RNA–Protein interactions for RNA: ENST00000548735.1

KRT6A-202, Transcript of keratin 6A, humanhuman

TSL 2

Gene KRT6A, Length 227 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-202ENST00000548735 FOXA3P55318 350 aaPredicted RBP5.72□□□□□ -1.49
KRT6A-202ENST00000548735 TPRXLQ17RH7 258 aa5.72□□□□□ -1.49
KRT6A-202ENST00000548735 TMEM191AQ9H0A3 160 aa5.72□□□□□ -1.49
KRT6A-202ENST00000548735 TMA7Q9Y2S6 64 aaKnown RBP5.72□□□□□ -1.49
KRT6A-202ENST00000548735 TRBV30A0A0K0K1B3 111 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 CRYGAP11844 174 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 CTAG1AP78358 180 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 GAGE2EQ4V326 116 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 Q6ZUT4 128 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 FAM231DQ6ZW35 169 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 CDIP1Q9H305 208 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 C6orf48Q9UBA6 75 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 GAGE2DQ9UEU5 116 aa5.71□□□□□ -1.5
KRT6A-202ENST00000548735 IGHV3OR16-9A0A0B4J2B5 98 aa5.7□□□□□ -1.5
KRT6A-202ENST00000548735 A0A1B0GUT8 65 aa5.7□□□□□ -1.5
KRT6A-202ENST00000548735 NDUFC2-KCTD14E9PQ53 114 aa5.7□□□□□ -1.5
KRT6A-202ENST00000548735 K7EN84 100 aa5.7□□□□□ -1.5
KRT6A-202ENST00000548735 GATCO43716 136 aaKnown RBP5.7□□□□□ -1.5
KRT6A-202ENST00000548735 SUMO2P61956 95 aaKnown RBP5.7□□□□□ -1.5
KRT6A-202ENST00000548735 RNASE13Q5GAN3 156 aaKnown RBP5.7□□□□□ -1.5
KRT6A-202ENST00000548735 TGIF2-C20orf24A0A0A6YYL0 155 aa5.69□□□□□ -1.5
KRT6A-202ENST00000548735 RPL28P46779 137 aaKnown RBP5.69□□□□□ -1.5
KRT6A-202ENST00000548735 LBHQ53QV2 105 aaPredicted RBP5.69□□□□□ -1.5
KRT6A-202ENST00000548735 C10orf25Q5T742 122 aa5.69□□□□□ -1.5
KRT6A-202ENST00000548735 UNQ6190/PRO20217Q6UXQ8 127 aa5.69□□□□□ -1.5
KRT6A-202ENST00000548735 OCC1Q8TAD7 63 aa5.69□□□□□ -1.5
KRT6A-202ENST00000548735 PACRGQ96M98 296 aaPredicted RBP5.69□□□□□ -1.5
KRT6A-202ENST00000548735 SPANXA1Q9NS26 97 aa5.69□□□□□ -1.5
KRT6A-202ENST00000548735 RAB4AP20338 218 aa5.68□□□□□ -1.5
KRT6A-202ENST00000548735 HBBP68871 147 aa5.68□□□□□ -1.5
KRT6A-202ENST00000548735 MRPS36P82909 103 aaKnown RBP5.68□□□□□ -1.5
KRT6A-202ENST00000548735 CLLU1Q5K131 121 aa5.68□□□□□ -1.5
KRT6A-202ENST00000548735 KRTAP7-1Q8IUC3 87 aa5.68□□□□□ -1.5
KRT6A-202ENST00000548735 HIGD1CA8MV81 97 aa5.67□□□□□ -1.5
KRT6A-202ENST00000548735 TMEM250H0YL14 139 aa5.67□□□□□ -1.5
KRT6A-202ENST00000548735 RAB14P61106 215 aa5.67□□□□□ -1.5
KRT6A-202ENST00000548735 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
KRT6A-202ENST00000548735 AMN1Q8IY45 258 aa5.67□□□□□ -1.5
KRT6A-202ENST00000548735 A0A087X002 238 aa5.66□□□□□ -1.5
KRT6A-202ENST00000548735 IFITM10A6NMD0 228 aa5.66□□□□□ -1.5
KRT6A-202ENST00000548735 SMLR1H3BR10 107 aa5.66□□□□□ -1.5
KRT6A-202ENST00000548735 RPL32P62910 135 aaKnown RBP5.66□□□□□ -1.5
KRT6A-202ENST00000548735 C9orf129Q5T035 196 aaKnown RBP5.66□□□□□ -1.5
KRT6A-202ENST00000548735 NRACQ8N912 160 aa5.66□□□□□ -1.5
KRT6A-202ENST00000548735 C20orf78Q9BR46 151 aa5.66□□□□□ -1.5
KRT6A-202ENST00000548735 TP73-AS1Q9UF72 201 aa5.66□□□□□ -1.5
KRT6A-202ENST00000548735 BCE1O60756 84 aa5.65□□□□□ -1.5
KRT6A-202ENST00000548735 RIGQ13278 110 aa5.65□□□□□ -1.5
KRT6A-202ENST00000548735 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
KRT6A-202ENST00000548735 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.5
KRT6A-202ENST00000548735 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
KRT6A-202ENST00000548735 CTDSP1Q9GZU7 261 aa5.65□□□□□ -1.5
KRT6A-202ENST00000548735 IGLV7-46A0A075B6I9 117 aa5.64□□□□□ -1.51
KRT6A-202ENST00000548735 LINC01547P58512 204 aaPredicted RBP5.64□□□□□ -1.51
KRT6A-202ENST00000548735 FAM229BQ4G0N7 80 aa5.64□□□□□ -1.51
KRT6A-202ENST00000548735 LINC00173Q6ZV60 143 aa5.64□□□□□ -1.51
KRT6A-202ENST00000548735 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
KRT6A-202ENST00000548735 TRBV24-1A0A075B6N3 115 aa5.63□□□□□ -1.51
KRT6A-202ENST00000548735 SMKR1H3BMG3 65 aa5.63□□□□□ -1.51
KRT6A-202ENST00000548735 PRSS2P07478 247 aa5.63□□□□□ -1.51
KRT6A-202ENST00000548735 RPL39P62891 51 aaKnown RBP5.63□□□□□ -1.51
KRT6A-202ENST00000548735 COMMD7Q86VX2 200 aa5.63□□□□□ -1.51
KRT6A-202ENST00000548735 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
KRT6A-202ENST00000548735 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
KRT6A-202ENST00000548735 ZNF727A8MUV8 499 aa5.62□□□□□ -1.51
KRT6A-202ENST00000548735 IFI27P40305 119 aaPredicted RBP5.62□□□□□ -1.51
KRT6A-202ENST00000548735 MRPL55Q7Z7F7 128 aaKnown RBP5.62□□□□□ -1.51
KRT6A-202ENST00000548735 RETNLBQ9BQ08 111 aa5.62□□□□□ -1.51
KRT6A-202ENST00000548735 SMIM2Q9BVW6 85 aa5.62□□□□□ -1.51
KRT6A-202ENST00000548735 OSTCQ9NRP0 149 aa5.62□□□□□ -1.51
KRT6A-202ENST00000548735 CKS1BP61024 79 aa5.61□□□□□ -1.51
KRT6A-202ENST00000548735 FAM104BQ5XKR9 115 aa5.61□□□□□ -1.51
KRT6A-202ENST00000548735 C2orf82Q6UX34 121 aa5.61□□□□□ -1.51
KRT6A-202ENST00000548735 FAM104AQ969W3 186 aa5.61□□□□□ -1.51
KRT6A-202ENST00000548735 IGKV2D-26A0A0A0MRZ7 120 aa5.6□□□□□ -1.51
KRT6A-202ENST00000548735 A0A1B0GW15 77 aa5.6□□□□□ -1.51
KRT6A-202ENST00000548735 CKS2P33552 79 aa5.6□□□□□ -1.51
KRT6A-202ENST00000548735 LINC00242Q5T6M2 205 aa5.6□□□□□ -1.51
KRT6A-202ENST00000548735 LINC01551Q86U37 167 aa5.6□□□□□ -1.51
KRT6A-202ENST00000548735 C2orf88Q9BSF0 95 aa5.6□□□□□ -1.51
KRT6A-202ENST00000548735 PYGO1Q9Y3Y4 419 aa5.6□□□□□ -1.51
KRT6A-202ENST00000548735 S100A12P80511 92 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 MRPL51Q4U2R6 128 aaKnown RBP5.59□□□□□ -1.51
KRT6A-202ENST00000548735 KRTAP13-2Q52LG2 175 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 Q6ZN92 141 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 TEX43Q6ZNM6 134 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 FP248Q71RG6 208 aaPredicted RBP5.59□□□□□ -1.51
KRT6A-202ENST00000548735 Q8IZM0 81 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 TMEM141Q96I45 108 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 SMIM7Q9BQ49 75 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 PPDPFQ9H3Y8 114 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 NAT8BQ9UHF3 227 aa5.59□□□□□ -1.51
KRT6A-202ENST00000548735 TNFRSF6BO95407 300 aa5.58□□□□□ -1.52
KRT6A-202ENST00000548735 PPBPP02775 128 aa5.58□□□□□ -1.52
KRT6A-202ENST00000548735 S100A8P05109 93 aa5.58□□□□□ -1.52
KRT6A-202ENST00000548735 RAB5AP20339 215 aa5.58□□□□□ -1.52
KRT6A-202ENST00000548735 CXCL5P42830 114 aa5.58□□□□□ -1.52
KRT6A-202ENST00000548735 UBE2AP49459 152 aa5.58□□□□□ -1.52
KRT6A-202ENST00000548735 LINC00469Q8N7U9 141 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms