ -1.94
SCAF11-214ENST00000550893 PKIAP61925 76 aa2.96□□□□□ -1.94
SCAF11-214ENST00000550893 PRR3P79522 188 aaKnown RBP2.96□□□□□ -1.94
SCAF11-214ENST00000550893 COX6A2Q02221 97 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms