RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 FAM218AQ96MZ4 157 aa10.05□□□□□ -0.8
RAPGEF3-218ENST00000548919 UBR5O95071 2799 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF3-218ENST00000548919 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
RAPGEF3-218ENST00000548919 FAM240AA0A1B0GVK7 77 aa10.04□□□□□ -0.8
RAPGEF3-218ENST00000548919 DAZ2Q13117 558 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-218ENST00000548919 DAZ4Q86SG3 579 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-218ENST00000548919 DAZ3Q9NR90 486 aaKnown RBP10.04□□□□□ -0.8
RAPGEF3-218ENST00000548919 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
RAPGEF3-218ENST00000548919 CSDC2Q9Y534 153 aaKnown RBP10.03□□□□□ -0.8
RAPGEF3-218ENST00000548919 PLA2G2AP14555 144 aa10.03□□□□□ -0.8
RAPGEF3-218ENST00000548919 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
RAPGEF3-218ENST00000548919 WFDC10AQ9H1F0 79 aa10.03□□□□□ -0.8
RAPGEF3-218ENST00000548919 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
RAPGEF3-218ENST00000548919 UBE2L6O14933 153 aa10.02□□□□□ -0.81
RAPGEF3-218ENST00000548919 SMCR5Q8TEV8 140 aa10.02□□□□□ -0.81
RAPGEF3-218ENST00000548919 BAALC-AS2P0C853 105 aa10.01□□□□□ -0.81
RAPGEF3-218ENST00000548919 Q9HAA7 133 aa10.01□□□□□ -0.81
RAPGEF3-218ENST00000548919 TOMM7Q9P0U1 55 aa10.01□□□□□ -0.81
RAPGEF3-218ENST00000548919 MRPL23Q16540 153 aaKnown RBP10.01□□□□□ -0.81
RAPGEF3-218ENST00000548919 TMEM243Q9BU79 118 aa10□□□□□ -0.81
RAPGEF3-218ENST00000548919 C22orf24Q9Y442 160 aa10□□□□□ -0.81
RAPGEF3-218ENST00000548919 USP24Q9UPU5 2620 aa10□□□□□ -0.81
RAPGEF3-218ENST00000548919 FLNAP21333 2647 aaKnown RBP10□□□□□ -0.81
RAPGEF3-218ENST00000548919 COPS9Q8WXC6 57 aa10□□□□□ -0.81
RAPGEF3-218ENST00000548919 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
RAPGEF3-218ENST00000548919 GIG44P09565 113 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF3-218ENST00000548919 CCL24O00175 119 aa9.99□□□□□ -0.81
RAPGEF3-218ENST00000548919 HERV-K104P63124 156 aa9.99□□□□□ -0.81
RAPGEF3-218ENST00000548919 MIR7-3HGQ8N6C7 128 aa9.99□□□□□ -0.81
RAPGEF3-218ENST00000548919 RPL35AP18077 110 aaKnown RBP9.98□□□□□ -0.81
RAPGEF3-218ENST00000548919 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
RAPGEF3-218ENST00000548919 C3orf56Q8N813 242 aa9.98□□□□□ -0.81
RAPGEF3-218ENST00000548919 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 PLAC8L1A1L4L8 177 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 IGLV4-60A0A075B6I1 120 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 TRACP01848 142 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 DEFB113Q30KQ7 82 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 COX7B2Q8TF08 81 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 NBEAL2Q6ZNJ1 2754 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 HIST2H2BCQ6DN03 193 aa9.97□□□□□ -0.81
RAPGEF3-218ENST00000548919 TRAV25A0A0B4J276 109 aa9.96□□□□□ -0.81
RAPGEF3-218ENST00000548919 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.82
RAPGEF3-218ENST00000548919 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.82
RAPGEF3-218ENST00000548919 DNAJC9-AS1A6NH13 148 aa9.96□□□□□ -0.82
RAPGEF3-218ENST00000548919 CRPP02741 224 aa9.96□□□□□ -0.82
RAPGEF3-218ENST00000548919 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.82
RAPGEF3-218ENST00000548919 LINC00158P58513 81 aa9.95□□□□□ -0.82
RAPGEF3-218ENST00000548919 MTORP42345 2549 aa9.95□□□□□ -0.82
RAPGEF3-218ENST00000548919 GCN1Q92616 2671 aaKnown RBP9.95□□□□□ -0.82
RAPGEF3-218ENST00000548919 FN1P02751 2386 aaKnown RBP9.95□□□□□ -0.82
RAPGEF3-218ENST00000548919 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
RAPGEF3-218ENST00000548919 ACYP1P07311 99 aa9.94□□□□□ -0.82
RAPGEF3-218ENST00000548919 ESM1Q9NQ30 184 aa9.94□□□□□ -0.82
RAPGEF3-218ENST00000548919 A0A087WYN8 130 aa9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 TRAV13-2A0A0B4J235 113 aa9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 PFN2P35080 140 aa9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 C9orf129Q5T035 196 aaKnown RBP9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 GAGE2AQ6NT46 116 aa9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 ACANP16112 2415 aa9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 RPL28P46779 137 aaKnown RBP9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 BBC3Q96PG8 261 aaPredicted RBP9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 C11orf68Q9H3H3 251 aaKnown RBP9.93□□□□□ -0.82
RAPGEF3-218ENST00000548919 MALP21145 153 aa9.92□□□□□ -0.82
RAPGEF3-218ENST00000548919 CCL18P55774 89 aa9.92□□□□□ -0.82
RAPGEF3-218ENST00000548919 KRTAP1-3Q8IUG1 177 aa9.92□□□□□ -0.82
RAPGEF3-218ENST00000548919 C16orf74Q96GX8 76 aa9.92□□□□□ -0.82
RAPGEF3-218ENST00000548919 ATP5G1P05496 136 aa9.92□□□□□ -0.82
RAPGEF3-218ENST00000548919 IGHV3OR16-9A0A0B4J2B5 98 aa9.91□□□□□ -0.82
RAPGEF3-218ENST00000548919 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
RAPGEF3-218ENST00000548919 LINC00643Q86TS7 51 aa9.91□□□□□ -0.82
RAPGEF3-218ENST00000548919 TRBV6-8A0A0A6YYG3 113 aa9.9□□□□□ -0.83
RAPGEF3-218ENST00000548919 PF4P02776 101 aa9.89□□□□□ -0.83
RAPGEF3-218ENST00000548919 FHL2Q14192 279 aa9.89□□□□□ -0.83
RAPGEF3-218ENST00000548919 FAM222AQ5U5X8 452 aa9.89□□□□□ -0.83
RAPGEF3-218ENST00000548919 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
RAPGEF3-218ENST00000548919 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
RAPGEF3-218ENST00000548919 WFDC11Q8NEX6 87 aa9.89□□□□□ -0.83
RAPGEF3-218ENST00000548919 DNAL4O96015 105 aa9.88□□□□□ -0.83
RAPGEF3-218ENST00000548919 SDIM1Q6ZPB5 146 aa9.88□□□□□ -0.83
RAPGEF3-218ENST00000548919 C14orf132Q9NPU4 83 aa9.88□□□□□ -0.83
RAPGEF3-218ENST00000548919 C19orf73Q9NVV2 129 aa9.88□□□□□ -0.83
RAPGEF3-218ENST00000548919 PAX4O43316 350 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 INAFM2P0DMQ5 153 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 DEFB130BP0DP73 79 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 DEFB130AP0DP74 79 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 TMEM86BQ8N661 226 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 SLPIP03973 132 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 PPDPFQ9H3Y8 114 aa9.87□□□□□ -0.83
RAPGEF3-218ENST00000548919 A0A087WZ39 114 aa9.86□□□□□ -0.83
RAPGEF3-218ENST00000548919 LECT2O14960 151 aa9.86□□□□□ -0.83
RAPGEF3-218ENST00000548919 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
RAPGEF3-218ENST00000548919 CLPSL2Q6UWE3 100 aa9.86□□□□□ -0.83
RAPGEF3-218ENST00000548919 XCL1P47992 114 aa9.86□□□□□ -0.83
RAPGEF3-218ENST00000548919 IBA57-AS1B1ANH7 110 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms