RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 PLA2G10O15496 165 aa3.7□□□□□ -1.82
LIN7A-202ENST00000549417 IGLC6P0CF74 106 aa3.7□□□□□ -1.82
LIN7A-202ENST00000549417 SPAG11AQ6PDA7 123 aa3.7□□□□□ -1.82
LIN7A-202ENST00000549417 LYZL1Q6UWQ5 148 aa3.7□□□□□ -1.82
LIN7A-202ENST00000549417 BAGE2Q86Y30 109 aa3.7□□□□□ -1.82
LIN7A-202ENST00000549417 NKX6-2Q9C056 277 aaPredicted RBP3.7□□□□□ -1.82
LIN7A-202ENST00000549417 RNASE7Q9H1E1 156 aaKnown RBP3.7□□□□□ -1.82
LIN7A-202ENST00000549417 XAGE1AQ9HD64 81 aa3.7□□□□□ -1.82
LIN7A-202ENST00000549417 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
LIN7A-202ENST00000549417 LYRM1O43325 122 aa3.69□□□□□ -1.82
LIN7A-202ENST00000549417 MPC2O95563 127 aa3.69□□□□□ -1.82
LIN7A-202ENST00000549417 MBP02144 154 aa3.69□□□□□ -1.82
LIN7A-202ENST00000549417 IL7P13232 177 aa3.69□□□□□ -1.82
LIN7A-202ENST00000549417 FOXA3P55318 350 aaPredicted RBP3.69□□□□□ -1.82
LIN7A-202ENST00000549417 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
LIN7A-202ENST00000549417 MRPL55Q7Z7F7 128 aaKnown RBP3.69□□□□□ -1.82
LIN7A-202ENST00000549417 MRPL52Q86TS9 123 aaKnown RBP3.69□□□□□ -1.82
LIN7A-202ENST00000549417 KRTAP13-1Q8IUC0 172 aa3.69□□□□□ -1.82
LIN7A-202ENST00000549417 KIR2DL4Q99706 377 aa3.69□□□□□ -1.82
LIN7A-202ENST00000549417 F8WDY8 70 aa3.68□□□□□ -1.82
LIN7A-202ENST00000549417 NOL3O60936 208 aaKnown RBP3.68□□□□□ -1.82
LIN7A-202ENST00000549417 H2BFSP57053 126 aa3.68□□□□□ -1.82
LIN7A-202ENST00000549417 PRLHP81277 87 aa3.68□□□□□ -1.82
LIN7A-202ENST00000549417 TWIST1Q15672 202 aa3.68□□□□□ -1.82
LIN7A-202ENST00000549417 Q6ZUT4 128 aa3.68□□□□□ -1.82
LIN7A-202ENST00000549417 Q8NBF4 154 aa3.68□□□□□ -1.82
LIN7A-202ENST00000549417 PACRGQ96M98 296 aaPredicted RBP3.68□□□□□ -1.82
LIN7A-202ENST00000549417 LINC00167Q96N53 147 aa3.68□□□□□ -1.82
LIN7A-202ENST00000549417 PSMG3Q9BT73 122 aaPredicted RBP3.68□□□□□ -1.82
LIN7A-202ENST00000549417 NDUFA12Q9UI09 145 aa3.68□□□□□ -1.82
LIN7A-202ENST00000549417 CTXND1A0A1B0GTU2 59 aa3.67□□□□□ -1.82
LIN7A-202ENST00000549417 C7orf77A4D0Y5 90 aa3.67□□□□□ -1.82
LIN7A-202ENST00000549417 CFC1P0CG37 223 aa3.67□□□□□ -1.82
LIN7A-202ENST00000549417 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
LIN7A-202ENST00000549417 CYTL1Q9NRR1 136 aa3.67□□□□□ -1.82
LIN7A-202ENST00000549417 TNFSF18Q9UNG2 199 aa3.67□□□□□ -1.82
LIN7A-202ENST00000549417 TRBV30A0A0K0K1B3 111 aa3.66□□□□□ -1.82
LIN7A-202ENST00000549417 ZNF727A8MUV8 499 aa3.66□□□□□ -1.82
LIN7A-202ENST00000549417 PAGE4O60829 102 aa3.66□□□□□ -1.82
LIN7A-202ENST00000549417 UPK1BO75841 260 aa3.66□□□□□ -1.82
LIN7A-202ENST00000549417 TNFRSF6BO95407 300 aa3.66□□□□□ -1.82
LIN7A-202ENST00000549417 PET100P0DJ07 73 aa3.66□□□□□ -1.82
LIN7A-202ENST00000549417 SERF2P84101 59 aa3.66□□□□□ -1.82
LIN7A-202ENST00000549417 KIAA0087Q14695 138 aa3.66□□□□□ -1.82
LIN7A-202ENST00000549417 IGHV3OR16-9A0A0B4J2B5 98 aa3.65□□□□□ -1.83
LIN7A-202ENST00000549417 MAP1LC3B2A6NCE7 125 aa3.65□□□□□ -1.83
LIN7A-202ENST00000549417 F2Z2F3 143 aa3.65□□□□□ -1.83
LIN7A-202ENST00000549417 IFNA1P01562 189 aa3.65□□□□□ -1.83
LIN7A-202ENST00000549417 RPS20P60866 119 aaKnown RBP3.65□□□□□ -1.83
LIN7A-202ENST00000549417 RPL32P62910 135 aaKnown RBP3.65□□□□□ -1.83
LIN7A-202ENST00000549417 PNRC1Q12796 327 aaPredicted RBP3.65□□□□□ -1.83
LIN7A-202ENST00000549417 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
LIN7A-202ENST00000549417 MAP1LC3BQ9GZQ8 125 aa3.65□□□□□ -1.83
LIN7A-202ENST00000549417 ST20Q9HBF5 79 aa3.65□□□□□ -1.83
LIN7A-202ENST00000549417 TP73-AS1Q9UF72 201 aa3.65□□□□□ -1.83
LIN7A-202ENST00000549417 IGKV2-28A0A075B6P5 120 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 A0A1B0GV50 99 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 FAM240BA0A1B0GVZ2 78 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 C9orf92A6NGG3 77 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 SCO1O75880 301 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 IGKV2D-28P01615 120 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 S100A9P06702 114 aaKnown RBP3.64□□□□□ -1.83
LIN7A-202ENST00000549417 FHITP49789 147 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 Q6Q795 121 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 FAM19A1Q7Z5A9 133 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 Q8N377 158 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 PLEKHB2Q96CS7 222 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 TCEAL7Q9BRU2 100 aa3.64□□□□□ -1.83
LIN7A-202ENST00000549417 SPINK1P00995 79 aa3.63□□□□□ -1.83
LIN7A-202ENST00000549417 FCER1GP30273 86 aa3.63□□□□□ -1.83
LIN7A-202ENST00000549417 RPL35P42766 123 aaKnown RBP3.63□□□□□ -1.83
LIN7A-202ENST00000549417 TMUB2Q71RG4 321 aa3.63□□□□□ -1.83
LIN7A-202ENST00000549417 CCDC32Q9BV29 185 aa3.63□□□□□ -1.83
LIN7A-202ENST00000549417 TRBV6-5A0A0K0K1A5 114 aa3.62□□□□□ -1.83
LIN7A-202ENST00000549417 XKRY2A2RUG3 117 aa3.62□□□□□ -1.83
LIN7A-202ENST00000549417 AKR1C8PQ5T2L2 129 aa3.62□□□□□ -1.83
LIN7A-202ENST00000549417 TEX261Q6UWH6 196 aa3.62□□□□□ -1.83
LIN7A-202ENST00000549417 SMIM15Q7Z3B0 74 aa3.62□□□□□ -1.83
LIN7A-202ENST00000549417 C9orf62Q8N4C0 152 aa3.62□□□□□ -1.83
LIN7A-202ENST00000549417 CSDC2Q9Y534 153 aaKnown RBP3.62□□□□□ -1.83
LIN7A-202ENST00000549417 TGIF2-C20orf24A0A0A6YYL0 155 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 TRBV27A0A0K0K1C4 114 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 IFITM10A6NMD0 228 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 TMEM238C9JI98 176 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 POLR2KP53803 58 aaKnown RBP3.61□□□□□ -1.83
LIN7A-202ENST00000549417 RPL39P62891 51 aaKnown RBP3.61□□□□□ -1.83
LIN7A-202ENST00000549417 CENPWQ5EE01 88 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 RPL7L1Q6DKI1 246 aaKnown RBP3.61□□□□□ -1.83
LIN7A-202ENST00000549417 CBLN2Q8IUK8 224 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 FAM19A2Q8N3H0 131 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 FAM104AQ969W3 186 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 HIGD2AQ9BW72 106 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 TOMM7Q9P0U1 55 aa3.61□□□□□ -1.83
LIN7A-202ENST00000549417 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
LIN7A-202ENST00000549417 RAB19A4D1S5 217 aa3.6□□□□□ -1.83
LIN7A-202ENST00000549417 SSNA1O43805 119 aa3.6□□□□□ -1.83
LIN7A-202ENST00000549417 PFDN1O60925 122 aa3.6□□□□□ -1.83
LIN7A-202ENST00000549417 CKS1BP61024 79 aa3.6□□□□□ -1.83
LIN7A-202ENST00000549417 SMAGPQ0VAQ4 97 aa3.6□□□□□ -1.83
LIN7A-202ENST00000549417 SPRR4Q96PI1 79 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms