RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 C4orf3Q8WVX3 66 aa6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 C11orf72Q8NBR9 251 aa6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 URB1O60287 2271 aaKnown RBP6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 UNQ9165/PRO28630Q6UXU0 137 aa6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 MAP6D1Q9H9H5 199 aa6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 SHANK1Q9Y566 2161 aa6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 C1orf64Q8NEQ6 169 aa6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 IGFL2Q6UWQ7 119 aa6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 SPATA3Q8NHX4 192 aa6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 KIAA0100Q14667 2235 aaKnown RBP6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 LINC00474Q9P2X8 69 aa6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 C14orf177Q52M58 125 aa6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 LINC00337Q8N6G1 96 aa6.32□□□□□ -1.4
PPFIA2-220ENST00000550584 KIAA2026Q5HYC2 2103 aa6.31□□□□□ -1.4
PPFIA2-220ENST00000550584 TRAV10A0A0B4J240 114 aa6.31□□□□□ -1.4
PPFIA2-220ENST00000550584 LY6G6EA0A0G2JKS1 128 aa6.31□□□□□ -1.4
PPFIA2-220ENST00000550584 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
PPFIA2-220ENST00000550584 U3KQA8 63 aa6.31□□□□□ -1.4
PPFIA2-220ENST00000550584 TRAV22A0A0B4J277 110 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 TCF20Q9UGU0 1960 aaKnown RBP6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 A0A1B0GU69 56 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 ACYP2P14621 99 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 HEATR1Q9H583 2144 aaKnown RBP6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 A6NDX4 124 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 ZFP36P26651 326 aaKnown RBP6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 TM2D3Q9BRN9 247 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 FAM215AQ9Y5M1 114 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 BPTFQ12830 3046 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 IGHV4-30-2A0A087WSY4 118 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 KIF25-AS1Q9Y6Z4 181 aa6.3□□□□□ -1.4
PPFIA2-220ENST00000550584 LINC01548A6NM66 108 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 EGFEM1PQ0D2K5 195 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 A8MUN3 132 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 PDE4DIPQ5VU43 2346 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 CACNA1IQ9P0X4 2223 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 A0A096LPF7 62 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 RBM12B-AS1Q9P1G2 102 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 COX6A2Q02221 97 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 Q6ZRU5 148 aa6.29□□□□□ -1.4
PPFIA2-220ENST00000550584 DNAJC13O75165 2243 aa6.28□□□□□ -1.4
PPFIA2-220ENST00000550584 LITAFQ99732 161 aa6.28□□□□□ -1.4
PPFIA2-220ENST00000550584 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
PPFIA2-220ENST00000550584 FAM218AQ96MZ4 157 aa6.28□□□□□ -1.4
PPFIA2-220ENST00000550584 Q6ZTI0 123 aa6.27□□□□□ -1.41
PPFIA2-220ENST00000550584 Q8N2B8 174 aa6.27□□□□□ -1.41
PPFIA2-220ENST00000550584 KLK12Q9UKR0 248 aa6.27□□□□□ -1.41
PPFIA2-220ENST00000550584 RPL37AP8A6NKH3 93 aa6.27□□□□□ -1.41
PPFIA2-220ENST00000550584 CACNA1DQ01668 2161 aa6.27□□□□□ -1.41
PPFIA2-220ENST00000550584 ZNF407Q9C0G0 2248 aa6.27□□□□□ -1.41
PPFIA2-220ENST00000550584 COL5A1P20908 1838 aaPredicted RBP6.27□□□□□ -1.41
PPFIA2-220ENST00000550584 CABIN1Q9Y6J0 2220 aa6.27□□□□□ -1.41
PPFIA2-220ENST00000550584 UNC13CQ8NB66 2214 aa6.26□□□□□ -1.41
PPFIA2-220ENST00000550584 KPRPQ5T749 579 aaPredicted RBP6.26□□□□□ -1.41
PPFIA2-220ENST00000550584 MDFIQ99750 246 aa6.26□□□□□ -1.41
PPFIA2-220ENST00000550584 Q6ZTC4 211 aa6.26□□□□□ -1.41
PPFIA2-220ENST00000550584 DOCK10Q96BY6 2186 aa6.26□□□□□ -1.41
PPFIA2-220ENST00000550584 TNFRSF13BO14836 293 aaPredicted RBP6.26□□□□□ -1.41
PPFIA2-220ENST00000550584 Q9UF83 564 aa6.26□□□□□ -1.41
PPFIA2-220ENST00000550584 SYCNQ0VAF6 134 aa6.26□□□□□ -1.41
PPFIA2-220ENST00000550584 SLURP1P55000 103 aa6.25□□□□□ -1.41
PPFIA2-220ENST00000550584 Q96MF0 132 aa6.25□□□□□ -1.41
PPFIA2-220ENST00000550584 HCFC1P51610 2035 aa6.25□□□□□ -1.41
PPFIA2-220ENST00000550584 DEFB1P60022 68 aa6.25□□□□□ -1.41
PPFIA2-220ENST00000550584 C9orf66Q5T8R8 295 aa6.25□□□□□ -1.41
PPFIA2-220ENST00000550584 MED12Q93074 2177 aa6.25□□□□□ -1.41
PPFIA2-220ENST00000550584 H3BS24 57 aa6.25□□□□□ -1.41
PPFIA2-220ENST00000550584 A0A1B0GUV1 79 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 DOPEY2Q9Y3R5 2298 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 DNAJC9-AS1A6NH13 148 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 LY6G6DO95868 133 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 ASXL3Q9C0F0 2248 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 ZNF580Q9UK33 172 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 EML5Q05BV3 1969 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 PROK1P58294 105 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 DEFB123Q8N688 67 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 TMEM105Q8N8V8 129 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 A0A0J9YWU9 116 aa6.24□□□□□ -1.41
PPFIA2-220ENST00000550584 WNK1Q9H4A3 2382 aa6.23□□□□□ -1.41
PPFIA2-220ENST00000550584 SPTBN1Q01082 2364 aaKnown RBP6.23□□□□□ -1.41
PPFIA2-220ENST00000550584 COL4A6Q14031 1691 aa6.23□□□□□ -1.41
PPFIA2-220ENST00000550584 LELP1Q5T871 98 aa6.23□□□□□ -1.41
PPFIA2-220ENST00000550584 ARHGAP21Q5T5U3 1957 aa6.23□□□□□ -1.41
PPFIA2-220ENST00000550584 ASCC3Q8N3C0 2202 aaKnown RBP6.23□□□□□ -1.41
PPFIA2-220ENST00000550584 MED12LQ86YW9 2145 aa6.23□□□□□ -1.41
PPFIA2-220ENST00000550584 PCNX3Q9H6A9 2034 aa6.23□□□□□ -1.41
PPFIA2-220ENST00000550584 FRYQ5TBA9 3013 aa6.22□□□□□ -1.41
PPFIA2-220ENST00000550584 ZZEF1O43149 2961 aa6.22□□□□□ -1.41
PPFIA2-220ENST00000550584 OBSCN-AS1Q96MR7 158 aa6.22□□□□□ -1.41
PPFIA2-220ENST00000550584 APC2O95996 2303 aa6.22□□□□□ -1.41
PPFIA2-220ENST00000550584 COA5Q86WW8 74 aa6.22□□□□□ -1.41
PPFIA2-220ENST00000550584 BDP1A6H8Y1 2624 aa6.21□□□□□ -1.41
PPFIA2-220ENST00000550584 LINC00315P59091 139 aa6.21□□□□□ -1.41
PPFIA2-220ENST00000550584 MSMPQ1L6U9 139 aa6.21□□□□□ -1.41
PPFIA2-220ENST00000550584 MYO7BQ6PIF6 2116 aa6.21□□□□□ -1.41
PPFIA2-220ENST00000550584 LINC00167Q96N53 147 aa6.21□□□□□ -1.42
PPFIA2-220ENST00000550584 ZNF702PQ9H963 129 aa6.21□□□□□ -1.42
PPFIA2-220ENST00000550584 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms