RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 FAM104BQ5XKR9 115 aa6.9□□□□□ -1.3
SMARCD1-208ENST00000550280 KIR2DL4Q99706 377 aa6.9□□□□□ -1.3
SMARCD1-208ENST00000550280 TRBV24-1A0A075B6N3 115 aa6.89□□□□□ -1.31
SMARCD1-208ENST00000550280 NDUFA1O15239 70 aa6.89□□□□□ -1.31
SMARCD1-208ENST00000550280 SRP19P09132 144 aaKnown RBP6.89□□□□□ -1.31
SMARCD1-208ENST00000550280 GAGE2EQ4V326 116 aa6.89□□□□□ -1.31
SMARCD1-208ENST00000550280 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
SMARCD1-208ENST00000550280 IMMP2LQ96T52 175 aa6.89□□□□□ -1.31
SMARCD1-208ENST00000550280 GAGE2DQ9UEU5 116 aa6.89□□□□□ -1.31
SMARCD1-208ENST00000550280 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 F8WDY8 70 aa6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 M0QXV9 152 aa6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 RPL32P62910 135 aaKnown RBP6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 BLOC1S1P78537 153 aa6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 MRPS36P82909 103 aaKnown RBP6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 RIGQ13278 110 aa6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 PRR4Q16378 134 aa6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
SMARCD1-208ENST00000550280 ZNF727A8MUV8 499 aa6.87□□□□□ -1.31
SMARCD1-208ENST00000550280 PPP1R2P9O14990 202 aa6.87□□□□□ -1.31
SMARCD1-208ENST00000550280 TNFRSF6BO95407 300 aa6.87□□□□□ -1.31
SMARCD1-208ENST00000550280 PPP1R17O96001 155 aa6.87□□□□□ -1.31
SMARCD1-208ENST00000550280 SMAGPQ0VAQ4 97 aa6.87□□□□□ -1.31
SMARCD1-208ENST00000550280 C2orf82Q6UX34 121 aa6.87□□□□□ -1.31
SMARCD1-208ENST00000550280 C20orf78Q9BR46 151 aa6.87□□□□□ -1.31
SMARCD1-208ENST00000550280 SMIM2Q9BVW6 85 aa6.87□□□□□ -1.31
SMARCD1-208ENST00000550280 TCAPO15273 167 aa6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 NPYP01303 97 aa6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 RPL23P62829 140 aaKnown RBP6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 TMEM241Q24JQ0 296 aa6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 FAM74A3Q4VXF1 159 aa6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 TMEM18Q96B42 140 aa6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
SMARCD1-208ENST00000550280 SMIM27A0A1W2PRY6 76 aa6.85□□□□□ -1.31
SMARCD1-208ENST00000550280 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
SMARCD1-208ENST00000550280 IFITM10A6NMD0 228 aa6.85□□□□□ -1.31
SMARCD1-208ENST00000550280 C9JQL5 133 aa6.85□□□□□ -1.31
SMARCD1-208ENST00000550280 LINC00242Q5T6M2 205 aa6.85□□□□□ -1.31
SMARCD1-208ENST00000550280 EIF5A2Q9GZV4 153 aaKnown RBP6.85□□□□□ -1.31
SMARCD1-208ENST00000550280 NAT8BQ9UHF3 227 aa6.85□□□□□ -1.31
SMARCD1-208ENST00000550280 D6R8Y8 96 aa6.84□□□□□ -1.31
SMARCD1-208ENST00000550280 CKS2P33552 79 aa6.84□□□□□ -1.31
SMARCD1-208ENST00000550280 UBE2BP63146 152 aa6.84□□□□□ -1.31
SMARCD1-208ENST00000550280 HBBP68871 147 aa6.84□□□□□ -1.31
SMARCD1-208ENST00000550280 IGLV4-3A0A075B6K6 122 aa6.83□□□□□ -1.32
SMARCD1-208ENST00000550280 A0A087X002 238 aa6.83□□□□□ -1.32
SMARCD1-208ENST00000550280 A0A1B0GXF2 115 aa6.83□□□□□ -1.32
SMARCD1-208ENST00000550280 NDUFC2-KCTD14E9PQ53 114 aa6.83□□□□□ -1.32
SMARCD1-208ENST00000550280 UBE2D1P51668 147 aa6.83□□□□□ -1.32
SMARCD1-208ENST00000550280 ZC2HC1BQ5TFG8 222 aa6.83□□□□□ -1.32
SMARCD1-208ENST00000550280 TRBV30A0A0K0K1B3 111 aa6.82□□□□□ -1.32
SMARCD1-208ENST00000550280 ZNF861PO60384 105 aa6.82□□□□□ -1.32
SMARCD1-208ENST00000550280 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
SMARCD1-208ENST00000550280 CARHSP1Q9Y2V2 147 aaKnown RBP6.82□□□□□ -1.32
SMARCD1-208ENST00000550280 TGIF2-C20orf24A0A0A6YYL0 155 aa6.81□□□□□ -1.32
SMARCD1-208ENST00000550280 TSPAN13O95857 204 aa6.81□□□□□ -1.32
SMARCD1-208ENST00000550280 SRSF3P84103 164 aaKnown RBP6.81□□□□□ -1.32
SMARCD1-208ENST00000550280 ADIRFQ15847 76 aa6.81□□□□□ -1.32
SMARCD1-208ENST00000550280 MRPL54Q6P161 138 aaKnown RBP6.81□□□□□ -1.32
SMARCD1-208ENST00000550280 LINC00173Q6ZV60 143 aa6.81□□□□□ -1.32
SMARCD1-208ENST00000550280 LINC00469Q8N7U9 141 aa6.8□□□□□ -1.32
SMARCD1-208ENST00000550280 PYGO1Q9Y3Y4 419 aa6.8□□□□□ -1.32
SMARCD1-208ENST00000550280 C22orf24Q9Y442 160 aa6.8□□□□□ -1.32
SMARCD1-208ENST00000550280 A0A1B0GW15 77 aa6.78□□□□□ -1.32
SMARCD1-208ENST00000550280 IFI27P40305 119 aaPredicted RBP6.78□□□□□ -1.32
SMARCD1-208ENST00000550280 TMEM141Q96I45 108 aa6.78□□□□□ -1.32
SMARCD1-208ENST00000550280 CTDSP1Q9GZU7 261 aa6.78□□□□□ -1.32
SMARCD1-208ENST00000550280 XAGE1AQ9HD64 81 aa6.78□□□□□ -1.32
SMARCD1-208ENST00000550280 NAT8Q9UHE5 227 aa6.78□□□□□ -1.32
SMARCD1-208ENST00000550280 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
SMARCD1-208ENST00000550280 AKAP14Q86UN6 197 aa6.77□□□□□ -1.33
SMARCD1-208ENST00000550280 LINC01561Q8N1V8 128 aa6.77□□□□□ -1.33
SMARCD1-208ENST00000550280 PACRGQ96M98 296 aaPredicted RBP6.77□□□□□ -1.33
SMARCD1-208ENST00000550280 AMELXQ99217 191 aa6.77□□□□□ -1.33
SMARCD1-208ENST00000550280 ANAPC11Q9NYG5 84 aa6.77□□□□□ -1.33
SMARCD1-208ENST00000550280 PRSS47A8MTI9 375 aa6.76□□□□□ -1.33
SMARCD1-208ENST00000550280 NUPR1O60356 82 aa6.76□□□□□ -1.33
SMARCD1-208ENST00000550280 PRELID3AQ96N28 172 aa6.76□□□□□ -1.33
SMARCD1-208ENST00000550280 hCG_2014768A0A024R1R8 64 aa6.75□□□□□ -1.33
SMARCD1-208ENST00000550280 A0A0U1RQV1 116 aa6.75□□□□□ -1.33
SMARCD1-208ENST00000550280 PPBPP02775 128 aa6.75□□□□□ -1.33
SMARCD1-208ENST00000550280 TEX43Q6ZNM6 134 aa6.75□□□□□ -1.33
SMARCD1-208ENST00000550280 TMEM136Q6ZRR5 245 aa6.75□□□□□ -1.33
SMARCD1-208ENST00000550280 FAM19A3Q7Z5A8 133 aa6.75□□□□□ -1.33
SMARCD1-208ENST00000550280 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
SMARCD1-208ENST00000550280 KRTAP9-6A0A140TA67 174 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 IGIPA6NJ69 53 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 F8W036 122 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 RAB5AP20339 215 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 C2orf66Q6UXQ4 117 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 KRTAP13-1Q8IUC0 172 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 Q8IZM0 81 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 RETNLBQ9BQ08 111 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 TOMM7Q9P0U1 55 aa6.74□□□□□ -1.33
SMARCD1-208ENST00000550280 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
SMARCD1-208ENST00000550280 BCE1O60756 84 aa6.73□□□□□ -1.33
SMARCD1-208ENST00000550280 Q6ZN92 141 aa6.73□□□□□ -1.33
SMARCD1-208ENST00000550280 MRPL55Q7Z7F7 128 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms